Parental gene:

ZDHHC7, ENSCJAG00000004119

Aliases:None
Description:zinc finger, DHHC-type containing 7 [Source:HGNC Symbol;Acc:18459]
Organism:Marmoset (Callithrix jacchus)
Coordinates:20:39329215..39343708(-)


>ENSCJAG00000004119
ATGCAGCCATCAGGACACAGGCTCCGGGACGTCGAGCATCACCCTCTCCTGGCTGAAAATGACAACTATGACTCTTCATC
GTCCTCCTCCTCCGAGGCTGATGTCGCTGACAGGGTCTGGTTCATCCGTGATGGCTGCGGCATGATCTGTGCTGTCATGA
CATGGCTTCTGGTCGCCTATGCAGACTTCGTGGTGACTTTCGTTATGCTGCTGCCTTCCAAAGACTTCTGGTACTCTGTG
GTCAACGGGGTCATCTTTAACTTCTTGGCTGTGCTCGCCCTGTCGTCCCACCTGAGAACCATGCTCACCGACCCCGAAAA
ATCCATGAATGTTCCATCTGCCCGCAGAGCGAAAACTGGGCTGGACCCATCCCTTGGCAGTTGTGGTGACGGAACCGTGT
CTGTGCAAGGCTTCCTGCTTGGGGCGGTACCCAAAGGAAACGCTACAAAAGAATACATGGAGAGCCTGCAGCTGAAGCCC
GGGGAGGTGATCTACAAGTGCCCCAAGTGTTGCTGCGTTAAACCCGAGCGCGCCCACCACTGCAGTATCTGCAAAAGATG
TATTCGGAAAATGGACCATCACTGCCCGTGGGTGAACAATTGTGTAGGAGAAAAGAATCAAAGGTTCTTTGTGCTTTTCA
CTATGTATATAGCTCTGTCGTCAGTCCACGCTCTGATCCTCTGTGGGCTGCAGTTCATCTCCTGCGTCCGAGGGCAGTGG
ACTGAATGCAGTGATTTTTCACCTCCAGTAACTGTAATCCTGTTGACCTTCCTGTGCCTTGAGGGTCTTCTGTTCTTCAC
TTTCACTGCAGTTATGTTTGGCTCCCAGATCCACTCCATATGCAACGATGAGACGGAAATTGAGCGATTGAAAAGTGAGA
AGCCCACGTGGGAGCGGAGGCTGCGATGGGAAGGGATGAAGTCCGTCTTTGGGGGTCCCCCCTCACTCCTCTGGATGAAT
CCCTTTGTCGGCTTTCACTTTAGGCGACTGCCCACGAGACCCAGAAAAGGCAGCCCGGAGTTCTCAGTGTGA

Library Parental gene expression (RPM)
SRP051959_colon 6 .79 RPM
SRP051959_heart 8 .52 RPM
SRP051959_kidney 22 .87 RPM
SRP051959_liver 5 .42 RPM
SRP051959_lung 13 .00 RPM
SRP051959_lymph_node 9 .82 RPM
SRP051959_skeletal_muscle 12 .54 RPM
SRP051959_spleen 13 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000011824 other_paralog 1 retrogene
retro_cjac_934,
Echinops telfairi ENSETEG00000016077 ortholog_one2one 1 retrogene
retro_etel_1105,
Microcebus murinus ENSMICG00000011194 ortholog_one2one 1 retrogene
retro_mmur_1362,
Macaca mulatta ENSMMUG00000020674 ortholog_one2one 1 retrogene
retro_mmul_1448,
Sus scrofa ENSSSCG00000002667 ortholog_one2one 1 retrogene
retro_sscr_267,
Tursiops truncatus ENSTTRG00000016028 ortholog_one2one 1 retrogene
retro_ttru_363,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1437 79.48 73.05
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Download FASTA sequences of all ENSCJAG00000004119 retrocopies