Parental gene: | PTOV1, ENSCJAG00000004105 |
| Aliases: | None |
| Description: | prostate tumor overexpressed 1 [Source:HGNC Symbol;Acc:9632] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 22:41762370..41772024(+) |
>ENSCJAG00000004105
TTGGTACGCGCCGGGCTCCCCCGGCAGCCGCAGTGGTTCGGCCGCGGCGACCCCTCTCCGTCGGCGCGTCCCCCGCGCTT
GCTCGTAGTGCGCGCCGTCCGCTCGCGCTCCTGGCCGGCCAGCCCCCGAGGCCCGCAGCCTCCGCGGATCCGGGCCCGCT
CGGCCCCTCCCATGGAAGGTGCTCGGGTTTTCGGGGCGCTGGGTCCCATCGGTCCCTCCTCGCCTGGGCTCACCCTCGGG
GGTCTGGCAGTGAGCGAGCACCGGCTCAGCAACAAGCTGCTGGCCTGGAGTGGCGTCCTGGAGTGGCAGGAGAAGCGCAG
ACCCTACTCTGACTCCACCGCGAAGCTGAAGCGGACCCTGCCCTGCCAAGCCTATGTGAACCAAGGGGAGAACCTGGAGA
CTGACCAGTGGCCGCAGAAGCTGATCATGCAGCTGATCCCACAGCAGCTGCTGACCACGCTGGGCCCCCTGTTCCGCAAC
TCCCAGCTGGCACAGTTCCACTTCACCAACAGAGACTGTGACTCGCTCAAGGGGCTCTGCCGAGTCATGGGCAACGGCTT
CGCGGGCTGCATGCTGTTCCCCCACATCTCCCCCTGTGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGA
TCTTCATGGGCCTCATCCCCTACGACCAGAGCGGCTTTGTCAGCGCCATCCGGCAGGTCATCACCACCCGCAAGCAGGCA
GTGGGGCCTGGTGGCGTCAACGCAGGCCCAGTGCAGATCGTCAACAACAAGTTCCTGGCGTGGAGCGGCGTCATGGAGTG
GCAGGAGAAGCCCAGGCCTGAGCCCAACAGCCGGTCCAAGAGGTGGCTGCCGTCCCACGTCTACGTGAACCAGGGAGAGA
TCCTGAGGACCGAGCAGTGGCCGAGAAAGCTGTGCATGCAGCTCATCCCGCAGCAGCTGCTGACCACGCTGGTGCCGCTG
TTCCGAAACTCGCGCCTGGTGCAGTTCCACTTCACCAAGGACCTGGAGACGCTGAAGAGCCTGTGCCGCATCATGGACAA
TGGCTTCGCTGGCTGCGTGCACTTTTCCTACAAAGCGTCGTGTGAGATCCGCGTGCTCATGCTCCTGTACTCTTCAGAGA
AGAAAATCTTCATCGGCCTCATCCCCCATGACCAGGGCAACTTTGTCAACGGCATCCGGCGCGTCATTGCCAACCAACAG
CAGGTCCTACAGCGGAACCTGGAGCAGGAGCAGCAGCAGCGAGGGATGGGGGGGTAG
TTGGTACGCGCCGGGCTCCCCCGGCAGCCGCAGTGGTTCGGCCGCGGCGACCCCTCTCCGTCGGCGCGTCCCCCGCGCTT
GCTCGTAGTGCGCGCCGTCCGCTCGCGCTCCTGGCCGGCCAGCCCCCGAGGCCCGCAGCCTCCGCGGATCCGGGCCCGCT
CGGCCCCTCCCATGGAAGGTGCTCGGGTTTTCGGGGCGCTGGGTCCCATCGGTCCCTCCTCGCCTGGGCTCACCCTCGGG
GGTCTGGCAGTGAGCGAGCACCGGCTCAGCAACAAGCTGCTGGCCTGGAGTGGCGTCCTGGAGTGGCAGGAGAAGCGCAG
ACCCTACTCTGACTCCACCGCGAAGCTGAAGCGGACCCTGCCCTGCCAAGCCTATGTGAACCAAGGGGAGAACCTGGAGA
CTGACCAGTGGCCGCAGAAGCTGATCATGCAGCTGATCCCACAGCAGCTGCTGACCACGCTGGGCCCCCTGTTCCGCAAC
TCCCAGCTGGCACAGTTCCACTTCACCAACAGAGACTGTGACTCGCTCAAGGGGCTCTGCCGAGTCATGGGCAACGGCTT
CGCGGGCTGCATGCTGTTCCCCCACATCTCCCCCTGTGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGA
TCTTCATGGGCCTCATCCCCTACGACCAGAGCGGCTTTGTCAGCGCCATCCGGCAGGTCATCACCACCCGCAAGCAGGCA
GTGGGGCCTGGTGGCGTCAACGCAGGCCCAGTGCAGATCGTCAACAACAAGTTCCTGGCGTGGAGCGGCGTCATGGAGTG
GCAGGAGAAGCCCAGGCCTGAGCCCAACAGCCGGTCCAAGAGGTGGCTGCCGTCCCACGTCTACGTGAACCAGGGAGAGA
TCCTGAGGACCGAGCAGTGGCCGAGAAAGCTGTGCATGCAGCTCATCCCGCAGCAGCTGCTGACCACGCTGGTGCCGCTG
TTCCGAAACTCGCGCCTGGTGCAGTTCCACTTCACCAAGGACCTGGAGACGCTGAAGAGCCTGTGCCGCATCATGGACAA
TGGCTTCGCTGGCTGCGTGCACTTTTCCTACAAAGCGTCGTGTGAGATCCGCGTGCTCATGCTCCTGTACTCTTCAGAGA
AGAAAATCTTCATCGGCCTCATCCCCCATGACCAGGGCAACTTTGTCAACGGCATCCGGCGCGTCATTGCCAACCAACAG
CAGGTCCTACAGCGGAACCTGGAGCAGGAGCAGCAGCAGCGAGGGATGGGGGGGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 8 .17 RPM |
| SRP051959_skeletal_muscle | 9 .15 RPM |
| SRP051959_lymph_node | 7 .90 RPM |
| SRP051959_lung | 9 .21 RPM |
| SRP051959_liver | 6 .17 RPM |
| SRP051959_kidney | 9 .38 RPM |
| SRP051959_heart | 10 .93 RPM |
| SRP051959_colon | 4 .90 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000003495 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000104960 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010182 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000011618 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005374 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010265 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000011321 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_445 | 96.30 | 90.62 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000004105 retrocopies