Parental gene:

ENSCJAG00000004797

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:17:18850088..18858197(-)


>ENSCJAG00000004797
GACCAAGCCACCCTGGTAGAACAAGTAAAAAGAGTAAAAGAAATTGAAGCTATTGAAAGTGATTCTTTTGTTCAGCAGAC
ATTCAGATCAAGTAAAGAAGTCAAAAAGTCAGTGGAACCTAGTGAAGTGAAACAGACAACTTCAACATCAGGACCAGCAT
CAGCAGTTGTTGAACCACCCAGTACTGAAAAAGAAATAGATCCTAGCAGCATCCCTACTGCTATCAAGTACCAAGATGAC
AATTCCCTGGCCCATCCAAATTTATTTATCGAGAAAGCTGATGCTGAGGAAAGATGGTTCAAGAGGTTAATTGCTCTCCG
ACAAGAAAGACTAATGGGCAGTCCTGTGGCCTAA

Library Parental gene expression (RPM)
SRP051959_spleen 2 .14 RPM
SRP051959_skeletal_muscle 1 .03 RPM
SRP051959_lymph_node 2 .08 RPM
SRP051959_lung 1 .81 RPM
SRP051959_liver 2 .38 RPM
SRP051959_kidney 1 .86 RPM
SRP051959_heart 1 .44 RPM
SRP051959_colon 1 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000000876 ortholog_one2many 2 retrogenes
retro_cpor_618, retro_cpor_671,
Echinops telfairi ENSETEG00000017217 ortholog_one2many 1 retrogene
retro_etel_1555,
Homo sapiens ENSG00000174891 ortholog_one2many 1 retrogene
retro_hsap_4281,
Mus musculus ENSMUSG00000034544 ortholog_one2many 1 retrogene
retro_mmus_666,
Nomascus leucogenys ENSNLEG00000004137 ortholog_one2many 1 retrogene
retro_nleu_2851,
Rattus norvegicus ENSRNOG00000012639 ortholog_one2many 2 retrogenes
retro_rnor_2454, retro_rnor_577,
Tupaia belangeri ENSTBEG00000001973 ortholog_one2many 13 retrogenes
retro_tbel_1285, retro_tbel_1372, retro_tbel_2078, retro_tbel_2400, retro_tbel_2545, retro_tbel_3145, retro_tbel_3313, retro_tbel_3748, retro_tbel_3834, retro_tbel_4317, retro_tbel_4458, retro_tbel_4494, retro_tbel_840,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_553 72.27 100.00
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Download FASTA sequences of all ENSCJAG00000004797 retrocopies