Parental gene: | ZDHHC7, ENSCJAG00000004119 |
| Aliases: | None |
| Description: | zinc finger, DHHC-type containing 7 [Source:HGNC Symbol;Acc:18459] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 20:39329215..39343708(-) |
>ENSCJAG00000004119
ATGCAGCCATCAGGACACAGGCTCCGGGACGTCGAGCATCACCCTCTCCTGGCTGAAAATGACAACTATGACTCTTCATC
GTCCTCCTCCTCCGAGGCTGATGTCGCTGACAGGGTCTGGTTCATCCGTGATGGCTGCGGCATGATCTGTGCTGTCATGA
CATGGCTTCTGGTCGCCTATGCAGACTTCGTGGTGACTTTCGTTATGCTGCTGCCTTCCAAAGACTTCTGGTACTCTGTG
GTCAACGGGGTCATCTTTAACTTCTTGGCTGTGCTCGCCCTGTCGTCCCACCTGAGAACCATGCTCACCGACCCCGAAAA
ATCCATGAATGTTCCATCTGCCCGCAGAGCGAAAACTGGGCTGGACCCATCCCTTGGCAGTTGTGGTGACGGAACCGTGT
CTGTGCAAGGCTTCCTGCTTGGGGCGGTACCCAAAGGAAACGCTACAAAAGAATACATGGAGAGCCTGCAGCTGAAGCCC
GGGGAGGTGATCTACAAGTGCCCCAAGTGTTGCTGCGTTAAACCCGAGCGCGCCCACCACTGCAGTATCTGCAAAAGATG
TATTCGGAAAATGGACCATCACTGCCCGTGGGTGAACAATTGTGTAGGAGAAAAGAATCAAAGGTTCTTTGTGCTTTTCA
CTATGTATATAGCTCTGTCGTCAGTCCACGCTCTGATCCTCTGTGGGCTGCAGTTCATCTCCTGCGTCCGAGGGCAGTGG
ACTGAATGCAGTGATTTTTCACCTCCAGTAACTGTAATCCTGTTGACCTTCCTGTGCCTTGAGGGTCTTCTGTTCTTCAC
TTTCACTGCAGTTATGTTTGGCTCCCAGATCCACTCCATATGCAACGATGAGACGGAAATTGAGCGATTGAAAAGTGAGA
AGCCCACGTGGGAGCGGAGGCTGCGATGGGAAGGGATGAAGTCCGTCTTTGGGGGTCCCCCCTCACTCCTCTGGATGAAT
CCCTTTGTCGGCTTTCACTTTAGGCGACTGCCCACGAGACCCAGAAAAGGCAGCCCGGAGTTCTCAGTGTGA
ATGCAGCCATCAGGACACAGGCTCCGGGACGTCGAGCATCACCCTCTCCTGGCTGAAAATGACAACTATGACTCTTCATC
GTCCTCCTCCTCCGAGGCTGATGTCGCTGACAGGGTCTGGTTCATCCGTGATGGCTGCGGCATGATCTGTGCTGTCATGA
CATGGCTTCTGGTCGCCTATGCAGACTTCGTGGTGACTTTCGTTATGCTGCTGCCTTCCAAAGACTTCTGGTACTCTGTG
GTCAACGGGGTCATCTTTAACTTCTTGGCTGTGCTCGCCCTGTCGTCCCACCTGAGAACCATGCTCACCGACCCCGAAAA
ATCCATGAATGTTCCATCTGCCCGCAGAGCGAAAACTGGGCTGGACCCATCCCTTGGCAGTTGTGGTGACGGAACCGTGT
CTGTGCAAGGCTTCCTGCTTGGGGCGGTACCCAAAGGAAACGCTACAAAAGAATACATGGAGAGCCTGCAGCTGAAGCCC
GGGGAGGTGATCTACAAGTGCCCCAAGTGTTGCTGCGTTAAACCCGAGCGCGCCCACCACTGCAGTATCTGCAAAAGATG
TATTCGGAAAATGGACCATCACTGCCCGTGGGTGAACAATTGTGTAGGAGAAAAGAATCAAAGGTTCTTTGTGCTTTTCA
CTATGTATATAGCTCTGTCGTCAGTCCACGCTCTGATCCTCTGTGGGCTGCAGTTCATCTCCTGCGTCCGAGGGCAGTGG
ACTGAATGCAGTGATTTTTCACCTCCAGTAACTGTAATCCTGTTGACCTTCCTGTGCCTTGAGGGTCTTCTGTTCTTCAC
TTTCACTGCAGTTATGTTTGGCTCCCAGATCCACTCCATATGCAACGATGAGACGGAAATTGAGCGATTGAAAAGTGAGA
AGCCCACGTGGGAGCGGAGGCTGCGATGGGAAGGGATGAAGTCCGTCTTTGGGGGTCCCCCCTCACTCCTCTGGATGAAT
CCCTTTGTCGGCTTTCACTTTAGGCGACTGCCCACGAGACCCAGAAAAGGCAGCCCGGAGTTCTCAGTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 13 .11 RPM |
| SRP051959_skeletal_muscle | 12 .54 RPM |
| SRP051959_lymph_node | 9 .82 RPM |
| SRP051959_lung | 13 .00 RPM |
| SRP051959_liver | 5 .42 RPM |
| SRP051959_kidney | 22 .87 RPM |
| SRP051959_heart | 8 .52 RPM |
| SRP051959_colon | 6 .79 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000011824 | other_paralog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000016077 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000011194 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020674 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000002667 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016028 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1437 | 79.48 | 73.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000004119 retrocopies