Parental gene: | DNAJB1, ENSCJAG00000004666 |
| Aliases: | None |
| Description: | DnaJ (Hsp40) homolog, subfamily B, member 1 [Source:HGNC Symbol;Acc:5270] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 22:13786279..13796655(-) |
>ENSCJAG00000004666
ATGGGCAAAGACTACTACCAGACGCTGGGCCTGTCCCGCGGCGCGTCGGACGAGGAGATCAAGCGGGCCTACCGTCGCCA
GGCGCTGCGCTACCACCCGGACAAGAACAAGGAGCCCGGCGCCGAGGAGAAGTTCAAGGAGATCGCCGAGGCCTACGACG
TGCTAAGCGACCCGCGCAAGCGCGAGATCTTTGACCGCTACGGGGAGGAAGGGTTAAAGGGCAGCGGCCCCAGAGGCGGT
AGCGGTGGTGGTGCCAATGGTACCTCTTTCAGCTACACATTCCATGGAGATCCTCATGCCATGTTTGCTGAATTCTTCGG
TGGCAGAAATCCCTTTGACACCTTTTTTGGGCAGCGGAACGGGGAGGAAGGCATGGACATTGACGACCCATTCTCTGGCT
TCCATATGGGCATGGGTGGCTTCACCAACATGAACTTTGGCCGCTCCCGCCCTGCCCAAGAGCCCGCCCGAAAGAAGCAA
GATCCTCCAGTCACCCACGACCTTCGGGTCTCCCTTGAAGAGATCTACAGCGGCTGCACCAAGAAGATGAAAATCTCCCA
CAAGCGGCTAAACCCCGATGGAAAGAGCATTCGAAATGAAGACAAAATCTTGACCATCGAAGTGAAGAAGGGGTGGAAAG
AAGGGACCAAAATCACATTCCCCAAGGAAGGAGACCAGACCTCCAACAACATTCCAGCTGATATTGTCTTTGTTTTAAAG
GACAAGCCACACAATATCTTTAAGAGAGATGGCTCTGATGTCATTTATCCTGCCAGGATCAGCCTCCGGGAGGCTTTGTG
TGGCTGCACAGTGAACGTCCCTACTCTGGACGGCAGGACCATACCCGTGGTGTTCAAAGATGTCATCAGGCCTGGCATGC
GTCGAAAAGTTCCTGGAGAAGGCCTCCCCCTCCCCAAAACGCCCGAGAAACGTGGGGACCTCATTATTGAGTTTGAAGTG
ATCTTCCCCGAAAGGATTCCCCAGACATCAAGATCTGCACTTGAGAAGGTTCTTCCGATATAG
ATGGGCAAAGACTACTACCAGACGCTGGGCCTGTCCCGCGGCGCGTCGGACGAGGAGATCAAGCGGGCCTACCGTCGCCA
GGCGCTGCGCTACCACCCGGACAAGAACAAGGAGCCCGGCGCCGAGGAGAAGTTCAAGGAGATCGCCGAGGCCTACGACG
TGCTAAGCGACCCGCGCAAGCGCGAGATCTTTGACCGCTACGGGGAGGAAGGGTTAAAGGGCAGCGGCCCCAGAGGCGGT
AGCGGTGGTGGTGCCAATGGTACCTCTTTCAGCTACACATTCCATGGAGATCCTCATGCCATGTTTGCTGAATTCTTCGG
TGGCAGAAATCCCTTTGACACCTTTTTTGGGCAGCGGAACGGGGAGGAAGGCATGGACATTGACGACCCATTCTCTGGCT
TCCATATGGGCATGGGTGGCTTCACCAACATGAACTTTGGCCGCTCCCGCCCTGCCCAAGAGCCCGCCCGAAAGAAGCAA
GATCCTCCAGTCACCCACGACCTTCGGGTCTCCCTTGAAGAGATCTACAGCGGCTGCACCAAGAAGATGAAAATCTCCCA
CAAGCGGCTAAACCCCGATGGAAAGAGCATTCGAAATGAAGACAAAATCTTGACCATCGAAGTGAAGAAGGGGTGGAAAG
AAGGGACCAAAATCACATTCCCCAAGGAAGGAGACCAGACCTCCAACAACATTCCAGCTGATATTGTCTTTGTTTTAAAG
GACAAGCCACACAATATCTTTAAGAGAGATGGCTCTGATGTCATTTATCCTGCCAGGATCAGCCTCCGGGAGGCTTTGTG
TGGCTGCACAGTGAACGTCCCTACTCTGGACGGCAGGACCATACCCGTGGTGTTCAAAGATGTCATCAGGCCTGGCATGC
GTCGAAAAGTTCCTGGAGAAGGCCTCCCCCTCCCCAAAACGCCCGAGAAACGTGGGGACCTCATTATTGAGTTTGAAGTG
ATCTTCCCCGAAAGGATTCCCCAGACATCAAGATCTGCACTTGAGAAGGTTCTTCCGATATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 51 .87 RPM |
| SRP051959_skeletal_muscle | 23 .54 RPM |
| SRP051959_lymph_node | 34 .86 RPM |
| SRP051959_lung | 48 .62 RPM |
| SRP051959_liver | 52 .57 RPM |
| SRP051959_kidney | 34 .48 RPM |
| SRP051959_heart | 21 .31 RPM |
| SRP051959_colon | 60 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000005288 | other_paralog | 7 retrogenes | |
| Pongo abelii | ENSPPYG00000009647 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000010594 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000021824 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_463 | 91.20 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000004666 retrocopies