Parental gene: | EMC2, ENSCJAG00000006437 |
| Aliases: | None |
| Description: | ER membrane protein complex subunit 2 [Source:HGNC Symbol;Acc:28963] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 16:86069362..86134731(-) |
>ENSCJAG00000006437
ATGGCGAAGGTCTCAGAGCTTTACGATGTCACTTGGGAAGAAATGCGAGATAAAATGAGAAAATGGAGAGAAGAAAACTC
ACGAAATAGTGAGCAAATTGTGGAAGTTGGAGAAGAATTAATTAATGAATATGCTTCTAAGCTTGGAGATGATATTTGGA
TCATATATGAACAGGTGATGATTGCTGCACTAGACTATGGTCGGGATGACTTGGCCTTGTTTTGTCTTCAAGAGCTAAGA
AGACAGTTTCCTGGCAGTCACAGAGTCAAGCGATTAACAGGCATGAGATTTGAAGCCATGGAAAGATATGATGATGCTAT
ACAGCTATATGATAGGATTTTACAAGAAGATCCAACTAACACTGCTGCAAGAAAGCGTAAGATTGCCATTCGAAAAGCCC
AGGGGAAAAATGTGGAGGCCATTCGGGAACTGAATGAGTATCTGGAACAATTTGTTGGAGACCAAGAAGCCTGGCATGAA
CTTGCAGAACTTTATATCAATGAACATGACTATGCAAAAGCAGCCTTTTGTTTAGAGGAACTAATGATGACTAATCCACA
CAACCACTTATACTGTCAGCAGTATGCTGAAGTTAAATATACCCAAGGTGGACTTGAAAACCTCGAACTTTCAAGAAAGT
ATTTTGCACAGGCATTGAAACTGAACAACAGAAATATGAGAGCTTTGTTTGGGCTTTATATGTCGGCAAGTCATATTGCT
TCTAATCCAAAAGCAAGTGCAAAAACGAAAAAGGACAACATGAAATATGCTAGTTGGGCAGCTAGTCAAATAAACAGAGC
TTATCAGTTTGCAGGTCGAAGTAAGAAGGAAACCAAATATTCTCTTAAGGCAGTCGAAGACATGTTGGAAACATTACAGA
TCACCCAGTCTTAA
ATGGCGAAGGTCTCAGAGCTTTACGATGTCACTTGGGAAGAAATGCGAGATAAAATGAGAAAATGGAGAGAAGAAAACTC
ACGAAATAGTGAGCAAATTGTGGAAGTTGGAGAAGAATTAATTAATGAATATGCTTCTAAGCTTGGAGATGATATTTGGA
TCATATATGAACAGGTGATGATTGCTGCACTAGACTATGGTCGGGATGACTTGGCCTTGTTTTGTCTTCAAGAGCTAAGA
AGACAGTTTCCTGGCAGTCACAGAGTCAAGCGATTAACAGGCATGAGATTTGAAGCCATGGAAAGATATGATGATGCTAT
ACAGCTATATGATAGGATTTTACAAGAAGATCCAACTAACACTGCTGCAAGAAAGCGTAAGATTGCCATTCGAAAAGCCC
AGGGGAAAAATGTGGAGGCCATTCGGGAACTGAATGAGTATCTGGAACAATTTGTTGGAGACCAAGAAGCCTGGCATGAA
CTTGCAGAACTTTATATCAATGAACATGACTATGCAAAAGCAGCCTTTTGTTTAGAGGAACTAATGATGACTAATCCACA
CAACCACTTATACTGTCAGCAGTATGCTGAAGTTAAATATACCCAAGGTGGACTTGAAAACCTCGAACTTTCAAGAAAGT
ATTTTGCACAGGCATTGAAACTGAACAACAGAAATATGAGAGCTTTGTTTGGGCTTTATATGTCGGCAAGTCATATTGCT
TCTAATCCAAAAGCAAGTGCAAAAACGAAAAAGGACAACATGAAATATGCTAGTTGGGCAGCTAGTCAAATAAACAGAGC
TTATCAGTTTGCAGGTCGAAGTAAGAAGGAAACCAAATATTCTCTTAAGGCAGTCGAAGACATGTTGGAAACATTACAGA
TCACCCAGTCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 21 .22 RPM |
| SRP051959_skeletal_muscle | 20 .46 RPM |
| SRP051959_lymph_node | 16 .37 RPM |
| SRP051959_lung | 23 .03 RPM |
| SRP051959_liver | 19 .02 RPM |
| SRP051959_kidney | 23 .30 RPM |
| SRP051959_heart | 22 .10 RPM |
| SRP051959_colon | 13 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012826 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000000713 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000011271 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000013258 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000005915 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000022337 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000002461 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018820 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3295 | 82.99 | 95.62 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3867 | 90.24 | 68.69 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000006437 retrocopies