Parental gene: | PRKAR2A, ENSCJAG00000003255 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 15:24429317..24527648(-) |
>ENSCJAG00000003255
ATGAGCCACATCCAGATCCCGCCGGGGCTCACGGAGCTGCTGCAGGGCTACACAGTGGAGGTGCTGCGACAGCAGCCGCC
TGACCTCGTCAAATTCGCGGTGGACTACTTCACCCGCCTGCGCGAGGCCCGTGCCCCTGCCTCAGTCCTGCCCGACGCCA
CCCCACGCCAGAGTCTGGGCCACACCACGCCAGAACCCGGCCCAGACCACGTCGCCGACGCCAACGGGGACAGCGAGTCG
GAGGAGGACGAGGACTTGGAAGTTCCAGTTCCTAGCAGATTTAATAGACGAGTATCAGTCTGTGCTGAGACCTATAACCC
TGATGAGGAAGAGGAAGATACAGATCCAAGGGTGATTCATCCTAAAACTGATGAACAGAGATGCAGACTTCAGGAAGCTT
GCAAAGATATTCTCCTTTTCAAAAATCTTGATCAGGAACAGCTTTCTCAAGTTCTTGATGCCATGTTTGAAAGGATAGTC
AAAGCTGATGAGCATGTCATCGACCAAGGAGATGATGGAGACAACTTTTATGTCATAGAACGGGGAACTTATGACATTTT
AGTAACAAAAAATAATCAAACCCGCTCTGTTGGTCAATATGACAACCGTGGCAGTTTTGGAGAACTAGCTCTGATGTACA
ACACCCCGAGAGCTGCTACCATTGTTGCTACCTCAGAAGGCTCCCTTTGGGGACTGGACCGGGTGACTTTTAGAAGAATC
ATAGTGAAAAATAATGCAAAGAAGAGGAAGATGTTTGAATCATTTATTGAGTCTGTGCCCCTCCTTAAATCACTGGAGTT
GTCAGAACGAATGAAGATTGTGGATGTAATAGGAGAGAAGATCTATAAGGATGGAGAACGCATAATCACTCAGGGTGAAA
AGGCTGATAGCTTTTACATCATAGAGTCTGGTGAAGTGAGCATTTTGATTAGAAGCAAGACTAAATCAAACAAGGATGGT
GGAAACCAGGAGGTCGAGATTACCCGTTGCCATAAGGGACAGTACTTTGGAGAACTTGCCCTGGTTACCAACAAACCCAG
AGCTGCTTCAGCTTATGCAGTTGGAGATGTCAAATGCTTAGTTATGGATGTACAAGCATTTGAGAGGCTTCTGGGGCCCT
GCATGGACATCATGAAGAGGAACATCTCACACTATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCATGGATTTGGGC
AACCTCGGGCAGTAG
ATGAGCCACATCCAGATCCCGCCGGGGCTCACGGAGCTGCTGCAGGGCTACACAGTGGAGGTGCTGCGACAGCAGCCGCC
TGACCTCGTCAAATTCGCGGTGGACTACTTCACCCGCCTGCGCGAGGCCCGTGCCCCTGCCTCAGTCCTGCCCGACGCCA
CCCCACGCCAGAGTCTGGGCCACACCACGCCAGAACCCGGCCCAGACCACGTCGCCGACGCCAACGGGGACAGCGAGTCG
GAGGAGGACGAGGACTTGGAAGTTCCAGTTCCTAGCAGATTTAATAGACGAGTATCAGTCTGTGCTGAGACCTATAACCC
TGATGAGGAAGAGGAAGATACAGATCCAAGGGTGATTCATCCTAAAACTGATGAACAGAGATGCAGACTTCAGGAAGCTT
GCAAAGATATTCTCCTTTTCAAAAATCTTGATCAGGAACAGCTTTCTCAAGTTCTTGATGCCATGTTTGAAAGGATAGTC
AAAGCTGATGAGCATGTCATCGACCAAGGAGATGATGGAGACAACTTTTATGTCATAGAACGGGGAACTTATGACATTTT
AGTAACAAAAAATAATCAAACCCGCTCTGTTGGTCAATATGACAACCGTGGCAGTTTTGGAGAACTAGCTCTGATGTACA
ACACCCCGAGAGCTGCTACCATTGTTGCTACCTCAGAAGGCTCCCTTTGGGGACTGGACCGGGTGACTTTTAGAAGAATC
ATAGTGAAAAATAATGCAAAGAAGAGGAAGATGTTTGAATCATTTATTGAGTCTGTGCCCCTCCTTAAATCACTGGAGTT
GTCAGAACGAATGAAGATTGTGGATGTAATAGGAGAGAAGATCTATAAGGATGGAGAACGCATAATCACTCAGGGTGAAA
AGGCTGATAGCTTTTACATCATAGAGTCTGGTGAAGTGAGCATTTTGATTAGAAGCAAGACTAAATCAAACAAGGATGGT
GGAAACCAGGAGGTCGAGATTACCCGTTGCCATAAGGGACAGTACTTTGGAGAACTTGCCCTGGTTACCAACAAACCCAG
AGCTGCTTCAGCTTATGCAGTTGGAGATGTCAAATGCTTAGTTATGGATGTACAAGCATTTGAGAGGCTTCTGGGGCCCT
GCATGGACATCATGAAGAGGAACATCTCACACTATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCATGGATTTGGGC
AACCTCGGGCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 27 .54 RPM |
| SRP051959_skeletal_muscle | 32 .60 RPM |
| SRP051959_lymph_node | 18 .68 RPM |
| SRP051959_lung | 21 .54 RPM |
| SRP051959_liver | 18 .19 RPM |
| SRP051959_kidney | 21 .85 RPM |
| SRP051959_heart | 32 .52 RPM |
| SRP051959_colon | 28 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000013392 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012426 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006822 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1807 | 87.70 | 59.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000003255 retrocopies