Parental gene: | MBD1, ENSCJAG00000004959 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 13:88225269..88239781(-) |
>ENSCJAG00000004959
ATGGGGGGATTTAGGCTGAGGACGGGAAGGAATGGAGCTCAGAACTCTGACAGGCTACTGCAGCTTCCTGTGGCCTCCAT
GGCTGAGGACTGGCTGGATTGCCCAGCCCTGGGCCCTGGCTGGAAGCGCCGTGAAGTCTTTCGCAAGTCAGGGGCTACCT
GCGGACGCTCAGACACCTATTACCAGAGCCCCACAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCGATACCTGGGC
CCTGCGTGTGATCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTGTTATCCAGCCCCCAAGGCCCATTCCGTGGCTGT
CACCAGCAAGAAGCGAAAGAAGCCTTCCAGACCATCCAAGACTCAGAAACATCAGGTTGGACCCCAGAGTGGTGAGGTCA
GGAAGGAGGCCCCAAAGGATGAGACCAAGGCTGACACTGTCACAGTCCCAGCTTCATTCCCTGCTCCTGGATGCTGTGAG
AACTGTGGCATCAGCTTCTCAGGGGATGGCACCCAAAGACAGCGGCTCAAAACATTGTGCAAGGACTGCCGAGCACAGAG
AATTGCCTTCAACCGGGAACAGAGAATGTTTAAGCGTGTGGGCTGTGGGGAGTGTGCAGCCTGCCAGGTAACAGAAGACT
GTGGGGCCTGCTCCACCTGCCTCCTGCAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGCAAGTGTGAGCGGAGACGC
TGCCTCCGGATTGTGGAAAGGAGCCGAGGGTGTGGAGTATGCCGGGGCTGTCAGACCCAAGAGGACTGTGGCCGTTGCCG
CATCTGCCTTCGCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACGGCACCTTGCTC
ACCGCCTGCGTCGCCGTCATCAGAGATGTCAGCGACGCACTCCCCTGACTGTGGCTCCCCCCACTGGTAAACATGGCCGC
CGCAGGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCGGCATCCCGGTGCCCAACCACTGCCTCCACCTCCACCATCACA
GTCCCCCGAGCCCACAGAGCCGCACCCCAGAGCCCTGACCCCCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAGACG
AGGACGAGCTACAGCCCTACACGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGCAGCCTGCCTACGGCGGATGGAC
TGTGGCCGCTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCA
ATGCCTGCAGTTTGCCATGAAGCGACTGCTGCCCAGTGTCTGGTCAGAGTCTGAGGATGGGGCAGGATCGCCCCCACCTT
ACCGTCGTCGAAAGAGGCCCAGCTCTGCCCAGCGGCACCATCTTGGCCCTACCTTGAAGCCCACCTTGGTTACACGCACA
GCCCGACCAGACCATACCCGGGCTCCATCGAAGCAGGAAGCAGGTGGTGGCTTTGTGCTGCCTCCGCCTGGCACTGACCT
TGTGTTTTTACGGGAGGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGTTGCAGCTTCCACGGAAGCCCTGTTGCAGG
AGGCCCAGTGCTCTGGCCTGAGTTGGGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATACCCAGGACGAGTGG
ACACCAGGCACAGCTGTCCTGACTTCTCCTGTATTGGTGCCTGGCTGCCCTAGCAAGGCAGTAGACCCCAGCCTGCCATC
TGTGAAGCAAGAGCCACCTGACCCTGAGGAGGACAAGGAGGAGAACAAGGATGACTCTGCCTCCAAATTGGCCCCAGAGG
AGGAGGCAGGAGGGGCTGGCACACCCGTGATCACGGAGATTTTCAGCCTGGGTGGAACCCGCTTCCGAGACACAGCGGTC
TGGTTGCCAAGGTCCAAAGACCTTAAAAAACCTGGAGCTAGAAAGCAGTAG
ATGGGGGGATTTAGGCTGAGGACGGGAAGGAATGGAGCTCAGAACTCTGACAGGCTACTGCAGCTTCCTGTGGCCTCCAT
GGCTGAGGACTGGCTGGATTGCCCAGCCCTGGGCCCTGGCTGGAAGCGCCGTGAAGTCTTTCGCAAGTCAGGGGCTACCT
GCGGACGCTCAGACACCTATTACCAGAGCCCCACAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCGATACCTGGGC
CCTGCGTGTGATCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTGTTATCCAGCCCCCAAGGCCCATTCCGTGGCTGT
CACCAGCAAGAAGCGAAAGAAGCCTTCCAGACCATCCAAGACTCAGAAACATCAGGTTGGACCCCAGAGTGGTGAGGTCA
GGAAGGAGGCCCCAAAGGATGAGACCAAGGCTGACACTGTCACAGTCCCAGCTTCATTCCCTGCTCCTGGATGCTGTGAG
AACTGTGGCATCAGCTTCTCAGGGGATGGCACCCAAAGACAGCGGCTCAAAACATTGTGCAAGGACTGCCGAGCACAGAG
AATTGCCTTCAACCGGGAACAGAGAATGTTTAAGCGTGTGGGCTGTGGGGAGTGTGCAGCCTGCCAGGTAACAGAAGACT
GTGGGGCCTGCTCCACCTGCCTCCTGCAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGCAAGTGTGAGCGGAGACGC
TGCCTCCGGATTGTGGAAAGGAGCCGAGGGTGTGGAGTATGCCGGGGCTGTCAGACCCAAGAGGACTGTGGCCGTTGCCG
CATCTGCCTTCGCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACGGCACCTTGCTC
ACCGCCTGCGTCGCCGTCATCAGAGATGTCAGCGACGCACTCCCCTGACTGTGGCTCCCCCCACTGGTAAACATGGCCGC
CGCAGGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCGGCATCCCGGTGCCCAACCACTGCCTCCACCTCCACCATCACA
GTCCCCCGAGCCCACAGAGCCGCACCCCAGAGCCCTGACCCCCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAGACG
AGGACGAGCTACAGCCCTACACGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGCAGCCTGCCTACGGCGGATGGAC
TGTGGCCGCTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCA
ATGCCTGCAGTTTGCCATGAAGCGACTGCTGCCCAGTGTCTGGTCAGAGTCTGAGGATGGGGCAGGATCGCCCCCACCTT
ACCGTCGTCGAAAGAGGCCCAGCTCTGCCCAGCGGCACCATCTTGGCCCTACCTTGAAGCCCACCTTGGTTACACGCACA
GCCCGACCAGACCATACCCGGGCTCCATCGAAGCAGGAAGCAGGTGGTGGCTTTGTGCTGCCTCCGCCTGGCACTGACCT
TGTGTTTTTACGGGAGGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGTTGCAGCTTCCACGGAAGCCCTGTTGCAGG
AGGCCCAGTGCTCTGGCCTGAGTTGGGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATACCCAGGACGAGTGG
ACACCAGGCACAGCTGTCCTGACTTCTCCTGTATTGGTGCCTGGCTGCCCTAGCAAGGCAGTAGACCCCAGCCTGCCATC
TGTGAAGCAAGAGCCACCTGACCCTGAGGAGGACAAGGAGGAGAACAAGGATGACTCTGCCTCCAAATTGGCCCCAGAGG
AGGAGGCAGGAGGGGCTGGCACACCCGTGATCACGGAGATTTTCAGCCTGGGTGGAACCCGCTTCCGAGACACAGCGGTC
TGGTTGCCAAGGTCCAAAGACCTTAAAAAACCTGGAGCTAGAAAGCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 30 .42 RPM |
| SRP051959_skeletal_muscle | 20 .83 RPM |
| SRP051959_lymph_node | 33 .88 RPM |
| SRP051959_lung | 27 .20 RPM |
| SRP051959_liver | 13 .00 RPM |
| SRP051959_kidney | 24 .87 RPM |
| SRP051959_heart | 19 .96 RPM |
| SRP051959_colon | 18 .62 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000010534 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011661 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1830 | 70.08 | 68.71 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000004959 retrocopies