Parental gene: | SHISA5, ENSCJAG00000002915 |
| Aliases: | None |
| Description: | shisa homolog 5 (Xenopus laevis) [Source:HGNC Symbol;Acc:30376] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 15:24143916..24187262(-) |
>ENSCJAG00000002915
ATGGCCGCGCGGGCCCCAGCACCGCGGATCCTGTTGCTGTTGCTGCCGCTGCTACTGCAGCCTCCGGGTGGTGAGCCTGG
GGCGTATGGTGAGGTGTGTACAGCTTCCCGTGGACTCAGTCTCTTCCCTGAGTCCTGTCCAGATTTCTGCTGTGGTACCT
GTCATGACCGATACTGCTGCTCTGATGTGCTGAAGAAATTTGTGTGGACCGAGGAAAGGTGTGCTGTGCCTGAGGCCAGT
GTGCCTGCTGATGTAGAACCGGTTGAGCAGCTGGGCTCGGCGCTGAAGTTTCGCTCTGGCTACAACGACCCCATGTCAGG
GTTCGGAGCAACTTTGGCCGTTGGCCTGACCATCTTTGTGCTGTCTGTTGTCACTATCATCATCTGCTTCACCTGCTCCT
GCTGCTGCCTTTACAAGACGTGCTGCCAACCTCGTCCGGTTGTCACCACCACCACGTCCACCACTGTGGTGCACGCCCCT
TACCCTCAGCCTCCAAGTGTGCCGCCCAGCTACCCTGGACCAAGCTACCAGGGCTACCACGCCATGCCCCCTCAGCCAGG
GATGCCAGCAGCACCCTACCCAATGCAGTACCCACCGCCTTACCCAGCCCAGCCAATGGGCCCGCCGGCCTGCCACGAGA
CCCTGGCTGGAGGAGTAGCGGCACCCTACTCTGCCAGCCAGCCTCCTTACAACCCGGCCTACATGGATGCCCCGAAGGCG
GCCCTCTGA
ATGGCCGCGCGGGCCCCAGCACCGCGGATCCTGTTGCTGTTGCTGCCGCTGCTACTGCAGCCTCCGGGTGGTGAGCCTGG
GGCGTATGGTGAGGTGTGTACAGCTTCCCGTGGACTCAGTCTCTTCCCTGAGTCCTGTCCAGATTTCTGCTGTGGTACCT
GTCATGACCGATACTGCTGCTCTGATGTGCTGAAGAAATTTGTGTGGACCGAGGAAAGGTGTGCTGTGCCTGAGGCCAGT
GTGCCTGCTGATGTAGAACCGGTTGAGCAGCTGGGCTCGGCGCTGAAGTTTCGCTCTGGCTACAACGACCCCATGTCAGG
GTTCGGAGCAACTTTGGCCGTTGGCCTGACCATCTTTGTGCTGTCTGTTGTCACTATCATCATCTGCTTCACCTGCTCCT
GCTGCTGCCTTTACAAGACGTGCTGCCAACCTCGTCCGGTTGTCACCACCACCACGTCCACCACTGTGGTGCACGCCCCT
TACCCTCAGCCTCCAAGTGTGCCGCCCAGCTACCCTGGACCAAGCTACCAGGGCTACCACGCCATGCCCCCTCAGCCAGG
GATGCCAGCAGCACCCTACCCAATGCAGTACCCACCGCCTTACCCAGCCCAGCCAATGGGCCCGCCGGCCTGCCACGAGA
CCCTGGCTGGAGGAGTAGCGGCACCCTACTCTGCCAGCCAGCCTCCTTACAACCCGGCCTACATGGATGCCCCGAAGGCG
GCCCTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 13 .82 RPM |
| SRP051959_skeletal_muscle | 2 .73 RPM |
| SRP051959_lymph_node | 30 .07 RPM |
| SRP051959_lung | 24 .81 RPM |
| SRP051959_liver | 8 .97 RPM |
| SRP051959_kidney | 14 .73 RPM |
| SRP051959_heart | 5 .44 RPM |
| SRP051959_colon | 7 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000164054 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000028207 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000010062 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006485 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013902 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000014888 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_4077 | 72.99 | 99.27 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_4152 | 72.26 | 55.79 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000002915 retrocopies