Parental gene: | KDM1A, ENSCJAG00000005607 |
| Aliases: | None |
| Description: | lysine (K)-specific demethylase 1A [Source:HGNC Symbol;Acc:29079] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:57015777..57080377(+) |
>ENSCJAG00000005607
ATGTTGTCTGGGAAGAAGGCTGCAGCCGCAGCGGCGGCGGCTGCAGCGGCGGCAGCCGGGACGGAGGCTGGCCCCGGGAC
TGCGGGCAGTGCCGAGAACGGCTCTGAGGTGGCCGCGCCGCCCGCGGGCCTGTCGGGCCCAGCCGAGGTCGGGCCGGGGG
CGGCCGGGGAGCGCACGCCCCGCAAGAAAGAGCCTCCGCGGGCCTCGCCCCCCGGGGGCCTGGCCGAACCGCCGGGGTCC
GCAGGGCCTCAGGCCGGGCCTACCGTCGTGCCTGGGTCTGCGACCCCCATGGAAACTGGAATAGCAGAGACTCCGGAGGG
GCGTCGGACTAGCAGGCGCAAGCGGGCGAAGGTAGAGTACAGAGAGATGGATGAAAGCTTGGCCAACCTCTCAGAAGATG
AGTATTATTCAGAAGAAGAGAGAAATGCTAAAGCAGAGAAGGAAAAGAAGCTTCCCCCACCACCTCCTCAAGCCCCCCCT
GAGGAAGAAAACGAAAGTGAGCCTGAAGAACCATCGGGGCAAGCAGGAGGACTTCAAGACGACAGTTCTGGAGGGTATGG
AGACGGCCAAGCATCAGGTGTGGAGGGAGCAGCTTTCCAGAGCCGACTTCCTCATGACCGGATGACTTCTCAGGAAGCAG
CCTGTTTTCCAGATATTATCAGTGGACCACAGCAGACCCAGAAAGTTTTTCTGTTCATTAGAAACCGCACGTTGCAGTTG
TGGTTGGATAATCCAAAGATTCAACTGACATTTGAGGCTACTCTCCAACAATTAGAAGCACCTTATAACAGTGATACTGT
ACTTGTCCACCGAGTTCACAGTTATTTGGAGCGTCATGGTCTTATCAACTTTGGCATCTATAAAAGGATAAAACCCCTAC
CAACTAAAAAGACAGGAAAGGTAATTATTATAGGCTCTGGGGTCTCAGGCTTGGCAGCAGCTCGACAATTACAAAGTTTT
GGAATGGATGTCACACTTTTGGAAGCCAGGGATCGTGTGGGTGGACGAGTTGCTACGTTTCGCAAAGGAAACTATGTAGC
TGATCTTGGAGCCATGGTGGTCACAGGTCTTGGAGGGAATCCTATGGCTGTTGTCAGCAAACAAGTAAATATGGAACTGG
CCAAGATCAAGCAAAAATGCCCACTTTATGAAGCAAACGGACAAGCTGTAAATTTTCAGGTTCCTAAAGAGAAAGATGAA
ATGGTAGAGCAAGAGTTTAACCGGTTGCTAGAAGCTACATCTTACCTTAGTCATCAGCTAGACTTCAATGTCCTCAATAA
TAAGCCTGTGTCCCTTGGCCAGGCATTGGAAGTTGTCATTCAGTTGCAAGAAAAGCATGTCAAAGATGAACAGATTGAAC
ATTGGAAGAAGATAGTGAAAACTCAGGAAGAATTGAAAGAACTTCTTAATAAGATGGTAAATTTGAAAGAGAAAATTAAA
GAACTCCATCAGCAATACAAAGAAGCATCTGAAGTAAAGCCACCCAGAGACATTACTGCCGAGTTCTTAGTGAAAAGCAA
ACACAGGGATCTGACCGCCCTATGCAAGGAATATGATGAATTAGCTGAAACACAAGGAAAGCTAGAAGAAAAACTTCAGG
AACTGGAAGCGAATCCTCCGAGTGATGTATATCTCTCCTCAAGAGACAGACAAATACTTGATTGGCATTTTGCAAATCTT
GAATTTGCTAATGCCACACCTCTCTCAACTCTCTCCCTTAAACACTGGGATCAGGATGATGACTTTGAGTTCACTGGCAG
CCACCTGACGGTGAGGAATGGCTACTCATGTGTGCCTGTGGCTTTAGCAGAAGGCCTAGACATTAAACTGAATACAGCAG
TGCGACAGGTTCGCTACACGGCTTCAGGATGTGAAGTGATAGCTGTGAATACCCGCTCCACGAGTCAAACCTTTATTTAT
AAATGCGATGCAGTTCTCTGTACCCTTCCCCTGGGTGTGCTGAAGCAGCAGCCACCAGCTGTTCAGTTTGTGCCACCTCT
TCCTGAGTGGAAAACATCTGCAGTCCAAAGGATGGGATTTGGCAACCTTAACAAGGTGGTGTTGTGCTTTGACCGGGTGT
TCTGGGATCCAAGTGTCAATTTGTTTGGGCATGTTGGCAGTACGACTGCCAGCAGGGGTGAGCTCTTCCTCTTCTGGAAT
CTCTATAAAGCTCCAATACTGTTGGCACTAGTGGCAGGAGAAGCTGCTGGTATCATGGAAAATATAAGTGATGATGTGAT
TGTTGGCCGATGCCTGGCCATTCTTAAAGGGATTTTTGGAAGCAGTGCAGTACCGCAGCCCAAAGAAACTGTGGTGTCTC
GTTGGCGTGCTGATCCTTGGGCCCGGGGCTCTTATTCCTATGTTGCTGCAGGATCATCTGGAAATGACTATGATTTAATG
GCTCAGCCAATCACTCCTGGCCCCTCAATTCCAGGCGCCCCACAGCCGATTCCACGACTCTTCTTTGCGGGAGAACATAC
GATCCGTAACTACCCAGCCACAGTGCATGGTGCTCTGCTGAGTGGGCTGCGAGAAGCAGGAAGAATTGCAGACCAGTTTT
TGGGGGCCATGTATACACTGCCTCGCCAGGCCACACCAGGTGTTCCTGCACAGCAGTCCCCAAGCATGTGA
ATGTTGTCTGGGAAGAAGGCTGCAGCCGCAGCGGCGGCGGCTGCAGCGGCGGCAGCCGGGACGGAGGCTGGCCCCGGGAC
TGCGGGCAGTGCCGAGAACGGCTCTGAGGTGGCCGCGCCGCCCGCGGGCCTGTCGGGCCCAGCCGAGGTCGGGCCGGGGG
CGGCCGGGGAGCGCACGCCCCGCAAGAAAGAGCCTCCGCGGGCCTCGCCCCCCGGGGGCCTGGCCGAACCGCCGGGGTCC
GCAGGGCCTCAGGCCGGGCCTACCGTCGTGCCTGGGTCTGCGACCCCCATGGAAACTGGAATAGCAGAGACTCCGGAGGG
GCGTCGGACTAGCAGGCGCAAGCGGGCGAAGGTAGAGTACAGAGAGATGGATGAAAGCTTGGCCAACCTCTCAGAAGATG
AGTATTATTCAGAAGAAGAGAGAAATGCTAAAGCAGAGAAGGAAAAGAAGCTTCCCCCACCACCTCCTCAAGCCCCCCCT
GAGGAAGAAAACGAAAGTGAGCCTGAAGAACCATCGGGGCAAGCAGGAGGACTTCAAGACGACAGTTCTGGAGGGTATGG
AGACGGCCAAGCATCAGGTGTGGAGGGAGCAGCTTTCCAGAGCCGACTTCCTCATGACCGGATGACTTCTCAGGAAGCAG
CCTGTTTTCCAGATATTATCAGTGGACCACAGCAGACCCAGAAAGTTTTTCTGTTCATTAGAAACCGCACGTTGCAGTTG
TGGTTGGATAATCCAAAGATTCAACTGACATTTGAGGCTACTCTCCAACAATTAGAAGCACCTTATAACAGTGATACTGT
ACTTGTCCACCGAGTTCACAGTTATTTGGAGCGTCATGGTCTTATCAACTTTGGCATCTATAAAAGGATAAAACCCCTAC
CAACTAAAAAGACAGGAAAGGTAATTATTATAGGCTCTGGGGTCTCAGGCTTGGCAGCAGCTCGACAATTACAAAGTTTT
GGAATGGATGTCACACTTTTGGAAGCCAGGGATCGTGTGGGTGGACGAGTTGCTACGTTTCGCAAAGGAAACTATGTAGC
TGATCTTGGAGCCATGGTGGTCACAGGTCTTGGAGGGAATCCTATGGCTGTTGTCAGCAAACAAGTAAATATGGAACTGG
CCAAGATCAAGCAAAAATGCCCACTTTATGAAGCAAACGGACAAGCTGTAAATTTTCAGGTTCCTAAAGAGAAAGATGAA
ATGGTAGAGCAAGAGTTTAACCGGTTGCTAGAAGCTACATCTTACCTTAGTCATCAGCTAGACTTCAATGTCCTCAATAA
TAAGCCTGTGTCCCTTGGCCAGGCATTGGAAGTTGTCATTCAGTTGCAAGAAAAGCATGTCAAAGATGAACAGATTGAAC
ATTGGAAGAAGATAGTGAAAACTCAGGAAGAATTGAAAGAACTTCTTAATAAGATGGTAAATTTGAAAGAGAAAATTAAA
GAACTCCATCAGCAATACAAAGAAGCATCTGAAGTAAAGCCACCCAGAGACATTACTGCCGAGTTCTTAGTGAAAAGCAA
ACACAGGGATCTGACCGCCCTATGCAAGGAATATGATGAATTAGCTGAAACACAAGGAAAGCTAGAAGAAAAACTTCAGG
AACTGGAAGCGAATCCTCCGAGTGATGTATATCTCTCCTCAAGAGACAGACAAATACTTGATTGGCATTTTGCAAATCTT
GAATTTGCTAATGCCACACCTCTCTCAACTCTCTCCCTTAAACACTGGGATCAGGATGATGACTTTGAGTTCACTGGCAG
CCACCTGACGGTGAGGAATGGCTACTCATGTGTGCCTGTGGCTTTAGCAGAAGGCCTAGACATTAAACTGAATACAGCAG
TGCGACAGGTTCGCTACACGGCTTCAGGATGTGAAGTGATAGCTGTGAATACCCGCTCCACGAGTCAAACCTTTATTTAT
AAATGCGATGCAGTTCTCTGTACCCTTCCCCTGGGTGTGCTGAAGCAGCAGCCACCAGCTGTTCAGTTTGTGCCACCTCT
TCCTGAGTGGAAAACATCTGCAGTCCAAAGGATGGGATTTGGCAACCTTAACAAGGTGGTGTTGTGCTTTGACCGGGTGT
TCTGGGATCCAAGTGTCAATTTGTTTGGGCATGTTGGCAGTACGACTGCCAGCAGGGGTGAGCTCTTCCTCTTCTGGAAT
CTCTATAAAGCTCCAATACTGTTGGCACTAGTGGCAGGAGAAGCTGCTGGTATCATGGAAAATATAAGTGATGATGTGAT
TGTTGGCCGATGCCTGGCCATTCTTAAAGGGATTTTTGGAAGCAGTGCAGTACCGCAGCCCAAAGAAACTGTGGTGTCTC
GTTGGCGTGCTGATCCTTGGGCCCGGGGCTCTTATTCCTATGTTGCTGCAGGATCATCTGGAAATGACTATGATTTAATG
GCTCAGCCAATCACTCCTGGCCCCTCAATTCCAGGCGCCCCACAGCCGATTCCACGACTCTTCTTTGCGGGAGAACATAC
GATCCGTAACTACCCAGCCACAGTGCATGGTGCTCTGCTGAGTGGGCTGCGAGAAGCAGGAAGAATTGCAGACCAGTTTT
TGGGGGCCATGTATACACTGCCTCGCCAGGCCACACCAGGTGTTCCTGCACAGCAGTCCCCAAGCATGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 24 .92 RPM |
| SRP051959_skeletal_muscle | 19 .68 RPM |
| SRP051959_lymph_node | 20 .04 RPM |
| SRP051959_lung | 24 .74 RPM |
| SRP051959_liver | 16 .27 RPM |
| SRP051959_kidney | 29 .06 RPM |
| SRP051959_heart | 23 .63 RPM |
| SRP051959_colon | 19 .84 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_517 | 93.14 | 98.94 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000005607 retrocopies