Parental gene: | PRRC2A, ENSCJAG00000003047 |
| Aliases: | None |
| Description: | proline-rich coiled-coil 2A [Source:HGNC Symbol;Acc:13918] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 4:32175204..32192214(+) |
>ENSCJAG00000003047
ATGGTGAGTGGGGTAGGTGGGACTCCCCGGGATCCCACCGGGGTTAGTCCCTTTCCCCCTAAACGTCGGGAGCGGCCTCC
CAGAAGACCAGAGCTGCTACAGGAGGAATCTTTGCCACCTCCTCATAGCTCTGGATTCTTGGGCTCCAAGCCTGAGGGCC
CAGGCCCTCAGGCAGAATCCAGAGATACAGGCACGGAGGCCCTGACCCCTCACATCTGGAACCGTTTACATACTGCCACT
AGCCGAAAGAGTTATAGGCCCAGCTCCATGGAGCCTTGGATGGAGCCCCTGAGTCCTTTTGAGGATGTGGCTGGCACAGA
GATGAGTCAGTCTGACAGTGGGGTGGACCTGAGTGGGGATTCTCAGGTGTCATCAGGTCCCTGCAGCCAGCGAAGTTCCC
CTGATGGAGGACTCAAGGGGGCAGCAGAGGGACCTCCCAAGAGGCCTGGAGGCCCCTCACCCCTGAATGCCGTTACTTGT
GAGGGTCCACCTGGCTCTGAACCTCCTAGGAGACCGCCACCTGCCCCCCACGATGGGGACAGAAAGGAGCTGCCCCGGGA
GCAGCCACTGCCCCCTGGCCCCATTGGCACAGAACGGTCACAGCGTACAGACCGAGTACCAGAGCCTGGCCCCATTCGGC
CATCCCATCGACCTGGCCCCCCCATCCAGTTTGGCACTAGTGACAAGGACTCTGACTTACGCCTCGTGGTAGGAGACACC
TTAAAAGCAGAGAAGGAGCTATCAGTATCAGTCACTGAGGCCATTCCTATATCCCGAGACTGGGAGCTGCTTCCCAGTGC
TGCTGCCTCTGCTGAGCCACAATCCAAGAACCTGGGTTCTGGGCACTGTGGCACAGAGCCCAGCTCCTCAGGCCAGCGCC
TGTATCCTGAGGTCTTCTATGGCAGCCCTGGACCTTCCAGTTCTCAGGTCTCTGGGGGAGCCATGGACTCTCAATTACAT
CCAAACAGTGGAGGCTTCCGCCCTGGGACACCCTCACTGCATCCTTACAGATCACAGCCCCTATACCTACCCCCCGGCCC
AGCCCCTCCCTCAGCACTACTCTCTGGGGTAGCTCTCAAGGGCCAGTTTCTAGATTTCTCCACACTACAAGCTGCAGAGC
TAGGGAAGTTGCCGGCTGGAGGAGTTCTCTACCCTCCACCTTCCTTCCTCTACTCTACAGCTTTCTGCCCCAGTCCTTTG
CCCGACACATCGTTGCTTCAGGTACGCCAGGATCTGCCATCCCCTTCGGATTTTTATTCTCCTCTGCAGCCTGGTGGCCA
AAGTGGCTTTCTCCCTTCAGGGGCTCCTGCCCAACAGATGCTTCTACCCATGGTAGACTCACAGCTGCCTGTGGTGAATT
TCGGCTCCCTGCCGCCAGCACCACCTCCTGCCCCACCTCCCCTTTCTCTGTTACCTGTGGGCCCTGCTCTGCAGCCCCCC
AGCCTGGCTGTGCGGCCCCCACCTGCTCCTGCTCCTCGGGTGCTGCCTTCACCTGCCAGGCCCTTCCCTGCTAGCTTGGG
GCGAGCAGAGCTGCATCCAGTGGAACTAAAGCCGTTCCAGGATTATCAAAAACTGAGCAGCAACCTTGGGGGACCTGGGT
CATCACGTACTCCCCCAACTGGAAGGTCCTTCTCTGGCCTCAATTCCCGTCTCAAGGCCACACCTTCCACCTACAGTGGA
GTCTTCCGCACCCAGCGCATCGACCTTTACCAGCAGGCCTCTTCACCAGATGCCCTGCGCTGGATACCTAAGCCCTGGGA
GCGGACAGGGCCACCTTCTCGAGAAGGGGCTTCCCGACGGGCGGAGGAGCCCGGGTCCCGAGGGGACAAGGAGCCTGGGT
TGCCCCCACCCCGCTGA
ATGGTGAGTGGGGTAGGTGGGACTCCCCGGGATCCCACCGGGGTTAGTCCCTTTCCCCCTAAACGTCGGGAGCGGCCTCC
CAGAAGACCAGAGCTGCTACAGGAGGAATCTTTGCCACCTCCTCATAGCTCTGGATTCTTGGGCTCCAAGCCTGAGGGCC
CAGGCCCTCAGGCAGAATCCAGAGATACAGGCACGGAGGCCCTGACCCCTCACATCTGGAACCGTTTACATACTGCCACT
AGCCGAAAGAGTTATAGGCCCAGCTCCATGGAGCCTTGGATGGAGCCCCTGAGTCCTTTTGAGGATGTGGCTGGCACAGA
GATGAGTCAGTCTGACAGTGGGGTGGACCTGAGTGGGGATTCTCAGGTGTCATCAGGTCCCTGCAGCCAGCGAAGTTCCC
CTGATGGAGGACTCAAGGGGGCAGCAGAGGGACCTCCCAAGAGGCCTGGAGGCCCCTCACCCCTGAATGCCGTTACTTGT
GAGGGTCCACCTGGCTCTGAACCTCCTAGGAGACCGCCACCTGCCCCCCACGATGGGGACAGAAAGGAGCTGCCCCGGGA
GCAGCCACTGCCCCCTGGCCCCATTGGCACAGAACGGTCACAGCGTACAGACCGAGTACCAGAGCCTGGCCCCATTCGGC
CATCCCATCGACCTGGCCCCCCCATCCAGTTTGGCACTAGTGACAAGGACTCTGACTTACGCCTCGTGGTAGGAGACACC
TTAAAAGCAGAGAAGGAGCTATCAGTATCAGTCACTGAGGCCATTCCTATATCCCGAGACTGGGAGCTGCTTCCCAGTGC
TGCTGCCTCTGCTGAGCCACAATCCAAGAACCTGGGTTCTGGGCACTGTGGCACAGAGCCCAGCTCCTCAGGCCAGCGCC
TGTATCCTGAGGTCTTCTATGGCAGCCCTGGACCTTCCAGTTCTCAGGTCTCTGGGGGAGCCATGGACTCTCAATTACAT
CCAAACAGTGGAGGCTTCCGCCCTGGGACACCCTCACTGCATCCTTACAGATCACAGCCCCTATACCTACCCCCCGGCCC
AGCCCCTCCCTCAGCACTACTCTCTGGGGTAGCTCTCAAGGGCCAGTTTCTAGATTTCTCCACACTACAAGCTGCAGAGC
TAGGGAAGTTGCCGGCTGGAGGAGTTCTCTACCCTCCACCTTCCTTCCTCTACTCTACAGCTTTCTGCCCCAGTCCTTTG
CCCGACACATCGTTGCTTCAGGTACGCCAGGATCTGCCATCCCCTTCGGATTTTTATTCTCCTCTGCAGCCTGGTGGCCA
AAGTGGCTTTCTCCCTTCAGGGGCTCCTGCCCAACAGATGCTTCTACCCATGGTAGACTCACAGCTGCCTGTGGTGAATT
TCGGCTCCCTGCCGCCAGCACCACCTCCTGCCCCACCTCCCCTTTCTCTGTTACCTGTGGGCCCTGCTCTGCAGCCCCCC
AGCCTGGCTGTGCGGCCCCCACCTGCTCCTGCTCCTCGGGTGCTGCCTTCACCTGCCAGGCCCTTCCCTGCTAGCTTGGG
GCGAGCAGAGCTGCATCCAGTGGAACTAAAGCCGTTCCAGGATTATCAAAAACTGAGCAGCAACCTTGGGGGACCTGGGT
CATCACGTACTCCCCCAACTGGAAGGTCCTTCTCTGGCCTCAATTCCCGTCTCAAGGCCACACCTTCCACCTACAGTGGA
GTCTTCCGCACCCAGCGCATCGACCTTTACCAGCAGGCCTCTTCACCAGATGCCCTGCGCTGGATACCTAAGCCCTGGGA
GCGGACAGGGCCACCTTCTCGAGAAGGGGCTTCCCGACGGGCGGAGGAGCCCGGGTCCCGAGGGGACAAGGAGCCTGGGT
TGCCCCCACCCCGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 18 .30 RPM |
| SRP051959_skeletal_muscle | 17 .19 RPM |
| SRP051959_lymph_node | 22 .28 RPM |
| SRP051959_lung | 19 .85 RPM |
| SRP051959_liver | 6 .28 RPM |
| SRP051959_kidney | 18 .73 RPM |
| SRP051959_heart | 29 .57 RPM |
| SRP051959_colon | 15 .29 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_571 | 78.16 | 60.68 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_572 | 91.98 | 95.26 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000003047 retrocopies