Parental gene: | SOX7, ENSCJAG00000004168 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 13:7708886..7837310(+) |
>ENSCJAG00000004168
ATGTCGATGCTGGCTGAGCGTCGGCGGAAGCAGAAGTGGGCTGTGGACCCTCAGAACACTGCCTGGAGTAATGACGACTC
CAGGTTCGGCCAGAGGATGCTGGAGAAGATGGGGTGGTCTAAAGGAAAGGGTTTAGGGGCTCAGGAGCAAGGAGCCACAG
ATCATATTAAAGTTCAAGTGAAAAATAACCACCTGGGACTTGGAGCCACCATCAATAACGAAGACAACTGGATTGCACAT
CAGGATGATTTTAACCAGCTTCTGGCTGAACTGAACACTTGCCATGGGCAGGAAACCTCAGACTCCTCAGACAAGAAGGA
AAAGAAATCTTTTAGCCTTGAGGAAAAGTCCAAAATCTCCAAAAACCGTGTTCACTATATGAAATTCACAAAAGGAAAGT
CATGGAAGGCGCTGACGCTGTCCCAGAAGAGGCCGTACGTGGACGAGGCGGAGCGGCTGCGCCTGCAGCATATGCAGGAC
TACCCCAACTACAAGTACCGGCCGCGCAGGAAGAAGCAGGCCAAGCGGCTGTGCAAGCGCGTGGACCCCGGCTTCCTCCT
GAGCTCCCTCTCACGAGACCAGAACGTCCTGCCGGAGAAGAGGAGCGGCAGCCGGGGGGCGCTGGGGGAGAAAGAGGACA
GGGGTGAGTACTCCCCCAGCACCGCCCTGCCCAGCCTCCGCGGCTGCTACCACGAGGGGCCGGCTGGTGGCGGAGGCACC
CCGAGCAGTGTGGACACGTACCCCTACGGGCTGCCCACACCCCCTGAAATGTCTCCCCTGGACGTGCTGGAGCCGGAGCA
GACCTTCTTCTCCTCCCCCTGCCAGGAGGAGCACGGCCACCCCCGCCGCATCCCCCACCTTCCCGGGCCCCCTTACTCAC
CAGAGTACACCCCCAGCCCCCTCCACTGTAGCCACCCCCTGGGCTCCCTGGCCCTTGGCCAGTCCCCCGGAGTCTCCATG
ATGTCCCCTGTATCCGGCTGTCCCCCATCTCCTGCCTATTACTCCCCGGCCACCTACCACCCTCTCCACTCCAACCTCCA
AGCCCACCTGGGCCAGCTCTCCCCGCCTCCCGAGCACCCTGGCTTCGATGCTCTGGATCAACTGAGCCAGGTGGAACTCC
TGGGGGACATGGATCGCAATGAATTCGACCAGTATTTGAACACTCCTGGCCACCCAGACTCCGCCACAGGGGCTGTGGCC
CTCAGTGGCCATGTACCGGTCTCCCAGATGACATCAACGGGTCCCACAGAGACCAGCCTCATCTCCGTCCTTGCTGATGC
CACAGCCACATACTACAACAGCTACAGTGTGTCGTAG
ATGTCGATGCTGGCTGAGCGTCGGCGGAAGCAGAAGTGGGCTGTGGACCCTCAGAACACTGCCTGGAGTAATGACGACTC
CAGGTTCGGCCAGAGGATGCTGGAGAAGATGGGGTGGTCTAAAGGAAAGGGTTTAGGGGCTCAGGAGCAAGGAGCCACAG
ATCATATTAAAGTTCAAGTGAAAAATAACCACCTGGGACTTGGAGCCACCATCAATAACGAAGACAACTGGATTGCACAT
CAGGATGATTTTAACCAGCTTCTGGCTGAACTGAACACTTGCCATGGGCAGGAAACCTCAGACTCCTCAGACAAGAAGGA
AAAGAAATCTTTTAGCCTTGAGGAAAAGTCCAAAATCTCCAAAAACCGTGTTCACTATATGAAATTCACAAAAGGAAAGT
CATGGAAGGCGCTGACGCTGTCCCAGAAGAGGCCGTACGTGGACGAGGCGGAGCGGCTGCGCCTGCAGCATATGCAGGAC
TACCCCAACTACAAGTACCGGCCGCGCAGGAAGAAGCAGGCCAAGCGGCTGTGCAAGCGCGTGGACCCCGGCTTCCTCCT
GAGCTCCCTCTCACGAGACCAGAACGTCCTGCCGGAGAAGAGGAGCGGCAGCCGGGGGGCGCTGGGGGAGAAAGAGGACA
GGGGTGAGTACTCCCCCAGCACCGCCCTGCCCAGCCTCCGCGGCTGCTACCACGAGGGGCCGGCTGGTGGCGGAGGCACC
CCGAGCAGTGTGGACACGTACCCCTACGGGCTGCCCACACCCCCTGAAATGTCTCCCCTGGACGTGCTGGAGCCGGAGCA
GACCTTCTTCTCCTCCCCCTGCCAGGAGGAGCACGGCCACCCCCGCCGCATCCCCCACCTTCCCGGGCCCCCTTACTCAC
CAGAGTACACCCCCAGCCCCCTCCACTGTAGCCACCCCCTGGGCTCCCTGGCCCTTGGCCAGTCCCCCGGAGTCTCCATG
ATGTCCCCTGTATCCGGCTGTCCCCCATCTCCTGCCTATTACTCCCCGGCCACCTACCACCCTCTCCACTCCAACCTCCA
AGCCCACCTGGGCCAGCTCTCCCCGCCTCCCGAGCACCCTGGCTTCGATGCTCTGGATCAACTGAGCCAGGTGGAACTCC
TGGGGGACATGGATCGCAATGAATTCGACCAGTATTTGAACACTCCTGGCCACCCAGACTCCGCCACAGGGGCTGTGGCC
CTCAGTGGCCATGTACCGGTCTCCCAGATGACATCAACGGGTCCCACAGAGACCAGCCTCATCTCCGTCCTTGCTGATGC
CACAGCCACATACTACAACAGCTACAGTGTGTCGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 3 .30 RPM |
| SRP051959_skeletal_muscle | 6 .81 RPM |
| SRP051959_lymph_node | 3 .31 RPM |
| SRP051959_lung | 10 .30 RPM |
| SRP051959_liver | 2 .99 RPM |
| SRP051959_kidney | 3 .28 RPM |
| SRP051959_heart | 6 .51 RPM |
| SRP051959_colon | 2 .17 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000008531 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2136 | 84.40 | 99.09 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000004168 retrocopies