Parental gene: | NOD2, ENSCJAG00000001786 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 20:4516353..4535016(+) |
>ENSCJAG00000001786
ATGAGGAGGAAAGAGCAGGTGTCCTCCCTCGAACATTCCCCAGGTTGTGAAATGTGCTCGCAGGAGGCTTTTCAGGCACA
GAGGAGCCAGCTGGTGGAGCTTTTGGTCTCGGGATCCCTGGAGGGCTTCGAGAGCGTCCTGGACTGGCTGCTCTCCTGGG
AAGTCCTCTCCTGGGAAGACTACGAGGGCTTCCACATCCTGGGCCAGCCTCTCTCCCACTTGGCCAGGCGCCTCCTGGAT
ACTGTCTGGAATAAGGGTACTTGGGCCTGTCAGAAACTCATCACAGCTGTCCAGGAAGTGCAGGCTGACAGCCGGACCCC
CAAGCTGCATGGCTGCTGGCACCCCTACTCACTCCACCCAGCCCAAGACCTGCAGAGTCACCGGCCAGCCATTGTCAGGA
GGCTCCACAGCCATGTGGAGGGCGTGCTGGACCTGGCATGTGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGAAATC
AGGCTGCCGATCTTCACACCGTCCCAGAGGGCCAGAAGGCTGCTCGATCTTGCCACAGTGAAGGCGAATGGATTGGCTGC
CTTCCTTCTACAGCATGTTCAAGAATTACCAGTCCCGTTGGCCCTACCTTTGGAAGCTGCCACATGCAAGAAGTACATGG
CCAAGCTGAGGACCACAGTGTCTGCTCAGTCCCGCTTCCTCAGTACCTATGACGGGGCAGAGACGCTCTGCCTGGAGGAC
ATATACACAGAGAATGTCCTGGAGGTCTGGGCGGATGTGGGCGTGGCTGGACTCCCGCAGAAGAGCCCGGCCACTCTGGG
GCTGGAGGAGCTCTTCAGCACCCCTGGCCACCTCAGTGACGATGCAGACACTGTGCTGGTAGTGGGCGAGGCGGGCAGCG
GCAAGAGCACGCTCCTGCAGCGGCTGCACTTGCTGTGGGCTGCTGGGCGAGACTTCCAGGAATTTCTCTTTGTCTTCCCA
TTCAGCTGCCGGCAGCTGCAGTGCGTGGTCAAACCACTCTCTGTGCAGATGCTACTCTTTGAGCACTGCTGTTGGCCCGA
CGTTGATCAACAGGACATCTTTCAGTTTCTCCTTGACCACCCTGACCGTGTCCTGCTAACCTTTGATGGCTTTGACGAGT
TCAAGTTCAGGTTCTCGGATCGCGAGCGTCACTGCTCCCCGACGGACCCCACCTCTGTCCAGACTCTGCTCTTTAACCTT
CTGCAGGTCAACCTGCTGAAGAATGCCCGCAAGGTGGTGACCAGCCGTCCTGCTTCCATGTCGGCGTTCCTCAGAAAGTA
CATCCACACCGAGTTCATCCTCAAGGGCTTCTCCAAAGAGGGCATCGAGCTGTACTTGAGGAAGCGCCATCATGATCCTG
GAGTGGCAGACCGCCTCATTCGCCTGCTCCAAGCGTCCTCAGCCCTGAGTGGTTTGTGCCACCTTCCTGTGTTCTCATGG
ATGGTGTCCAAATGCCACCAGGAACTCATGCTCCTGCAGCGGCGGGGGGGATCCCCGAAGACCACTACAGATATGTACCT
GCTGATCCTGCAGCATTTTCTGCTGCATGCCATCCCCCCAGACTCAGCCTGCCACATTCTGGGACCCAGTCTCCTTCTGG
GCTGCCTCCCCACACTTCTGCGCCTCGGCAGACTTGCTCTCTGGGGCCTGGGCATGTGCTGCTATGTGTTCTCAGCCCAG
CAGCTCCAGGCAGCACAGGTCAGTCCTGATGACATTTCTCTTGGCTTCCTGGTATGTGCCAAAGGTGTCATGCCAGAGAG
TACAGTGCCTCTGGAATTCCTGCACATCACTTTCCAGTGCTTCTTTGCTGCGTTCTACCTGGCACTCAGTGCTGATGTGC
CGCCAGCCTTGCTCAGACACCTCTTCAATTGTGGCAGGCCAGGCAACTCACCAATGGCCAGGCTCCTGCCCATGTTGTGC
ATCCAGGGCTCGCGGGGGAAGGATGGCAGCGTGGCAGCTTTGCTGCAGAAGACTGAGCCGCACAACCTTCAGATCACGGC
AGCCTTCCTGGCGGGGCTGTTGTCCTGGGAGCACTGGGGCCTGCTGGCCGAGTGCCAGGCATCCAAGAAGGCCCTGCTCC
AGCGCCAGGCCTGTGCCCGCTGGTGTCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGCCGCGCCAGGT
GAGGCCAAGAGCATGCACGCCATGCCCAGGTTCATCTGGCTCCTCCGGAGCCTATATGAGATGCAGGATGAGCGGCTGGC
ACGGAAGGCTGTACGTGGCCTGAATGTCGGGCACCTCAAGTTGACATTTTGCAGCGTGGGCCCCACTGAGTGTGCTGCTC
TGGCCTTCGTGCTGCGGCACCTCCAGCGGCCCGTGGCCCTGCAGCTGGACTACAACTCTGTGGGTGACATTGGCGTGGAG
CAGCTGCTGCCTTGCCTTGGTGTCTGCAAGGCTCTGTAG
ATGAGGAGGAAAGAGCAGGTGTCCTCCCTCGAACATTCCCCAGGTTGTGAAATGTGCTCGCAGGAGGCTTTTCAGGCACA
GAGGAGCCAGCTGGTGGAGCTTTTGGTCTCGGGATCCCTGGAGGGCTTCGAGAGCGTCCTGGACTGGCTGCTCTCCTGGG
AAGTCCTCTCCTGGGAAGACTACGAGGGCTTCCACATCCTGGGCCAGCCTCTCTCCCACTTGGCCAGGCGCCTCCTGGAT
ACTGTCTGGAATAAGGGTACTTGGGCCTGTCAGAAACTCATCACAGCTGTCCAGGAAGTGCAGGCTGACAGCCGGACCCC
CAAGCTGCATGGCTGCTGGCACCCCTACTCACTCCACCCAGCCCAAGACCTGCAGAGTCACCGGCCAGCCATTGTCAGGA
GGCTCCACAGCCATGTGGAGGGCGTGCTGGACCTGGCATGTGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGAAATC
AGGCTGCCGATCTTCACACCGTCCCAGAGGGCCAGAAGGCTGCTCGATCTTGCCACAGTGAAGGCGAATGGATTGGCTGC
CTTCCTTCTACAGCATGTTCAAGAATTACCAGTCCCGTTGGCCCTACCTTTGGAAGCTGCCACATGCAAGAAGTACATGG
CCAAGCTGAGGACCACAGTGTCTGCTCAGTCCCGCTTCCTCAGTACCTATGACGGGGCAGAGACGCTCTGCCTGGAGGAC
ATATACACAGAGAATGTCCTGGAGGTCTGGGCGGATGTGGGCGTGGCTGGACTCCCGCAGAAGAGCCCGGCCACTCTGGG
GCTGGAGGAGCTCTTCAGCACCCCTGGCCACCTCAGTGACGATGCAGACACTGTGCTGGTAGTGGGCGAGGCGGGCAGCG
GCAAGAGCACGCTCCTGCAGCGGCTGCACTTGCTGTGGGCTGCTGGGCGAGACTTCCAGGAATTTCTCTTTGTCTTCCCA
TTCAGCTGCCGGCAGCTGCAGTGCGTGGTCAAACCACTCTCTGTGCAGATGCTACTCTTTGAGCACTGCTGTTGGCCCGA
CGTTGATCAACAGGACATCTTTCAGTTTCTCCTTGACCACCCTGACCGTGTCCTGCTAACCTTTGATGGCTTTGACGAGT
TCAAGTTCAGGTTCTCGGATCGCGAGCGTCACTGCTCCCCGACGGACCCCACCTCTGTCCAGACTCTGCTCTTTAACCTT
CTGCAGGTCAACCTGCTGAAGAATGCCCGCAAGGTGGTGACCAGCCGTCCTGCTTCCATGTCGGCGTTCCTCAGAAAGTA
CATCCACACCGAGTTCATCCTCAAGGGCTTCTCCAAAGAGGGCATCGAGCTGTACTTGAGGAAGCGCCATCATGATCCTG
GAGTGGCAGACCGCCTCATTCGCCTGCTCCAAGCGTCCTCAGCCCTGAGTGGTTTGTGCCACCTTCCTGTGTTCTCATGG
ATGGTGTCCAAATGCCACCAGGAACTCATGCTCCTGCAGCGGCGGGGGGGATCCCCGAAGACCACTACAGATATGTACCT
GCTGATCCTGCAGCATTTTCTGCTGCATGCCATCCCCCCAGACTCAGCCTGCCACATTCTGGGACCCAGTCTCCTTCTGG
GCTGCCTCCCCACACTTCTGCGCCTCGGCAGACTTGCTCTCTGGGGCCTGGGCATGTGCTGCTATGTGTTCTCAGCCCAG
CAGCTCCAGGCAGCACAGGTCAGTCCTGATGACATTTCTCTTGGCTTCCTGGTATGTGCCAAAGGTGTCATGCCAGAGAG
TACAGTGCCTCTGGAATTCCTGCACATCACTTTCCAGTGCTTCTTTGCTGCGTTCTACCTGGCACTCAGTGCTGATGTGC
CGCCAGCCTTGCTCAGACACCTCTTCAATTGTGGCAGGCCAGGCAACTCACCAATGGCCAGGCTCCTGCCCATGTTGTGC
ATCCAGGGCTCGCGGGGGAAGGATGGCAGCGTGGCAGCTTTGCTGCAGAAGACTGAGCCGCACAACCTTCAGATCACGGC
AGCCTTCCTGGCGGGGCTGTTGTCCTGGGAGCACTGGGGCCTGCTGGCCGAGTGCCAGGCATCCAAGAAGGCCCTGCTCC
AGCGCCAGGCCTGTGCCCGCTGGTGTCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGCCGCGCCAGGT
GAGGCCAAGAGCATGCACGCCATGCCCAGGTTCATCTGGCTCCTCCGGAGCCTATATGAGATGCAGGATGAGCGGCTGGC
ACGGAAGGCTGTACGTGGCCTGAATGTCGGGCACCTCAAGTTGACATTTTGCAGCGTGGGCCCCACTGAGTGTGCTGCTC
TGGCCTTCGTGCTGCGGCACCTCCAGCGGCCCGTGGCCCTGCAGCTGGACTACAACTCTGTGGGTGACATTGGCGTGGAG
CAGCTGCTGCCTTGCCTTGGTGTCTGCAAGGCTCTGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 2 .21 RPM |
| SRP051959_skeletal_muscle | 11 .36 RPM |
| SRP051959_lymph_node | 2 .03 RPM |
| SRP051959_lung | 2 .28 RPM |
| SRP051959_liver | 2 .36 RPM |
| SRP051959_kidney | 0 .98 RPM |
| SRP051959_heart | 2 .32 RPM |
| SRP051959_colon | 1 .15 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3858 | 88.38 | 72.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000001786 retrocopies