Parental gene:

PRKD3, ENSCJAG00000003965

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:14:70966058..71029041(+)


>ENSCJAG00000003965
ATGTCTGCAAATAATTCCCCTCCATCAGCCCAGAAGTCTGTATTATCTCCAGCTATTCCTGCTGTGCTTCCAACTGCTTC
TCCGTGTTCAAGTCCTAAGACGGGACTCTCTGCCCGACTGTCTAATGGAAGCTTCAGTGCACCATCGCTCACTAACTCCA
GAGGCTCAGTGCATACAGTTTCATTTCTACTACAAATTGGCCTCACACGGGAGAGTGTTACCATTGAAGCCCAGGAACTG
TCTTTATCTGCTGTCAAGGATCTTGTGTGCTCCATTGTTTATCAAAAGTTTCCAGAGTGTGGATTCTTTGGCATGTATGA
CAAAATTCTTCTCTTTCGCCATGACATGAACTCAGAAAATATTTTGCAGCTGATTACCTCAGCAGATGAAATACATGAAG
GAGATCTAGTGGAAGTTGTTCTTTCAGCTTTGGCCACAGTAGAAGACTTCCAGATTCGTCCACATACTCTCTATGTACAT
TCTTACAAAGCTCCTACTTTCTGTGATTATTGTGGTGAGATGCTCTGGGGATTGGTACGGCAGGGACTTAAATGTGAAGG
TTGTGGATTAAATTATCATAAACGATGTGCCTTCAAGATTCCAAATAACTGTAGTGGAGTAAGAAAGAGACGTCTGTCAA
ATGTATCTTTGCCAGGACCCGGCCTCTCAGTTCCAAGACCCCTACAGCCTGAATATGTAGCCCTTCCCAGTGAAGAGTCA
CATGTCCACCAGGAACCAAGTAAGAGAATTCCTTCTTGGAGTGGTCGCCCAATCTGGATGGAAAAGATGGTAATGTGCAG
AGTGAAGGTTCCACACACATTTGCTGTTCACTCTTATACCCGTCCCACGATATGTCAGTACTGCAAGCGGTTACTGAAAG
GCCTCTTTCGCCAAGGAATGCAGTGTAAAGATTGTAAATTCAACTGTCATAAACGCTGTGCATCAAAAGTACCAAGAGAC
TGCCTTGGAGAGGTTACTTTCAATGGAGAACCTTCCAGTCTGGGAACAGATACAGATATACCAATGGATATTGACAATAA
TGACATAAATAGTGATAGTAGTCGGGGCTTGGATGACACAGAAGAGCCATCTCCCCCAGAAGACAAGATGTTCTTCCTGG
ATCCATCTGATCTTGATGTGGAAAGAGATGAAGAAGCCGTTAAAACAATCAGTCCATCAACAAGCAATAATATTCCGCTA
ATGAGGGTTGTACAATCCATCAAGCACACAAAGAGGAAGAGCAGCACAATGGTGAAGGAAGGGTGGATGGTCCATTACAC
CAGCAGGGATAACCTGAGAAAGAGGCATTATTGGAGGCTTGACAGCAAATGTCTAACATTATTTCAGAATGAATCTGGAT
CAAAGTATTATAAGGAAATTCCACTTTCAGAAATTCTTCGCATATCTTCACCACGAGATTTCACAAACATTTCACAAGGC
AGCAATCCACACTGTTTTGAAATCATCACTGATACTATGGTATACTTCGTTGGTGAGAACAATGGGGATAGCTCTCATAA
TCCTGTTCTTGCTGCCACTGGAGTTGGACTTGATGTAGCACAGAGCTGGGAAAAAGCAATTCGCCAAGCCCTCATGCCTG
TTACTCCTCAAGCAAGTGTTTGCACTTCTCCAGGGCAAGGGAAAGATCACAAAGATTTGTCTATGAGTATCTCTGTATCT
AACTGCCAGATCCAGGAGAATGTGGATATCAGTACTGTTTACCAGATCTTTGCAGATGAGGTGCTTGGTTCAGGCCAGTT
TGGCATTGTTTATGGAGGAAAACATAGAAAGACTGGGAGGGATGTGGCTATTAAAGTAATTGATAAGATGAGATTCCCCA
CAAAACAAGAAAGTCAACTCCGAAATGAAGTGGCTATTTTACAGAATTTGCACCATCCTGGAATTGTAAACCTGGAATGT
ATGTTTGAAACCCCAGAACGAGTCTTTGTAGTAATGGAAAAGCTGCATGGAGATATGTTGGAAATGATTCTATCCAGTGA
GAAAAGTCGGCTTCCAGAACGAATTACTAAATTCATGGTCACACAGATACTTGTTGCTTTGAGGAATCTGCATTTTAAGA
ATATTGTGCACTGTGATTTAAAGCCAGAAAATGTGCTGCTTGCATCAGCAGAGCCATTTCCTCAGGTGAAGCTATGTGAT
TTTGGATTTGCACGCATCATTGGTGAAAAGTCATTCAGGAGATCTGTGGTAGGAACTCCAGCATACTTAGCCCCTGAAGT
TCTCCGGAGCAAAGGTTACAACCGTTCTCTAGATATGTGGTCAGTGGGAGTCATCATCTATGTGAGCCTCAGTGGCACAT
TTCCTTTTAATGAGGATGAAGATATAAATGACCAGATCCAAAATGCTGCATTTATGTACCCACCAAATCCATGGAAAGAA
ATTTCTGGTGAAGCAATTGATTTGATAAACAATCTGCTTCAAGTGAAGATGAGAAAACGTTATAGTGTTGACAAATCTCT
TAGTCATCCCTGGCTACAGGACTATCAGACTTGGCTTGACCTTAGAGAATTTGAAACTCGCATTGGAGAACGTTACATTA
CACATGAAAGTGATGATGCTCGCTGGGAAATACATGCATACACACATAACCTTGTATACCCAAAGCACTTCATTATGGCT
CCTAATCCAGATGATATGGAAGAAGATCCTTAA

Library Parental gene expression (RPM)
SRP051959_spleen 40 .88 RPM
SRP051959_skeletal_muscle 13 .12 RPM
SRP051959_lymph_node 53 .95 RPM
SRP051959_lung 47 .89 RPM
SRP051959_liver 18 .50 RPM
SRP051959_kidney 24 .96 RPM
SRP051959_heart 31 .48 RPM
SRP051959_colon 33 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000011801 within_species_paralog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_995 89.32 65.96
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Download FASTA sequences of all ENSCJAG00000003965 retrocopies