Parental gene: | MRPL2, ENSCJAG00000005116 |
| Aliases: | None |
| Description: | mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:14056] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 4:44368315..44373637(-) |
>ENSCJAG00000005116
ATGGCCCTGTGGGCACTGACCCGCGCTCTGCGCTCTCTGAGCCTGGCACCCCCGACCGTCGCCGCCCCTGTCCCAAGTCT
GTTCCCCGCCGCCCAGATGATGGACAGTGCCCTCCTCCAACAGCCCTCTGTCTTGATGTTGCTCCCCTGCTGCCCAGTCC
TTACTTCTGCGGCCCTTAATGCCAACTTTGTGTCCTGGAAGAGTCGTACCAAGTACACCATTACACCAGTGAAGATGAGG
AAGTCTGGGGGCCGAGACCACACAGGCCGCATCCGGGTGCATGGTATTGGCGGGGGCCACAGGCAACGTTATCGAATGAT
TGACTTTCTGCGTTTCCGGCCTAAGGAGACCAACTCAGGACCTTTTGAGGAGAAGGTTATCCAAGTCCGCTATGATCCCT
GTAGGTCAGCAGACATAGCTCTGGTTGCTGGGGGCAGCCGGAAACGCTGGATCATTGCAACAGAAAACATGCAGGCTGGA
GATAGAATCTTGAACTCTAACCACATAGGCCGCATGGCAGTTGCTGCTCGGGAAGGGGATGCGCATCCTCTTGGGGCTTT
GCCTGTGGGGACCCTCATCAACAATGTGGAAAGTGAGCCAGGCCGGGGTGCCCAGTATATCCGGGCTGCAGGGACGTGTG
GTGTGCTACTGCGGAAGGTGAATGGCACAGCCATTATTCAGCTGCCCTCTAAGAGGCAGATGCAGGTGCTGGAAACGTGC
ATAGCAACAGTAGGTCGAGTATCCAACGTTGATCATAACAAACGGGTTATTGGCAAGGCAGGGCGCAACCGTTGGCTGGG
CAAGAGGCCTAACAGTGGGCGATGGCACCGCAAGGGGGGCTGGGCTGGCCGAAAGATTCGGCCACTACCCCCCATGAAGA
GTTATGTGAAGCTGCCTTCTGCTGCTGCCCAAAGCTGA
ATGGCCCTGTGGGCACTGACCCGCGCTCTGCGCTCTCTGAGCCTGGCACCCCCGACCGTCGCCGCCCCTGTCCCAAGTCT
GTTCCCCGCCGCCCAGATGATGGACAGTGCCCTCCTCCAACAGCCCTCTGTCTTGATGTTGCTCCCCTGCTGCCCAGTCC
TTACTTCTGCGGCCCTTAATGCCAACTTTGTGTCCTGGAAGAGTCGTACCAAGTACACCATTACACCAGTGAAGATGAGG
AAGTCTGGGGGCCGAGACCACACAGGCCGCATCCGGGTGCATGGTATTGGCGGGGGCCACAGGCAACGTTATCGAATGAT
TGACTTTCTGCGTTTCCGGCCTAAGGAGACCAACTCAGGACCTTTTGAGGAGAAGGTTATCCAAGTCCGCTATGATCCCT
GTAGGTCAGCAGACATAGCTCTGGTTGCTGGGGGCAGCCGGAAACGCTGGATCATTGCAACAGAAAACATGCAGGCTGGA
GATAGAATCTTGAACTCTAACCACATAGGCCGCATGGCAGTTGCTGCTCGGGAAGGGGATGCGCATCCTCTTGGGGCTTT
GCCTGTGGGGACCCTCATCAACAATGTGGAAAGTGAGCCAGGCCGGGGTGCCCAGTATATCCGGGCTGCAGGGACGTGTG
GTGTGCTACTGCGGAAGGTGAATGGCACAGCCATTATTCAGCTGCCCTCTAAGAGGCAGATGCAGGTGCTGGAAACGTGC
ATAGCAACAGTAGGTCGAGTATCCAACGTTGATCATAACAAACGGGTTATTGGCAAGGCAGGGCGCAACCGTTGGCTGGG
CAAGAGGCCTAACAGTGGGCGATGGCACCGCAAGGGGGGCTGGGCTGGCCGAAAGATTCGGCCACTACCCCCCATGAAGA
GTTATGTGAAGCTGCCTTCTGCTGCTGCCCAAAGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 4 .24 RPM |
| SRP051959_skeletal_muscle | 8 .60 RPM |
| SRP051959_lymph_node | 3 .93 RPM |
| SRP051959_lung | 4 .21 RPM |
| SRP051959_liver | 8 .75 RPM |
| SRP051959_kidney | 8 .03 RPM |
| SRP051959_heart | 4 .56 RPM |
| SRP051959_colon | 2 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000005134 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000112651 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010552 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000002450 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004370 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000034421 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000016630 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000018186 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000018057 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3318 | 79.62 | 51.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000005116 retrocopies