Parental gene: | UFSP2, ENSCJAG00000005943 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 3:4012864..4060092(+) |
>ENSCJAG00000005943
ATGGATATACTCTTCAGAATAAGAGGAGGCCTTGATTTGGCTTTTCAGCTAGCTACTCCTAATGAAATTTTTCTCAAGAA
GGCACTGAAACATATGTTGAGTGACCTGTCAACCAAGCTTTCTTCAAACGCTCTCGTGTTCAGAATTTGCCACAGTTCAG
TGTATATATGGCCTAGCAGTGACGTCAACACCGTTCCGGGAGAGCTGACTGACGTTTCTGCTTGTAGGAGCATACTGCGC
TTTATTCCATTTGAGCCAGAAGAAGATACAAAACGAAAATTCATGAGAAGGAAAGACAAAAAGTTATCAGACATGCATCA
AATAGTAAATATAGATCTTATGCTGGAAATGTCAACCTCCCTGGCAGCTGTAACACCCATCATTGAAAGGGAAAGTGGAG
GACACCATTACGTTAATATGACTTTACCTGTCGATGCAGTTGTGTCTGTTGCTCCGGAGGAAACGTGGGGAAAAGTTCGT
AAACTTCTAGTTGATGCAATTCATAATCAACTAACTGACATGGAAAAATGCATTTTGAAATATATGAAAGGAACATCTAT
TGTGGTCCCTGAACCACTGCACTTTTTATTACCAGGGAAAAAAAGTCTTGTAACAATATCATATCCTTCAGGAATACCAG
ATGGTCAGCTGCAGGCCTACAGAAAGGAGTTACATGATCTCTTCAATCTGCCTCATGACAGACCCTATTTCAAAAGGTCT
AATGCTTATCACTTTCCTGATGAGCCATACAAAGACGGTTACATTAGAAATCCACATGCTTATCTTAACCCACCCAACAT
GGAGACTGGCATGGTTTGTGTGGCCCAGGGCATATACAGTTATCATCATTATATGCAGGATCGGATAGATGACAGTGGCT
GGGGCTGTGCTTATCGATCTCTGCAGACCATCTGCTCTTGGTTCAAACATCAGGGATACACAGAGAGGTCCATTCCAACA
CACAGAGAAATTCAGCAGCACACGAAGGCTCTAGTCGATGCCGGCGACAAACCAGCAACATTTGTCGGATCACGGCAATG
GATTGGATCTATTGAGGTACAGCTGGTCCTAAACCAATTGATTGGCATCACTTCAAAAATCCTGTTTGTCAGCCAAGGTT
CAGAAATGGCCTCTCAAGGACGGGCACTGGCTAATCATTTCCAAAGCGAAGGAACTCCAGTTATGATTGGGGGAGGAGTT
TTGGCTCACACAATACTAGGAGTTGCATGGAATGAGATTACAGGGCAGATAAAGTTTCTGATTCTAGATCCACATTATAC
AGGCGCTGAAGACCTGCAAGTTATTTTGGAAAAGGGCTGGTGTGGATGGAAGGGCCCAGACTTTTGGAACAAGGATGCAT
ACTATAACTTATGTCTTCCTCAGCGACCAAAGATGATTTAA
ATGGATATACTCTTCAGAATAAGAGGAGGCCTTGATTTGGCTTTTCAGCTAGCTACTCCTAATGAAATTTTTCTCAAGAA
GGCACTGAAACATATGTTGAGTGACCTGTCAACCAAGCTTTCTTCAAACGCTCTCGTGTTCAGAATTTGCCACAGTTCAG
TGTATATATGGCCTAGCAGTGACGTCAACACCGTTCCGGGAGAGCTGACTGACGTTTCTGCTTGTAGGAGCATACTGCGC
TTTATTCCATTTGAGCCAGAAGAAGATACAAAACGAAAATTCATGAGAAGGAAAGACAAAAAGTTATCAGACATGCATCA
AATAGTAAATATAGATCTTATGCTGGAAATGTCAACCTCCCTGGCAGCTGTAACACCCATCATTGAAAGGGAAAGTGGAG
GACACCATTACGTTAATATGACTTTACCTGTCGATGCAGTTGTGTCTGTTGCTCCGGAGGAAACGTGGGGAAAAGTTCGT
AAACTTCTAGTTGATGCAATTCATAATCAACTAACTGACATGGAAAAATGCATTTTGAAATATATGAAAGGAACATCTAT
TGTGGTCCCTGAACCACTGCACTTTTTATTACCAGGGAAAAAAAGTCTTGTAACAATATCATATCCTTCAGGAATACCAG
ATGGTCAGCTGCAGGCCTACAGAAAGGAGTTACATGATCTCTTCAATCTGCCTCATGACAGACCCTATTTCAAAAGGTCT
AATGCTTATCACTTTCCTGATGAGCCATACAAAGACGGTTACATTAGAAATCCACATGCTTATCTTAACCCACCCAACAT
GGAGACTGGCATGGTTTGTGTGGCCCAGGGCATATACAGTTATCATCATTATATGCAGGATCGGATAGATGACAGTGGCT
GGGGCTGTGCTTATCGATCTCTGCAGACCATCTGCTCTTGGTTCAAACATCAGGGATACACAGAGAGGTCCATTCCAACA
CACAGAGAAATTCAGCAGCACACGAAGGCTCTAGTCGATGCCGGCGACAAACCAGCAACATTTGTCGGATCACGGCAATG
GATTGGATCTATTGAGGTACAGCTGGTCCTAAACCAATTGATTGGCATCACTTCAAAAATCCTGTTTGTCAGCCAAGGTT
CAGAAATGGCCTCTCAAGGACGGGCACTGGCTAATCATTTCCAAAGCGAAGGAACTCCAGTTATGATTGGGGGAGGAGTT
TTGGCTCACACAATACTAGGAGTTGCATGGAATGAGATTACAGGGCAGATAAAGTTTCTGATTCTAGATCCACATTATAC
AGGCGCTGAAGACCTGCAAGTTATTTTGGAAAAGGGCTGGTGTGGATGGAAGGGCCCAGACTTTTGGAACAAGGATGCAT
ACTATAACTTATGTCTTCCTCAGCGACCAAAGATGATTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 11 .95 RPM |
| SRP051959_skeletal_muscle | 9 .76 RPM |
| SRP051959_lymph_node | 10 .80 RPM |
| SRP051959_lung | 11 .88 RPM |
| SRP051959_liver | 12 .63 RPM |
| SRP051959_kidney | 14 .95 RPM |
| SRP051959_heart | 11 .03 RPM |
| SRP051959_colon | 11 .89 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000004727 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014660 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3122 | 81.04 | 57.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000005943 retrocopies