Parental gene:

PTOV1, ENSCJAG00000004105

Aliases:None
Description:prostate tumor overexpressed 1 [Source:HGNC Symbol;Acc:9632]
Organism:Marmoset (Callithrix jacchus)
Coordinates:22:41762370..41772024(+)


>ENSCJAG00000004105
TTGGTACGCGCCGGGCTCCCCCGGCAGCCGCAGTGGTTCGGCCGCGGCGACCCCTCTCCGTCGGCGCGTCCCCCGCGCTT
GCTCGTAGTGCGCGCCGTCCGCTCGCGCTCCTGGCCGGCCAGCCCCCGAGGCCCGCAGCCTCCGCGGATCCGGGCCCGCT
CGGCCCCTCCCATGGAAGGTGCTCGGGTTTTCGGGGCGCTGGGTCCCATCGGTCCCTCCTCGCCTGGGCTCACCCTCGGG
GGTCTGGCAGTGAGCGAGCACCGGCTCAGCAACAAGCTGCTGGCCTGGAGTGGCGTCCTGGAGTGGCAGGAGAAGCGCAG
ACCCTACTCTGACTCCACCGCGAAGCTGAAGCGGACCCTGCCCTGCCAAGCCTATGTGAACCAAGGGGAGAACCTGGAGA
CTGACCAGTGGCCGCAGAAGCTGATCATGCAGCTGATCCCACAGCAGCTGCTGACCACGCTGGGCCCCCTGTTCCGCAAC
TCCCAGCTGGCACAGTTCCACTTCACCAACAGAGACTGTGACTCGCTCAAGGGGCTCTGCCGAGTCATGGGCAACGGCTT
CGCGGGCTGCATGCTGTTCCCCCACATCTCCCCCTGTGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGA
TCTTCATGGGCCTCATCCCCTACGACCAGAGCGGCTTTGTCAGCGCCATCCGGCAGGTCATCACCACCCGCAAGCAGGCA
GTGGGGCCTGGTGGCGTCAACGCAGGCCCAGTGCAGATCGTCAACAACAAGTTCCTGGCGTGGAGCGGCGTCATGGAGTG
GCAGGAGAAGCCCAGGCCTGAGCCCAACAGCCGGTCCAAGAGGTGGCTGCCGTCCCACGTCTACGTGAACCAGGGAGAGA
TCCTGAGGACCGAGCAGTGGCCGAGAAAGCTGTGCATGCAGCTCATCCCGCAGCAGCTGCTGACCACGCTGGTGCCGCTG
TTCCGAAACTCGCGCCTGGTGCAGTTCCACTTCACCAAGGACCTGGAGACGCTGAAGAGCCTGTGCCGCATCATGGACAA
TGGCTTCGCTGGCTGCGTGCACTTTTCCTACAAAGCGTCGTGTGAGATCCGCGTGCTCATGCTCCTGTACTCTTCAGAGA
AGAAAATCTTCATCGGCCTCATCCCCCATGACCAGGGCAACTTTGTCAACGGCATCCGGCGCGTCATTGCCAACCAACAG
CAGGTCCTACAGCGGAACCTGGAGCAGGAGCAGCAGCAGCGAGGGATGGGGGGGTAG

Library Parental gene expression (RPM)
SRP051959_colon 4 .90 RPM
SRP051959_heart 10 .93 RPM
SRP051959_kidney 9 .38 RPM
SRP051959_liver 6 .17 RPM
SRP051959_lung 9 .21 RPM
SRP051959_lymph_node 7 .90 RPM
SRP051959_skeletal_muscle 9 .15 RPM
SRP051959_spleen 8 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003495 ortholog_one2one 1 retrogene
retro_cfam_289,
Homo sapiens ENSG00000104960 ortholog_one2one 1 retrogene
retro_hsap_2694,
Gorilla gorilla ENSGGOG00000010182 ortholog_one2one 1 retrogene
retro_ggor_1877,
Macaca mulatta ENSMMUG00000011618 ortholog_one2one 1 retrogene
retro_mmul_1426,
Nomascus leucogenys ENSNLEG00000005374 ortholog_one2one 1 retrogene
retro_nleu_1191,
Pongo abelii ENSPPYG00000010265 ortholog_one2one 1 retrogene
retro_pabe_2288,
Pan troglodytes ENSPTRG00000011321 ortholog_one2one 1 retrogene
retro_ptro_1818,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_445 96.30 90.62
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Download FASTA sequences of all ENSCJAG00000004105 retrocopies