Parental gene: | ME2, ENSCJAG00000001929 |
| Aliases: | None |
| Description: | Malic enzyme [Source:UniProtKB/TrEMBL;Acc:F7F0S1] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 13:88856024..88920167(+) |
>ENSCJAG00000001929
ATGTTGTCCCGGTTAAGAGCAGTTTCCACCACTTGCACTGTGGCCTGTCGACATTTGCACATAAAAGAAAAAGGCAAGCC
ACTTATGCTGAATCCAAGAACAAACAAGGGAATGGCATTTACTTTACAAGAACGACAAATGCTTGGTCTTCAAGGACTTC
TACCTCCCAAAATAGAGACACAAGATATTCAAGCCTTACGATTCCATAGAAACTTGAAAAAAATGACCAGCCCTTTGGAA
AAATATATCTACATAATGGGAATACAAGAAAGAAATGAGAAATTGTTTTATAGAATCCTGCAAGATGACATTGAGAGTTT
AATGCCAATTGTATATACACCAACAGTTGGTCTTGCCTGCTCCCAGTATGGACACATCTTTAGAAGACCTAAGGGATTAT
TTATTTCGATCTCAGACAGAGGTCATGTTAGATCAATTGTGGATAACTGGCCAGAAAATCATGTTAAGGCTGTTGTAGTG
ACTGATGGAGAGAGAATTCTGGGTCTTGGAGATCTGGGTGTCTATGGAATGGGAATTCCAGTAGGAAAACTTTGCTTGTA
TACAGCTTGTGCAGGAATACGGCCTGATAGATGCCTGCCAGTGTGTATTGATGTGGGAACGGATAATATCGCACTCTTAA
AAGACCCATTTTACATGGGCTTGTACCAGAAAAGAGATCGCACACAACAGTATGATGACCTGATTGATGAGTTTATGAAA
GCTATTACTGACAGATACGGCCGGAACACACTCATTCAGTTTGAAGACTTTGGAAATCATAATGCATTCAGGTTCTTGAG
AAAATACCGAGAAAAATATTGTACTTTCAATGATGATATTCAAGGGACAGCTGCAGTAGCTCTAGCAGGCCTTCTTGCAG
CACAAAAAGTTATTAGTAAACCAATCTCCGAACATAAAATCTTATTCCTTGGAGCGGGAGAGGCTGCTCTTGGAATTGCA
AATCTTATAGTTATGTCTATGGTAGAAAATGGCCTGTCAGAAGAAGAGGCACAAAAGAAAATCTGGATGTTTGACAAGTA
TGGTTTATTAGTTAAGGGACGGAAAGCAAAAATAGATACTTATCAGGAGCCATTTACTCACCCAGGCCCAGAGAGCATAC
CTGAGACTTTTGAAGATGCAGTTAATATACTGAAGCCTTCAACTATAATCGGAGTTGCAGGTGCTGGCCGTCTTTTCACT
CCTGATGTAATCAGAGCCATGGCCTCTATCAATGAAAGGCCTGTAATATTTGCATTAAGTAATCCTACAGCACAGGCAGA
GTGCACGGCTGAAGAAGCATATACACTTACAGAGGGCAGGTGTTTGTTTGCCAGTGGCAGTCCATTTGGGCCAGTGAAAC
TCACAGATGGGCGAGTCTTTACACCAGGTCAAGGAAACAATGTATATATTTTTCCAGGTGTGGCTTTAGCTGTTATTCTC
TGTAACACCCGGCATATTAGTGACAGTGTTTTCCTAGAAGCTGCAAAGGCACTAACAAGCCAGTTGACGGATGAAGAGCT
AGCCCAAGGGAGACTTTACCCACCACTTTCTAATATTCAGGAAGTTTCTATTAACATTGCTATTAAAGTTACAGAATACC
TGTATGCTAATAAAATGGCTTTCCGATATCCAGAACCTGAAGACAAGGCCAAATATGTTAAAGAAAGAATATGGCGGAGT
GAATATGATTCCCTGCTGCCAGATGTGTATGAGTGGCCAGAATCTGCGTCAAGCCCTCCTGTGATAACAGAATAG
ATGTTGTCCCGGTTAAGAGCAGTTTCCACCACTTGCACTGTGGCCTGTCGACATTTGCACATAAAAGAAAAAGGCAAGCC
ACTTATGCTGAATCCAAGAACAAACAAGGGAATGGCATTTACTTTACAAGAACGACAAATGCTTGGTCTTCAAGGACTTC
TACCTCCCAAAATAGAGACACAAGATATTCAAGCCTTACGATTCCATAGAAACTTGAAAAAAATGACCAGCCCTTTGGAA
AAATATATCTACATAATGGGAATACAAGAAAGAAATGAGAAATTGTTTTATAGAATCCTGCAAGATGACATTGAGAGTTT
AATGCCAATTGTATATACACCAACAGTTGGTCTTGCCTGCTCCCAGTATGGACACATCTTTAGAAGACCTAAGGGATTAT
TTATTTCGATCTCAGACAGAGGTCATGTTAGATCAATTGTGGATAACTGGCCAGAAAATCATGTTAAGGCTGTTGTAGTG
ACTGATGGAGAGAGAATTCTGGGTCTTGGAGATCTGGGTGTCTATGGAATGGGAATTCCAGTAGGAAAACTTTGCTTGTA
TACAGCTTGTGCAGGAATACGGCCTGATAGATGCCTGCCAGTGTGTATTGATGTGGGAACGGATAATATCGCACTCTTAA
AAGACCCATTTTACATGGGCTTGTACCAGAAAAGAGATCGCACACAACAGTATGATGACCTGATTGATGAGTTTATGAAA
GCTATTACTGACAGATACGGCCGGAACACACTCATTCAGTTTGAAGACTTTGGAAATCATAATGCATTCAGGTTCTTGAG
AAAATACCGAGAAAAATATTGTACTTTCAATGATGATATTCAAGGGACAGCTGCAGTAGCTCTAGCAGGCCTTCTTGCAG
CACAAAAAGTTATTAGTAAACCAATCTCCGAACATAAAATCTTATTCCTTGGAGCGGGAGAGGCTGCTCTTGGAATTGCA
AATCTTATAGTTATGTCTATGGTAGAAAATGGCCTGTCAGAAGAAGAGGCACAAAAGAAAATCTGGATGTTTGACAAGTA
TGGTTTATTAGTTAAGGGACGGAAAGCAAAAATAGATACTTATCAGGAGCCATTTACTCACCCAGGCCCAGAGAGCATAC
CTGAGACTTTTGAAGATGCAGTTAATATACTGAAGCCTTCAACTATAATCGGAGTTGCAGGTGCTGGCCGTCTTTTCACT
CCTGATGTAATCAGAGCCATGGCCTCTATCAATGAAAGGCCTGTAATATTTGCATTAAGTAATCCTACAGCACAGGCAGA
GTGCACGGCTGAAGAAGCATATACACTTACAGAGGGCAGGTGTTTGTTTGCCAGTGGCAGTCCATTTGGGCCAGTGAAAC
TCACAGATGGGCGAGTCTTTACACCAGGTCAAGGAAACAATGTATATATTTTTCCAGGTGTGGCTTTAGCTGTTATTCTC
TGTAACACCCGGCATATTAGTGACAGTGTTTTCCTAGAAGCTGCAAAGGCACTAACAAGCCAGTTGACGGATGAAGAGCT
AGCCCAAGGGAGACTTTACCCACCACTTTCTAATATTCAGGAAGTTTCTATTAACATTGCTATTAAAGTTACAGAATACC
TGTATGCTAATAAAATGGCTTTCCGATATCCAGAACCTGAAGACAAGGCCAAATATGTTAAAGAAAGAATATGGCGGAGT
GAATATGATTCCCTGCTGCCAGATGTGTATGAGTGGCCAGAATCTGCGTCAAGCCCTCCTGTGATAACAGAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 48 .13 RPM |
| SRP051959_skeletal_muscle | 20 .99 RPM |
| SRP051959_lymph_node | 49 .91 RPM |
| SRP051959_lung | 34 .00 RPM |
| SRP051959_liver | 13 .75 RPM |
| SRP051959_kidney | 22 .96 RPM |
| SRP051959_heart | 64 .36 RPM |
| SRP051959_colon | 57 .15 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000009064 | within_species_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000082212 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010823 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011833 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000009163 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_615 | 79.95 | 67.47 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000001929 retrocopies