Parental gene:

ENSCJAG00000002418

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:3:45164386..45180756(-)


>ENSCJAG00000002418
ATGCCTTGCACTTGTACCTGGAGGAACTGGAGACAGTGGATTCGACCTTTAGCAGTGGTCCTCTACCTGGTGTCCATAGT
GGTTGCGGTTCCCCTATGCGTCTGGGAATTACAGAAACTGGAGGTTGGAATACACACCAAGGCTTGGTTTATTGCTGGGA
TCTTTTTGCTGTTGACTATACCTATATCGCTGTGGGTGATATTGCAACACTTAGTGCATTATACACAACCTGAACTACAA
AAACCAATAATGAGGATTCTTTGGATGGTACCCATTTACAGTTTAGATAGTTGGATAGCGTTGAAATATCCCAGCATTGC
AATATATGTGGATACCTGCAGAGAATGCTATGAAGCTTATGTAATTTACAACTTTATGGGATTCCTTACCAATTATCTAA
CTAACCGGTATCCAAATCTGGTATTAATCCTTGAAGCCAAAGATCAGCAGAAACATTTCCCTCCTTTATGTTGCTGTCCA
CCATGGGCTATGGGAGAAGTATTGCTGTTTAGGTGCAAACTAGGTGTATTGCAGTACACAGTTGTCAGACCTTTCACCAC
CATCGTTGCTTTAATCTGCGAGCTGCTTGGTATATATGACGAAGGGAACTTTAGCTTTTCAAATGCTTGGACTTACTTGG
TTATAATAAACAACATGTCACAGTTATTTGCCATGTATTGTCTCCTGCTATTTTATAAAGTACTAAAGGAAGAACTGAGC
CCAATCCAACCTGTTGGCAAATTTCTTTGTGTAAAGCTGGTGGTTTTTGTTTCTTTTTGGCAAGCAGTAGTTATTGCTTT
GTTGGTAAAAGTTGGCGTTATTTCTGAAAAGCATACGTGGGAATGGCAAACTGTAGAAGCTGTGGCCACAGGACTCCAGG
ACTTTATTATCTGTATTGAGATGTTCCTCGCTGCCATTGCTCATCATTACACATTCTCATATAAACCATATGTCCAAGAA
GCAGAAGAGGGCTCATGCTTTGATTCCTTTCTTGCCATGTGGGATGTCTCAGATATTAGAGATGATATTTCTGAACAAGT
AAGGCATGTTGGACGGACAGTCAGGGGACATCCCAGGAAAAAATTGTTTCCCGAGGATCAAGATCAAAATGAACATACAA
GCTTATTATCATCATCATCACAAGATGCAATTTCCATTGCTTCTTCTATGCCACCTTCACCCATGGGTCACTACCAAGGG
TTTGGACACACTGTGACTCCCCAGACTACGCCTACTACAGCTAAAATATCTGATGAAATACTTAGTGATACTATAGGAGA
GAAAAAATCTTCAGATAAATCCGTGGATTCCTGA

Library Parental gene expression (RPM)
SRP051959_spleen 15 .86 RPM
SRP051959_skeletal_muscle 13 .80 RPM
SRP051959_lymph_node 13 .38 RPM
SRP051959_lung 19 .20 RPM
SRP051959_liver 18 .95 RPM
SRP051959_kidney 24 .87 RPM
SRP051959_heart 13 .61 RPM
SRP051959_colon 18 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000015410 ortholog_one2many 2 retrogenes
retro_fcat_1929, retro_fcat_755,
Homo sapiens ENSG00000164168 ortholog_one2many 1 retrogene
retro_hsap_4870,
Macaca mulatta ENSMMUG00000004977 ortholog_one2many 1 retrogene
retro_mmul_2611,
Otolemur garnettii ENSOGAG00000015819 ortholog_one2many 1 retrogene
retro_ogar_3118,
Tarsius syrichta ENSTSYG00000005633 ortholog_one2many 1 retrogene
retro_tsyr_1001,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2276 86.20 93.82
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Download FASTA sequences of all ENSCJAG00000002418 retrocopies