Parental gene: | TFDP2, ENSCJAG00000001950 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 17:34516579..34698838(+) |
>ENSCJAG00000001950
ATGACGGCAAAAAATGTTGGTTTGACTTCTACAAATGCAGAAGTAAGAGGATTTATAGATCAGAATCTCAGTCCAACAAA
AGGCAACATTTCATTTGTTGCATTTCCAGTTTCCAATACCAACTCACCTACAAAGATTTTACCAAAAACCTTAGGACCAA
TCAATGTGAATGTTGGACCCCAAATGATTATAAGCACACCACAGAGACTTACCAGTTCAGGAAGTGTTCTGATTGGGAGT
CCATATACCCCTGCACCAGCAATGGTTACTCAGACACACATAGCAGAAGCTACTGGCTGGGTCCCTAGTGATAGAAAACG
GGCTAGAGAATTTATAGACTCTGATTTTTCAGAAAGTAAACGGAGCAAAAAAGGAGATAAAAATGGGAAAGGCTTGAGAC
ACTTTTCAATGAAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAACATCATACAATGAAGTCGCTGATGAGCTGGTGTCA
GAGTTCACCAATTCAAATAACCATTTGGCAGCTGATTCGGCTTACGATCAGAAGAACATTAGGCGAAGAGTTTATGATGC
TTTAAATGTACTAATGGCAATGAACATAATTTCAAAGGAAAAAAAAGAAATTAAGTGGATTGGCCTACCTACCAATTCTG
CTCAGGAATGTCAGAATCTGGAGATAGAAAAGCAGAGGCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCTGCAAGAA
CTTCTCCTACAGCAAATTGCTTTCAAAAACCTGGTACAGAGAAATCGACAAAATGAACAGCAAAATCAGGGCCCTCCTGC
TCTGAACTCTACCATTCAGCTGCCATTTATAATTATCAATACAAGCAGAAAAACAGTCATAGATTGCAGCATCTCCAGTG
ACAAGTTTGAGTATCTTTTCAATTTTGACAACACCTTTGAGATCCACGATGACATAGAAGTACTAAAGCGGATGGGAATG
TCATTTGGTTTGGAGTCAGGCAAATGCTCTCTGGAGGATCTGAAACTTGCGAAATCTCTGGTGCCAAAGGCTTTAGAAGG
TTATATCACAGATATCTCCACAGGACCTTCTTGGTTAAATCAGGGACTACTTCTGAACTCTACCCAATCAGGTTCAAATT
TAGACCTGACCACTGGTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGTTATGCTTGGATGCAGAAGTGGCCTTAGCA
ACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCAGCAGTGCAGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCC
CTGTTCATTCAATGATGAAGACGAGGAAGATGACGAGGAGGATTCCTCCTCCCCAGAATAA
ATGACGGCAAAAAATGTTGGTTTGACTTCTACAAATGCAGAAGTAAGAGGATTTATAGATCAGAATCTCAGTCCAACAAA
AGGCAACATTTCATTTGTTGCATTTCCAGTTTCCAATACCAACTCACCTACAAAGATTTTACCAAAAACCTTAGGACCAA
TCAATGTGAATGTTGGACCCCAAATGATTATAAGCACACCACAGAGACTTACCAGTTCAGGAAGTGTTCTGATTGGGAGT
CCATATACCCCTGCACCAGCAATGGTTACTCAGACACACATAGCAGAAGCTACTGGCTGGGTCCCTAGTGATAGAAAACG
GGCTAGAGAATTTATAGACTCTGATTTTTCAGAAAGTAAACGGAGCAAAAAAGGAGATAAAAATGGGAAAGGCTTGAGAC
ACTTTTCAATGAAAGTGTGTGAGAAAGTTCAACGAAAAGGTACAACATCATACAATGAAGTCGCTGATGAGCTGGTGTCA
GAGTTCACCAATTCAAATAACCATTTGGCAGCTGATTCGGCTTACGATCAGAAGAACATTAGGCGAAGAGTTTATGATGC
TTTAAATGTACTAATGGCAATGAACATAATTTCAAAGGAAAAAAAAGAAATTAAGTGGATTGGCCTACCTACCAATTCTG
CTCAGGAATGTCAGAATCTGGAGATAGAAAAGCAGAGGCGGATAGAACGGATAAAGCAGAAGCGGGCCCAGCTGCAAGAA
CTTCTCCTACAGCAAATTGCTTTCAAAAACCTGGTACAGAGAAATCGACAAAATGAACAGCAAAATCAGGGCCCTCCTGC
TCTGAACTCTACCATTCAGCTGCCATTTATAATTATCAATACAAGCAGAAAAACAGTCATAGATTGCAGCATCTCCAGTG
ACAAGTTTGAGTATCTTTTCAATTTTGACAACACCTTTGAGATCCACGATGACATAGAAGTACTAAAGCGGATGGGAATG
TCATTTGGTTTGGAGTCAGGCAAATGCTCTCTGGAGGATCTGAAACTTGCGAAATCTCTGGTGCCAAAGGCTTTAGAAGG
TTATATCACAGATATCTCCACAGGACCTTCTTGGTTAAATCAGGGACTACTTCTGAACTCTACCCAATCAGGTTCAAATT
TAGACCTGACCACTGGTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGTTATGCTTGGATGCAGAAGTGGCCTTAGCA
ACTGGGCAGTTCCTGGCCCCAAACAGTCACCAGTCCAGCAGTGCAGCCTCTCACTGCTCCGAGTCCCGAGGCGAGACCCC
CTGTTCATTCAATGATGAAGACGAGGAAGATGACGAGGAGGATTCCTCCTCCCCAGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 17 .02 RPM |
| SRP051959_skeletal_muscle | 8 .67 RPM |
| SRP051959_lymph_node | 11 .44 RPM |
| SRP051959_lung | 14 .46 RPM |
| SRP051959_liver | 9 .10 RPM |
| SRP051959_kidney | 15 .82 RPM |
| SRP051959_heart | 16 .49 RPM |
| SRP051959_colon | 11 .23 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006950 | within_species_paralog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000000168 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3164 | 98.33 | 93.95 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000001950 retrocopies