Parental gene: | COX10, ENSCJAG00000004522 |
| Aliases: | None |
| Description: | Protoheme IX farnesyltransferase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:F6VLK0] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:67339948..67470477(-) |
>ENSCJAG00000004522
ATGGCCGCGTCTCCGCACACTCTCTCCTCACGCCTCCTGACAGGTTGGGTAGGAGGATGTGTCTGGTATCTTGAAAGAAG
AACAATACAGGAATCCCCTCACAAGTTCTTGCATCTTGTCAGGAATGTCAATAAGCAGTGGATTACATTTCAGCACTTTA
GCTTCCTCAGACGCATGTATGTCACACAGCTGAACAGAAGCCACAACCAGCAAGTAAAACCCAAGCCAGAACCAGTAGCA
TCTACTTTCCTTGAAAAAACATCTTCAGGTCAAGCCAAAGCAGAGATATATGAGATGAGACCTCTTTCACCACCCAGCCT
TTCTTCGTCCAGAAAACCAAATGAAAAGGAATTGATAGAACTAGAGCTGGCCTCAGAAATTGAAGAGTCAATAGATGTAG
GGAAAGAGACAAAAGATGAAAAGCAGTGGAAAGAGATGAAGCTGCAAGTGGATGATTTGCCAGGAATTTTGGCTCGACTA
TCCAAAATCAAACTCACAGCGCTGGTAGTAAGTACCACTTCAGCTGGATTTGCATTGGCTCCGGGCCCTTTTGACTTCCC
CTGTTTCCTGCTTACATCTATTGGGACAGGCCTTGCATCCTGCGCTGCCAACTCCATCAATCAGTTTTTTGAGGTACCAT
TTGACTCAAACATGAATAGGACAAAGAACAGACCTCTGGTTCGTGGGCAGATCAGCCCGTTGTTAGCCGTGTCTTTTGCC
ACTTGCTGTGCTGTTCCTGGAGTTGCCATTCTCACCTGGGGGGTGAATCCACTCACAGGAGCCCTGGGGCTCTTCAACAT
TTTCCTGTATACCTGCTGCTACACACCACTGAAGAGGATTAGCATTGCTAACACATGGGTCGGAGCCGTGGTTGGAGCCA
TCCCGCCTGTCATGGGCTGGACAGCGGCCACAGGCAGCCTCGATGCTGGTGCGTTTCTCCTGGGAGGAATCCTCTACTCC
TGGCAGTTTCCTCATTTCAACGCCCTGAGCTGGGGCCTCCGTGAAGACTACTCTCGGGGCGGATACTGCATGATGTCGGT
CACCCACCCGGGCCTGTGCCGGCGCGTGGCACTGCGCCACTGCCTGGCCCTGCTGGCGCTCTCCGTGGCAGCCCCCGTCC
TGGACATCACCACTTGGACCTTCCCCGTCATTGCCCTCCCAATCAATGCCTACATTTCCTACCTCGGCTTCCGCTTCTAC
GTGGACGCAGACCGCAGGAGCTCGCGGAGACTGTTCTTCTGCAGCCTGTGGCACCTGCCGCTGCTGCTACTGCTCATGCT
CACCTGCAAGCAGCGGCGCGGGGGCGGGGACCCGGGGCCCCCTCCCAGCTAA
ATGGCCGCGTCTCCGCACACTCTCTCCTCACGCCTCCTGACAGGTTGGGTAGGAGGATGTGTCTGGTATCTTGAAAGAAG
AACAATACAGGAATCCCCTCACAAGTTCTTGCATCTTGTCAGGAATGTCAATAAGCAGTGGATTACATTTCAGCACTTTA
GCTTCCTCAGACGCATGTATGTCACACAGCTGAACAGAAGCCACAACCAGCAAGTAAAACCCAAGCCAGAACCAGTAGCA
TCTACTTTCCTTGAAAAAACATCTTCAGGTCAAGCCAAAGCAGAGATATATGAGATGAGACCTCTTTCACCACCCAGCCT
TTCTTCGTCCAGAAAACCAAATGAAAAGGAATTGATAGAACTAGAGCTGGCCTCAGAAATTGAAGAGTCAATAGATGTAG
GGAAAGAGACAAAAGATGAAAAGCAGTGGAAAGAGATGAAGCTGCAAGTGGATGATTTGCCAGGAATTTTGGCTCGACTA
TCCAAAATCAAACTCACAGCGCTGGTAGTAAGTACCACTTCAGCTGGATTTGCATTGGCTCCGGGCCCTTTTGACTTCCC
CTGTTTCCTGCTTACATCTATTGGGACAGGCCTTGCATCCTGCGCTGCCAACTCCATCAATCAGTTTTTTGAGGTACCAT
TTGACTCAAACATGAATAGGACAAAGAACAGACCTCTGGTTCGTGGGCAGATCAGCCCGTTGTTAGCCGTGTCTTTTGCC
ACTTGCTGTGCTGTTCCTGGAGTTGCCATTCTCACCTGGGGGGTGAATCCACTCACAGGAGCCCTGGGGCTCTTCAACAT
TTTCCTGTATACCTGCTGCTACACACCACTGAAGAGGATTAGCATTGCTAACACATGGGTCGGAGCCGTGGTTGGAGCCA
TCCCGCCTGTCATGGGCTGGACAGCGGCCACAGGCAGCCTCGATGCTGGTGCGTTTCTCCTGGGAGGAATCCTCTACTCC
TGGCAGTTTCCTCATTTCAACGCCCTGAGCTGGGGCCTCCGTGAAGACTACTCTCGGGGCGGATACTGCATGATGTCGGT
CACCCACCCGGGCCTGTGCCGGCGCGTGGCACTGCGCCACTGCCTGGCCCTGCTGGCGCTCTCCGTGGCAGCCCCCGTCC
TGGACATCACCACTTGGACCTTCCCCGTCATTGCCCTCCCAATCAATGCCTACATTTCCTACCTCGGCTTCCGCTTCTAC
GTGGACGCAGACCGCAGGAGCTCGCGGAGACTGTTCTTCTGCAGCCTGTGGCACCTGCCGCTGCTGCTACTGCTCATGCT
CACCTGCAAGCAGCGGCGCGGGGGCGGGGACCCGGGGCCCCCTCCCAGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 3 .45 RPM |
| SRP051959_skeletal_muscle | 11 .42 RPM |
| SRP051959_lymph_node | 4 .54 RPM |
| SRP051959_lung | 3 .69 RPM |
| SRP051959_liver | 3 .16 RPM |
| SRP051959_kidney | 5 .57 RPM |
| SRP051959_heart | 7 .59 RPM |
| SRP051959_colon | 4 .93 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000015294 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000017899 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000010334 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007457 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3938 | 87.64 | 98.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000004522 retrocopies