Parental gene: | PGD, ENSCJAG00000005090 |
| Aliases: | None |
| Description: | 6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:F7G049] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:44983210..45002047(+) |
>ENSCJAG00000005090
ATGGGCCAGAACTTAATTTTGAACATGAATGACCACGGCTTTGTGGTCTGTGCTTTTAATAGGACTGTCTCCAAAGTTGA
TGATTTCTTGGCCAATGAGGCAAAGGGAACCAAAGTGGTGGGTGCTCAGTCCCTGAAGGAGATGGTCTCCAAGCTGAAGA
AGCCCCGGCGGATCATCCTCCTGGTGAAGGCTGGGCAAGCGGTTGATGATTTCATCGAAAAATTGGTACCATTGTTGGAC
ACTGGTGATATCATCATTGACGGAGGAAATTCTGAATATAGGGACACCACAAGACGGTGCCGAGACCTCAAGGCCAAGGG
AATTTTATTTGTGGGGAGTGGAGTCAGTGGCGGAGAGGAAGGAGCCCGGTATGGTCCATCACTCATGCCAGGAGGGAACA
AAGAAGCATGGCCCCACATCAAGACCATCTTCCAAGGCATCGCTGCAAAAGTAGGAACTGGAGAACCCTGCTGTGACTGG
GTGGGAGAAGAGGGAGCAGGCCACTTTGTGAAGATGGTGCACAACGGGATAGAGTATGGGGACATGCAGCTGATCTGCGA
GGCGTACCACCTGATGAAAGACGTGCTAGGCATGGCGCAGGACGAGATGGCGCAGGCCTTTGAAGATTGGAACAAGACAG
AGCTAGACTCATTCCTGATTGAAATCACAGCCAATATTCTCAAGTTCCAAGATGCCGATGGCAAACATCTGCTGCCAAAG
ATTAGGGACAGTGCGGGGCAGAAGGGCACGGGGAAGTGGACTGCCATCTCTGCCCTGGAGTACGGCGTACCCGTCACCCT
CATTGGAGAAGCTGTCTTTGCTCGGTGCTTATCATCTCTGAAGGATGAGAGAATTCAAGCTAGCAAAAAGCTGAAGGGTC
CACAAAAGTTCCAGTTTGATGGTGATAAGAAATCATTTCTGGAGGACATTCGGAAGGCCCTCTACGCTTCCAAGATCATA
TCTTATGCTCAAGGCTTTATGCTGCTAAGGCAGGCAGCCACCGAATTTGGCTGGACCCTCAATTATGGTGGCATCGCCCT
GATGTGGAGAGGGGGCTGCATCATCAGAAGTGTATTCCTAGGAAAGATAAAGGATGCATTTGATCGAAACCCAGAACTCC
AGAACCTCCTACTGGACGACTTCTTTAAGTCAGCTGTTGAAAACTGCCAGGACTCCTGGAGGCGGGCAGTCAGCACTGGG
GTCCAGGCTGGCATTCCCATGCCCTGTTTTACCACTGCCCTCTCCTTCTATGACGGGTACAGACATGAGATGCTGCCAGC
CAACCTCATCCAGGCTCAGCGGGATTACTTCGGGGCCCACACCTATGAACTCTTGGCCAAACCAGGGCAGTTTATCCACA
CCAATTGGACAGGCCACGGTGGCAGTGTGTCATCCTCGTCATACAATGCCTAA
ATGGGCCAGAACTTAATTTTGAACATGAATGACCACGGCTTTGTGGTCTGTGCTTTTAATAGGACTGTCTCCAAAGTTGA
TGATTTCTTGGCCAATGAGGCAAAGGGAACCAAAGTGGTGGGTGCTCAGTCCCTGAAGGAGATGGTCTCCAAGCTGAAGA
AGCCCCGGCGGATCATCCTCCTGGTGAAGGCTGGGCAAGCGGTTGATGATTTCATCGAAAAATTGGTACCATTGTTGGAC
ACTGGTGATATCATCATTGACGGAGGAAATTCTGAATATAGGGACACCACAAGACGGTGCCGAGACCTCAAGGCCAAGGG
AATTTTATTTGTGGGGAGTGGAGTCAGTGGCGGAGAGGAAGGAGCCCGGTATGGTCCATCACTCATGCCAGGAGGGAACA
AAGAAGCATGGCCCCACATCAAGACCATCTTCCAAGGCATCGCTGCAAAAGTAGGAACTGGAGAACCCTGCTGTGACTGG
GTGGGAGAAGAGGGAGCAGGCCACTTTGTGAAGATGGTGCACAACGGGATAGAGTATGGGGACATGCAGCTGATCTGCGA
GGCGTACCACCTGATGAAAGACGTGCTAGGCATGGCGCAGGACGAGATGGCGCAGGCCTTTGAAGATTGGAACAAGACAG
AGCTAGACTCATTCCTGATTGAAATCACAGCCAATATTCTCAAGTTCCAAGATGCCGATGGCAAACATCTGCTGCCAAAG
ATTAGGGACAGTGCGGGGCAGAAGGGCACGGGGAAGTGGACTGCCATCTCTGCCCTGGAGTACGGCGTACCCGTCACCCT
CATTGGAGAAGCTGTCTTTGCTCGGTGCTTATCATCTCTGAAGGATGAGAGAATTCAAGCTAGCAAAAAGCTGAAGGGTC
CACAAAAGTTCCAGTTTGATGGTGATAAGAAATCATTTCTGGAGGACATTCGGAAGGCCCTCTACGCTTCCAAGATCATA
TCTTATGCTCAAGGCTTTATGCTGCTAAGGCAGGCAGCCACCGAATTTGGCTGGACCCTCAATTATGGTGGCATCGCCCT
GATGTGGAGAGGGGGCTGCATCATCAGAAGTGTATTCCTAGGAAAGATAAAGGATGCATTTGATCGAAACCCAGAACTCC
AGAACCTCCTACTGGACGACTTCTTTAAGTCAGCTGTTGAAAACTGCCAGGACTCCTGGAGGCGGGCAGTCAGCACTGGG
GTCCAGGCTGGCATTCCCATGCCCTGTTTTACCACTGCCCTCTCCTTCTATGACGGGTACAGACATGAGATGCTGCCAGC
CAACCTCATCCAGGCTCAGCGGGATTACTTCGGGGCCCACACCTATGAACTCTTGGCCAAACCAGGGCAGTTTATCCACA
CCAATTGGACAGGCCACGGTGGCAGTGTGTCATCCTCGTCATACAATGCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 37 .58 RPM |
| SRP051959_skeletal_muscle | 7 .84 RPM |
| SRP051959_lymph_node | 20 .11 RPM |
| SRP051959_lung | 36 .57 RPM |
| SRP051959_liver | 31 .60 RPM |
| SRP051959_kidney | 30 .24 RPM |
| SRP051959_heart | 15 .49 RPM |
| SRP051959_colon | 74 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000142657 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000004754 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000023029 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011164 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1405 | 93.66 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2892 | 87.60 | 78.72 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000005090 retrocopies