Parental gene: | COPS4, ENSCJAG00000005067 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 3:111126942..111177249(-) |
>ENSCJAG00000005067
ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGTTCTCATAAAGATCTGGCGGGCAAGTATCG
TCAGATCCTGGAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCGATGGTTA
ATGAGAATGTCAGTCTTGTGATCTCGAGGCAGTTGCTGACTGATTTTTGCACACATCTCCCTAACCTGCCTGATAGCACA
GCCAAAGAAATCTATCACTTCACCTTGGAAAAGATCCAGCCTAGAGTCATTTCATTTGAGGAGCAGGTTGCTTCCATAAG
ACAGCATCTTGCGTCCATATATGAGAAAGAAGAAGACTGGAGAAATGCAGCCCAAGTGTTGGTGGGAATTCCTTTGGAAA
CAGGACAAAAACAGTACAATGTAGATTATAAACTGGAGACTTACTTGAAGATTGCTAGGCTATATCTGGAGGATGATGAT
CCAGTCCAGGCGGAGGCTTACATAAATCGGGCATCGTTGCTTCAGAATGAATCAACCAATGAACAGTTACAGATACATTA
TAAGGTATGCTATGCACGTGTTCTTGATTATAGAAGAAAATTCATTGAAGCTGCACAAAGGTACAATGAGCTCTCTTACA
AGACAATAGTCCATGAAAGTGAAAGACTAGAGGCCTTAAAACATGCTTTGCACTGTACCATCTTAGCATCAGCAGGACAG
CAGCGTTCTCGGATGCTAGCTACTCTTTTTAAGGATGAAAGGTGCCAGCAACTTGCTGCCTATGGGATCCTAGAGAAAAT
GTACCTGGATAGGATCATCAGAGGAAATCAGCTTCAAGAATTTGCTGCCATGCTGATGCCTCACCAAAAAGCAACTACAG
CTGATGGTTCCAGCATCTTGGACAGAGCTGTTATTGAACACAATTTGTTGTCTGCAAGTAAATTATATAATAATATTACC
TTCGAAGAACTTGGAGCTCTTTTAGAGATTCCTGCGGCTAAGCACGAGAAGCCCTGCCAACATGGGACAAGCAGATCCAA
TCACTTTGTTTCCAAGTGA
ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGTTCTCATAAAGATCTGGCGGGCAAGTATCG
TCAGATCCTGGAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCGATGGTTA
ATGAGAATGTCAGTCTTGTGATCTCGAGGCAGTTGCTGACTGATTTTTGCACACATCTCCCTAACCTGCCTGATAGCACA
GCCAAAGAAATCTATCACTTCACCTTGGAAAAGATCCAGCCTAGAGTCATTTCATTTGAGGAGCAGGTTGCTTCCATAAG
ACAGCATCTTGCGTCCATATATGAGAAAGAAGAAGACTGGAGAAATGCAGCCCAAGTGTTGGTGGGAATTCCTTTGGAAA
CAGGACAAAAACAGTACAATGTAGATTATAAACTGGAGACTTACTTGAAGATTGCTAGGCTATATCTGGAGGATGATGAT
CCAGTCCAGGCGGAGGCTTACATAAATCGGGCATCGTTGCTTCAGAATGAATCAACCAATGAACAGTTACAGATACATTA
TAAGGTATGCTATGCACGTGTTCTTGATTATAGAAGAAAATTCATTGAAGCTGCACAAAGGTACAATGAGCTCTCTTACA
AGACAATAGTCCATGAAAGTGAAAGACTAGAGGCCTTAAAACATGCTTTGCACTGTACCATCTTAGCATCAGCAGGACAG
CAGCGTTCTCGGATGCTAGCTACTCTTTTTAAGGATGAAAGGTGCCAGCAACTTGCTGCCTATGGGATCCTAGAGAAAAT
GTACCTGGATAGGATCATCAGAGGAAATCAGCTTCAAGAATTTGCTGCCATGCTGATGCCTCACCAAAAAGCAACTACAG
CTGATGGTTCCAGCATCTTGGACAGAGCTGTTATTGAACACAATTTGTTGTCTGCAAGTAAATTATATAATAATATTACC
TTCGAAGAACTTGGAGCTCTTTTAGAGATTCCTGCGGCTAAGCACGAGAAGCCCTGCCAACATGGGACAAGCAGATCCAA
TCACTTTGTTTCCAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 14 .60 RPM |
| SRP051959_skeletal_muscle | 21 .12 RPM |
| SRP051959_lymph_node | 14 .36 RPM |
| SRP051959_lung | 12 .17 RPM |
| SRP051959_liver | 11 .81 RPM |
| SRP051959_kidney | 15 .86 RPM |
| SRP051959_heart | 15 .52 RPM |
| SRP051959_colon | 13 .51 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000019311 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000017599 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2148 | 92.04 | 57.10 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2345 | 85.65 | 67.33 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000005067 retrocopies