Parental gene: | DSCR3, ENSCJAG00000002626 |
| Aliases: | None |
| Description: | Down syndrome critical region gene 3 [Source:HGNC Symbol;Acc:3044] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 21:41213854..41259648(-) |
>ENSCJAG00000002626
ATGGGGACGGCCCTGGACATCAAGATTAAAAGAGCGAATAAAGTTTATCACGCCGGAGAAGTGCTCTCCGGCGTTGTGGT
CATATCGAGTAAGGATTCAGTCCAACACCAGGGAGTGTCTCTAACCATGGAAGGAACTGTAAACCTCCAGCTCAGTGCCA
AAAGTGTGGGGGTGTTTGAAGCTTTTTATAATTCTGTTAAGCCTATCCAGATTCTCAACAGCACCATAGAAATGGTGAAG
CCAGGGAAATTTCCCAGCGGCAAAACAGAAATCCCTTTTGAATTTCCTCTGCACGTGAAGGGTAACAAAGTTCTGTATGA
GACTTATCATGGCGTGTTTGTCAACATTCAGTATACACTGCGCTGTGACATGAGGCGGTCTCTGTTGGCCAAGGACTTGA
CAAAGACCTGTGAATTTATCGTTCACTCCGCTCCTCAGAAGGGAAAGTTGACTCCCAGTCCTGTGGACTTCACGATTACA
CCTGAAACCTTACAGAATGTCAAAGAGAGAGCTTTACTTCCCAAATTTCTCATTCGAGGCCATCTCAACTCAACAAACTG
CGTCATCACACAGCCGCTAACAGGAGAGCTGGTGGTGGAGAGCTCGGAGGCCGCCATCAGAAGCGTGGAGCTGCAGCTGG
TGCGCGTGGAGACATGCGGGTGTGCAGAAGGCTATGCCCGTGATGCCACGGAGATTCAGAACATTCAGATCGCCGATGGG
GACGTGTGCAGGGGCCTCTCTGTTCCCATCTACATGGTCTTCCCCAGGCTGTTCACCTGCCCTACGCTGGAGACCACCAA
CTTCAAAGTGGAATTTGAGGTTAACATCGTGGTGCTTCTTCACCCTGACCACCTCATCACGGAGAACTTCCCGCTGAAGC
TCTGCAGGACATAG
ATGGGGACGGCCCTGGACATCAAGATTAAAAGAGCGAATAAAGTTTATCACGCCGGAGAAGTGCTCTCCGGCGTTGTGGT
CATATCGAGTAAGGATTCAGTCCAACACCAGGGAGTGTCTCTAACCATGGAAGGAACTGTAAACCTCCAGCTCAGTGCCA
AAAGTGTGGGGGTGTTTGAAGCTTTTTATAATTCTGTTAAGCCTATCCAGATTCTCAACAGCACCATAGAAATGGTGAAG
CCAGGGAAATTTCCCAGCGGCAAAACAGAAATCCCTTTTGAATTTCCTCTGCACGTGAAGGGTAACAAAGTTCTGTATGA
GACTTATCATGGCGTGTTTGTCAACATTCAGTATACACTGCGCTGTGACATGAGGCGGTCTCTGTTGGCCAAGGACTTGA
CAAAGACCTGTGAATTTATCGTTCACTCCGCTCCTCAGAAGGGAAAGTTGACTCCCAGTCCTGTGGACTTCACGATTACA
CCTGAAACCTTACAGAATGTCAAAGAGAGAGCTTTACTTCCCAAATTTCTCATTCGAGGCCATCTCAACTCAACAAACTG
CGTCATCACACAGCCGCTAACAGGAGAGCTGGTGGTGGAGAGCTCGGAGGCCGCCATCAGAAGCGTGGAGCTGCAGCTGG
TGCGCGTGGAGACATGCGGGTGTGCAGAAGGCTATGCCCGTGATGCCACGGAGATTCAGAACATTCAGATCGCCGATGGG
GACGTGTGCAGGGGCCTCTCTGTTCCCATCTACATGGTCTTCCCCAGGCTGTTCACCTGCCCTACGCTGGAGACCACCAA
CTTCAAAGTGGAATTTGAGGTTAACATCGTGGTGCTTCTTCACCCTGACCACCTCATCACGGAGAACTTCCCGCTGAAGC
TCTGCAGGACATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 10 .38 RPM |
| SRP051959_skeletal_muscle | 14 .63 RPM |
| SRP051959_lymph_node | 11 .00 RPM |
| SRP051959_lung | 10 .20 RPM |
| SRP051959_liver | 5 .65 RPM |
| SRP051959_kidney | 10 .56 RPM |
| SRP051959_heart | 10 .23 RPM |
| SRP051959_colon | 6 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000007920 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004717 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013900 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000001681 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2878 | 75.66 | 62.96 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000002626 retrocopies