Parental gene: | RBMX2, ENSCJAG00000002436 |
| Aliases: | None |
| Description: | RNA binding motif protein, X-linked 2 [Source:HGNC Symbol;Acc:24282] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | X:118307126..118319578(+) |
>ENSCJAG00000002436
AGCCCTTTAACTAAGGTGAAGCTGATCAACGAGCTGAATGAACGAGAGGTCCAGCTTGGGGTGGCCGATAAGGTGTCCTG
GCACTCCGAGTACAAGGACAGCGCCTGGATCTTCCTGGGAGGGCTTCCTTATGAACTGACTGAAGGAGACATCATCTGTG
TGTTCTCACAATATGGGGAGATTGTTAACATTAATCTCGTGCGGGACAAGAAGACTGGGAAGTCCAAAGGATTTTGTTTT
CTCTGCTATGAAGACCAGAGGAGCACAATTCTGGCCGTTGACAATTTTAATGGGATCAAGATCAAAGGAAGAACTATCCG
AGTGGATCATGTGTCTAACTATCGGGCTCCTAAGGACTCAGAAGAAATGGATGATGTGACCAGAGAGCTCCAGGAGAAGG
GCTGTGGGGCTCGCACCCCCTCACCAAGTTTGTCTAAGAGCTCTGAAGATGAAAAACCAACAAAAAAGCACAAAAAGGAC
AAAAAGGAAAAGAAGAAAAGAAAGAAAGAAAAAGAGAAAACTGACCGGGAGATACAGGCAGAGCAGCCGTCCTCTTCGTC
ACCCAGAAGTAAGACAGTAAAGAAAAAGGATGACCCTGGCCCTAAGAGGCACAGCAGCAAGAACTCAGAAAGAGCTCAGA
AGTCAGAACCCAGGGAGGGGCAGAAGCTCCCCAAGGCCAGGACTGCCTACTCTGGTGGAGCAGAGGAACTAGAGAGGGAA
CTGAAGAAGGAGAAACCCAAGCACGAGCACAAGTCCTCAAGCAAGAGGGAGGCAAGAGAAGAAAAGACCAGGGATAGGGA
CAGACGGCGGGCTCAGACACACATTCTAGCCAGCACAACCGGCGTTCCGAAGGGCATAGTCATAGAAGTAGAAGTAGGAG
CCGAGATAAATCCCATAGGTATAAAAGGTCCCGGCGCTCCCGGGAGCGGGAGTCTTCCAATCCCAGTGACCGTAGGCGTC
ACTGAAGACTACGGCTGCTCAGTAGATTTGGAAATAATTATGTTTTTTAAATGCAGTCAAATTCAGTTGGGCTGTTACTA
TTTTTGTATCTAA
AGCCCTTTAACTAAGGTGAAGCTGATCAACGAGCTGAATGAACGAGAGGTCCAGCTTGGGGTGGCCGATAAGGTGTCCTG
GCACTCCGAGTACAAGGACAGCGCCTGGATCTTCCTGGGAGGGCTTCCTTATGAACTGACTGAAGGAGACATCATCTGTG
TGTTCTCACAATATGGGGAGATTGTTAACATTAATCTCGTGCGGGACAAGAAGACTGGGAAGTCCAAAGGATTTTGTTTT
CTCTGCTATGAAGACCAGAGGAGCACAATTCTGGCCGTTGACAATTTTAATGGGATCAAGATCAAAGGAAGAACTATCCG
AGTGGATCATGTGTCTAACTATCGGGCTCCTAAGGACTCAGAAGAAATGGATGATGTGACCAGAGAGCTCCAGGAGAAGG
GCTGTGGGGCTCGCACCCCCTCACCAAGTTTGTCTAAGAGCTCTGAAGATGAAAAACCAACAAAAAAGCACAAAAAGGAC
AAAAAGGAAAAGAAGAAAAGAAAGAAAGAAAAAGAGAAAACTGACCGGGAGATACAGGCAGAGCAGCCGTCCTCTTCGTC
ACCCAGAAGTAAGACAGTAAAGAAAAAGGATGACCCTGGCCCTAAGAGGCACAGCAGCAAGAACTCAGAAAGAGCTCAGA
AGTCAGAACCCAGGGAGGGGCAGAAGCTCCCCAAGGCCAGGACTGCCTACTCTGGTGGAGCAGAGGAACTAGAGAGGGAA
CTGAAGAAGGAGAAACCCAAGCACGAGCACAAGTCCTCAAGCAAGAGGGAGGCAAGAGAAGAAAAGACCAGGGATAGGGA
CAGACGGCGGGCTCAGACACACATTCTAGCCAGCACAACCGGCGTTCCGAAGGGCATAGTCATAGAAGTAGAAGTAGGAG
CCGAGATAAATCCCATAGGTATAAAAGGTCCCGGCGCTCCCGGGAGCGGGAGTCTTCCAATCCCAGTGACCGTAGGCGTC
ACTGAAGACTACGGCTGCTCAGTAGATTTGGAAATAATTATGTTTTTTAAATGCAGTCAAATTCAGTTGGGCTGTTACTA
TTTTTGTATCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 4 .08 RPM |
| SRP051959_skeletal_muscle | 4 .98 RPM |
| SRP051959_lymph_node | 4 .09 RPM |
| SRP051959_lung | 4 .98 RPM |
| SRP051959_liver | 2 .75 RPM |
| SRP051959_kidney | 3 .95 RPM |
| SRP051959_heart | 3 .56 RPM |
| SRP051959_colon | 2 .31 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000008257 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000001763 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017095 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000016412 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3040 | 72.22 | 91.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_4128 | 78.77 | 92.29 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000002436 retrocopies