Parental gene: | ERI3, ENSCJAG00000003995 |
| Aliases: | None |
| Description: | ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:17276] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:78949320..79087580(-) |
>ENSCJAG00000003995
ATGGCGACAGCCTCTCCCGCTGCTGACGGGGGGCGGGGGCGGCCCTGGGAAGGAGGGCTGGTCTCCTGGCCCCCTGCCCC
TCCCCTTACTCTCCCCTGGACTTGGATGGGCCCGAGTTGGGGGCAACACCCCGGGCATTGGGGCTTTCCAGCTTTCACAG
AACCTTCAGCATCCCCAGCTGCCGGTCTTGGGATCTTCGAAGTAAGGAGAGTTTTAGATGCTTCTGGATGTTCAATGCTA
GCACCTTTACAGACTGGAGCAGCTCGATTTTCTTCGTATTTACTTTCAAGAGCAAGAAAAGTGCTGGGCTCACACTTATT
TTCTCCCTGTGGTGTTCCGGAGTTCTGCTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATCCATGGCGG
CAATGGTGTCCTTCCCTCCCCAGAGGTATCACTACTTTTTAGTGCTGGATTTTGAGGCCACGTGCGACAAGCCACAGATT
CATCCTCAGGAAATCATTGAGTTCCCCATCCTGAAGCTAAATGGCCGGACCATGGAGATTGAGTCTACCTTTCACATGTA
TGTCCAGCCTGTAGTCCATCCACAGCTTACCCCCTTCTGTACAGAGCTCACCGGGATTATTCAAGCCATGGTGGATGGTC
AGCCAAGCCTGCAGCAAGTGCTGGAGAGGGTCGATGAGTGGATGGCGAAGGAAGGCCTCTTAGATCCAAACGTCAAGTCA
ATTTTTGTCACCTGTGGAGACTGGGACTTAAAAGTCATGCTCCCAGGCCAGTGCCAGTACTTGGGCTTACCAGTGGCGGA
TTACTTCAAGCAGTGGATTAATCTGAAAAAGGCTTACAGCTTCGCCATGGGCTGCTGGCCCAAGAATGGACTTCTAGACA
TGAACAAGGGCCTCAGCCTGCAACACATAGGCCGGCCCCACAGCGGCATTGACGACTGCAAGAACATTGCCAACATCATG
AAGACACTCGCCTACCGAGGCTTCATCTTCAAGCAGACATCGAAACCGTTCTGA
ATGGCGACAGCCTCTCCCGCTGCTGACGGGGGGCGGGGGCGGCCCTGGGAAGGAGGGCTGGTCTCCTGGCCCCCTGCCCC
TCCCCTTACTCTCCCCTGGACTTGGATGGGCCCGAGTTGGGGGCAACACCCCGGGCATTGGGGCTTTCCAGCTTTCACAG
AACCTTCAGCATCCCCAGCTGCCGGTCTTGGGATCTTCGAAGTAAGGAGAGTTTTAGATGCTTCTGGATGTTCAATGCTA
GCACCTTTACAGACTGGAGCAGCTCGATTTTCTTCGTATTTACTTTCAAGAGCAAGAAAAGTGCTGGGCTCACACTTATT
TTCTCCCTGTGGTGTTCCGGAGTTCTGCTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATCCATGGCGG
CAATGGTGTCCTTCCCTCCCCAGAGGTATCACTACTTTTTAGTGCTGGATTTTGAGGCCACGTGCGACAAGCCACAGATT
CATCCTCAGGAAATCATTGAGTTCCCCATCCTGAAGCTAAATGGCCGGACCATGGAGATTGAGTCTACCTTTCACATGTA
TGTCCAGCCTGTAGTCCATCCACAGCTTACCCCCTTCTGTACAGAGCTCACCGGGATTATTCAAGCCATGGTGGATGGTC
AGCCAAGCCTGCAGCAAGTGCTGGAGAGGGTCGATGAGTGGATGGCGAAGGAAGGCCTCTTAGATCCAAACGTCAAGTCA
ATTTTTGTCACCTGTGGAGACTGGGACTTAAAAGTCATGCTCCCAGGCCAGTGCCAGTACTTGGGCTTACCAGTGGCGGA
TTACTTCAAGCAGTGGATTAATCTGAAAAAGGCTTACAGCTTCGCCATGGGCTGCTGGCCCAAGAATGGACTTCTAGACA
TGAACAAGGGCCTCAGCCTGCAACACATAGGCCGGCCCCACAGCGGCATTGACGACTGCAAGAACATTGCCAACATCATG
AAGACACTCGCCTACCGAGGCTTCATCTTCAAGCAGACATCGAAACCGTTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 6 .83 RPM |
| SRP051959_skeletal_muscle | 18 .19 RPM |
| SRP051959_lymph_node | 5 .59 RPM |
| SRP051959_lung | 8 .31 RPM |
| SRP051959_liver | 11 .70 RPM |
| SRP051959_kidney | 21 .83 RPM |
| SRP051959_heart | 10 .63 RPM |
| SRP051959_colon | 5 .64 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000015559 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000009400 | within_species_paralog | 1 retrogene | |
| Felis catus | ENSFCAG00000005285 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000655 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3212 | 93.54 | 86.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000003995 retrocopies