Parental gene: | ATP6V1C2, ENSCJAG00000006660 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 14:97775275..97839112(-) |
>ENSCJAG00000006660
ATGTCGGAGTTTTGGTTAATTTCTGCCCCTGGCGATAGGGAAAATTTGCAAGCTCTGGAGAGGATGAATACTGTAACCTC
CAAGTCCCACCTGTCTTATAACACCAAATTCGCTATTCCTGACTTCAAGGTGGGGACCTTGGATTCCCTGGTTGGCCTCT
CTGATGAGTTGGGGAAACTCGACACCTTTGCTGAAAGCCTCATAAGGAGAATGGCTCAGAGTGTGGTGGAAGTCATGGAG
GACTCGAAGGGGAAGGCACAGGAACACCTCCTGGCAAACGGAGTTGACTTAACCACCTTTGTGACCCACTTTGAATGGGA
CATGGCCAAATATCCTGCCAAGCAGCCACTCGTGAGCGTGGTGGACACCATAGCCAAGCAACTGGCGCAGATCGAGACGG
ACCTGAAGTCTCGAACAGCAGCCTACAACACTCTGAAGACAAACCTGGAGAACCTGGAGAAGAAATCCATGGGGAACCTC
TTCACCCGGACACTGAGCGATATTGTGAACAAAGAGGACTTCGTGCTGGATTCTGAGTATCTCGTCACGCTTCTGGTCAT
TGTCCCCAAACCAAACTACTCACAATGGCAAAAAACCTACGAATCTCTCTCAGACATGGTGGTCCCTCGATCGACCAAAC
TCATTACTGAGGACAAGGAGGGCGGCCTTTTCACTGTGACTCTGTTTCGAAAAGTGATTGAAGATTTCAAAAGCAAAGCC
AGAGAAAACAAGTTCACTGTTCGTGAATTTTACTATGATGAGAAAGAAATTAAAAGGGAAAGGGAGGAGATGGCCCGATT
GCTGTCTGATAAGAAGCAACAGTATCAAACTTCCTGTGTTGCTCTTAAAAAGGGATCATCCACCTTCCCGGACCACAAGG
TTAAGGTAACCCCGCTAGGTAACCCCGATAGGCCCGCTGCGGGGCAGAGCGACAGAGAGAGAGAGAGTGAGGGCGAGGGT
GAGGGCCCCCTGCTGCGCTGGCTCAAGGTGAACTTCAGCGAAGCCTTCATTGCCTGGATCCACATCAAGGCCCTGAGAGT
GTTCGTGGAGTCCGTGCTCAGGTATGGGCTACCAGTGAACTTCCAGGCAGTGCTCCTGCAGCCACAAAAGAAGTCATCCG
CCAAACGTTTACGGGAGGTTCTAAACTCTGTCTTCCGACACCTGGATGAAGTAGCTGCTACAAGTATACTGGATGCATCT
GTGGAGATCCCGGGACTGCAACTCAGTAATCAAGACTATTTTCCTTATGTCTACTTCCATATCGACCTTAGTCTTCTTGA
CTAG
ATGTCGGAGTTTTGGTTAATTTCTGCCCCTGGCGATAGGGAAAATTTGCAAGCTCTGGAGAGGATGAATACTGTAACCTC
CAAGTCCCACCTGTCTTATAACACCAAATTCGCTATTCCTGACTTCAAGGTGGGGACCTTGGATTCCCTGGTTGGCCTCT
CTGATGAGTTGGGGAAACTCGACACCTTTGCTGAAAGCCTCATAAGGAGAATGGCTCAGAGTGTGGTGGAAGTCATGGAG
GACTCGAAGGGGAAGGCACAGGAACACCTCCTGGCAAACGGAGTTGACTTAACCACCTTTGTGACCCACTTTGAATGGGA
CATGGCCAAATATCCTGCCAAGCAGCCACTCGTGAGCGTGGTGGACACCATAGCCAAGCAACTGGCGCAGATCGAGACGG
ACCTGAAGTCTCGAACAGCAGCCTACAACACTCTGAAGACAAACCTGGAGAACCTGGAGAAGAAATCCATGGGGAACCTC
TTCACCCGGACACTGAGCGATATTGTGAACAAAGAGGACTTCGTGCTGGATTCTGAGTATCTCGTCACGCTTCTGGTCAT
TGTCCCCAAACCAAACTACTCACAATGGCAAAAAACCTACGAATCTCTCTCAGACATGGTGGTCCCTCGATCGACCAAAC
TCATTACTGAGGACAAGGAGGGCGGCCTTTTCACTGTGACTCTGTTTCGAAAAGTGATTGAAGATTTCAAAAGCAAAGCC
AGAGAAAACAAGTTCACTGTTCGTGAATTTTACTATGATGAGAAAGAAATTAAAAGGGAAAGGGAGGAGATGGCCCGATT
GCTGTCTGATAAGAAGCAACAGTATCAAACTTCCTGTGTTGCTCTTAAAAAGGGATCATCCACCTTCCCGGACCACAAGG
TTAAGGTAACCCCGCTAGGTAACCCCGATAGGCCCGCTGCGGGGCAGAGCGACAGAGAGAGAGAGAGTGAGGGCGAGGGT
GAGGGCCCCCTGCTGCGCTGGCTCAAGGTGAACTTCAGCGAAGCCTTCATTGCCTGGATCCACATCAAGGCCCTGAGAGT
GTTCGTGGAGTCCGTGCTCAGGTATGGGCTACCAGTGAACTTCCAGGCAGTGCTCCTGCAGCCACAAAAGAAGTCATCCG
CCAAACGTTTACGGGAGGTTCTAAACTCTGTCTTCCGACACCTGGATGAAGTAGCTGCTACAAGTATACTGGATGCATCT
GTGGAGATCCCGGGACTGCAACTCAGTAATCAAGACTATTTTCCTTATGTCTACTTCCATATCGACCTTAGTCTTCTTGA
CTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 2 .00 RPM |
| SRP051959_skeletal_muscle | 0 .39 RPM |
| SRP051959_lymph_node | 2 .19 RPM |
| SRP051959_lung | 9 .63 RPM |
| SRP051959_liver | 0 .97 RPM |
| SRP051959_kidney | 6 .17 RPM |
| SRP051959_heart | 0 .89 RPM |
| SRP051959_colon | 1 .82 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000001927 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000014803 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000009748 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000009886 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1089 | 90.75 | 73.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3461 | 90.85 | 74.28 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000006660 retrocopies