Parental gene: | STK24, ENSCJAG00000004508 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:13609837..13747400(-) |
>ENSCJAG00000004508
ATGCTGGAGCACATACCCTTAGAGAGCGGCTGCTCAGAACTCAAGAACCTAAAGGCAGATCCAGAAGAGCTTTTTACAAA
ACTAGAGAAAATTGGGAAGGGCTCCTTTGGCGAAGTGTTTAAAGGCATTGACAATCGGACTCAGAAAGTGGTTGCCATAA
AAATCATTGACCTGGAAGAAGCTGAAGATGAGATAGAGGACATTCAACAAGAAATCACAGTGCTGAGTCAGTGTGACAGT
CCATACGTAACCAAATATTATGGATCCTATCTGAAGGATACAAAACTATGGATAATAATGGAATATCTTGGTGGAGGCTC
CGCACTAGATCTATTAGAACCTGGCTCATTAGATGAAACCCAGATCGCTACTATATTAAGAGAAATACTGAAAGGACTTG
ATTATCTCCATTCAGAGAAGAAAATCCATAGAGACATTAAAGCGGCCAACGTCCTGCTGTCTGAGCATGGTGAGGTGAAG
CTGGCGGACTTTGGCGTGGCTGGCCAGCTGACCGACACCCAGATCAAAAGGAACACCTTTGTGGGCACCCCGTTCTGGAT
GGCACCCGAGGTCATCAAGCAGTCGGCCTACGACTCCAAGGCAGATATCTGGTCCCTGGGCATAACAGCTATTGAACTTG
CAAGAGGGGAACCACCTCATTCCGAGCTGCACCCCATGAAAGTTTTATTCCTCATTCCAAAGAACAACCCACCAACATTG
GAAGGAAACTACAGCAAACCCCTCAAGGAGTTTGTGGAGGCCTGTTTGAATAAGGAGCCGAGCTTTAGACCCACTGCTAG
GGAGTTACTGAAGCACAAGTTTATCCTACGCAATGCAAAGAAAACTTCCTACTTGACCGAGCTCATCGACAGGTACAAGA
GATGGAAGGCGGAGCAGAGCCATGAGGACTCAAGCTCTGAGGATTCTGATGCGGAAACAGATGGCCAAGCTGGGGGAAGT
GATTCTGGGGACTGGATCTTCACAATCCGAGAAAAAGATCCCAAGAATCTCGAGGGAGCTCTTCAGCCGTCAGACTTAGA
CGGAAACAAGAAGAAAGACATCCCAAAGAGGCCTTTCTCTCAGTGTTTATCTACAATTATTTCTCCTCTGTTTGCAGAGT
TGAAGGAGAAGAGCCAGGCATGTGGAGGGAACTTGGGGTCCATTGAAGAGCTTCGAGGGGCCATCTACCTGGCAGAGGAG
GCGTGCCCCGGCATCTCCGACACCATGGTGGCGCAGCTCGTGCAACGACTCCAGAGATATTCTCTAAGTGGTGGAGGAAC
TTCATCCCACTGA
ATGCTGGAGCACATACCCTTAGAGAGCGGCTGCTCAGAACTCAAGAACCTAAAGGCAGATCCAGAAGAGCTTTTTACAAA
ACTAGAGAAAATTGGGAAGGGCTCCTTTGGCGAAGTGTTTAAAGGCATTGACAATCGGACTCAGAAAGTGGTTGCCATAA
AAATCATTGACCTGGAAGAAGCTGAAGATGAGATAGAGGACATTCAACAAGAAATCACAGTGCTGAGTCAGTGTGACAGT
CCATACGTAACCAAATATTATGGATCCTATCTGAAGGATACAAAACTATGGATAATAATGGAATATCTTGGTGGAGGCTC
CGCACTAGATCTATTAGAACCTGGCTCATTAGATGAAACCCAGATCGCTACTATATTAAGAGAAATACTGAAAGGACTTG
ATTATCTCCATTCAGAGAAGAAAATCCATAGAGACATTAAAGCGGCCAACGTCCTGCTGTCTGAGCATGGTGAGGTGAAG
CTGGCGGACTTTGGCGTGGCTGGCCAGCTGACCGACACCCAGATCAAAAGGAACACCTTTGTGGGCACCCCGTTCTGGAT
GGCACCCGAGGTCATCAAGCAGTCGGCCTACGACTCCAAGGCAGATATCTGGTCCCTGGGCATAACAGCTATTGAACTTG
CAAGAGGGGAACCACCTCATTCCGAGCTGCACCCCATGAAAGTTTTATTCCTCATTCCAAAGAACAACCCACCAACATTG
GAAGGAAACTACAGCAAACCCCTCAAGGAGTTTGTGGAGGCCTGTTTGAATAAGGAGCCGAGCTTTAGACCCACTGCTAG
GGAGTTACTGAAGCACAAGTTTATCCTACGCAATGCAAAGAAAACTTCCTACTTGACCGAGCTCATCGACAGGTACAAGA
GATGGAAGGCGGAGCAGAGCCATGAGGACTCAAGCTCTGAGGATTCTGATGCGGAAACAGATGGCCAAGCTGGGGGAAGT
GATTCTGGGGACTGGATCTTCACAATCCGAGAAAAAGATCCCAAGAATCTCGAGGGAGCTCTTCAGCCGTCAGACTTAGA
CGGAAACAAGAAGAAAGACATCCCAAAGAGGCCTTTCTCTCAGTGTTTATCTACAATTATTTCTCCTCTGTTTGCAGAGT
TGAAGGAGAAGAGCCAGGCATGTGGAGGGAACTTGGGGTCCATTGAAGAGCTTCGAGGGGCCATCTACCTGGCAGAGGAG
GCGTGCCCCGGCATCTCCGACACCATGGTGGCGCAGCTCGTGCAACGACTCCAGAGATATTCTCTAAGTGGTGGAGGAAC
TTCATCCCACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 37 .50 RPM |
| SRP051959_skeletal_muscle | 15 .77 RPM |
| SRP051959_lymph_node | 38 .79 RPM |
| SRP051959_lung | 37 .01 RPM |
| SRP051959_liver | 29 .93 RPM |
| SRP051959_kidney | 44 .37 RPM |
| SRP051959_heart | 28 .43 RPM |
| SRP051959_colon | 92 .54 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006066 | within_species_paralog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000006610 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000102572 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001983 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000009173 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007854 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_4221 | 81.44 | 66.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000004508 retrocopies