Parental gene: | ENSCJAG00000002838 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 21:38537486..38639205(-) |
>ENSCJAG00000002838
ATGCAAGGAGAGCAAGGTCATGGGTTCTTCTCACTCCCCCTTAAGGAACTGCCTGGCAGAGACCGGCTACCGGCTACTAC
CCGTTCCTATCCTAAACCTCATGTGGAGCAGGAACCATCCGCCCATGCACCCACTCCCCACCCGCGCACGCTTCCTAGCA
GTAACATTCCTGAAGACATTCTCTTCTCTTATCCCAAATCCTCGCTCCCATTGCAGCTACACTGCGCCTTCCATAGCTTT
TCCAAGGCCAAATTTGAGTCTCTCTTTAGGACATATGACAAGGACATCACCTTTCAGTATTTTAAGAGCTTCAAACGAGT
CAGAATAAACTTCAGCAACCCCTTCTCCGCAGCAGATGCCAGGCTCCAGCTGCATAAGACTGAGTTTCTGGGAAAGGAAA
TGAAGTTATATTTTGCTCAGACCTTACACATAGGAAGCTCACACCTGGCTCCGCCAAACCCCGACAAGCAGTTTCTGATC
TCCCCTCCCGCCTCTCCGCCAGTGGGGTGGAAACAAGTGGAAGATGCCACCCCAGTCATAAACTATGATCTCTTATACGC
CATCTCCAAGCTGGGGCCAGGGGAAAAGTATGAATTGCACGCAGCGACTGACACCACTCCCAGTGTGGTGGTCCACGTAT
GTGAGAGCGATGAAGAGAAGGAGGAAGAAGAGGAGATGGAGAGAATGAAGAGACCCAAGCCAAAAATTATCCAGACCAGG
AGGCCAGAGTACACGCCGATCCACCTCAGCTGA
ATGCAAGGAGAGCAAGGTCATGGGTTCTTCTCACTCCCCCTTAAGGAACTGCCTGGCAGAGACCGGCTACCGGCTACTAC
CCGTTCCTATCCTAAACCTCATGTGGAGCAGGAACCATCCGCCCATGCACCCACTCCCCACCCGCGCACGCTTCCTAGCA
GTAACATTCCTGAAGACATTCTCTTCTCTTATCCCAAATCCTCGCTCCCATTGCAGCTACACTGCGCCTTCCATAGCTTT
TCCAAGGCCAAATTTGAGTCTCTCTTTAGGACATATGACAAGGACATCACCTTTCAGTATTTTAAGAGCTTCAAACGAGT
CAGAATAAACTTCAGCAACCCCTTCTCCGCAGCAGATGCCAGGCTCCAGCTGCATAAGACTGAGTTTCTGGGAAAGGAAA
TGAAGTTATATTTTGCTCAGACCTTACACATAGGAAGCTCACACCTGGCTCCGCCAAACCCCGACAAGCAGTTTCTGATC
TCCCCTCCCGCCTCTCCGCCAGTGGGGTGGAAACAAGTGGAAGATGCCACCCCAGTCATAAACTATGATCTCTTATACGC
CATCTCCAAGCTGGGGCCAGGGGAAAAGTATGAATTGCACGCAGCGACTGACACCACTCCCAGTGTGGTGGTCCACGTAT
GTGAGAGCGATGAAGAGAAGGAGGAAGAAGAGGAGATGGAGAGAATGAAGAGACCCAAGCCAAAAATTATCCAGACCAGG
AGGCCAGAGTACACGCCGATCCACCTCAGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 14 .12 RPM |
| SRP051959_skeletal_muscle | 78 .01 RPM |
| SRP051959_lymph_node | 10 .96 RPM |
| SRP051959_lung | 14 .32 RPM |
| SRP051959_liver | 29 .11 RPM |
| SRP051959_kidney | 110 .18 RPM |
| SRP051959_heart | 31 .59 RPM |
| SRP051959_colon | 12 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012084 | within_species_paralog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000010683 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000006972 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_437 | 88.75 | 64.26 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_4016 | 90.36 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000002838 retrocopies