Parental gene: | CTNNA1, ENSCJAG00000006820 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 2:35633629..35812858(+) |
>ENSCJAG00000006820
ATGACTGCTGTTCACGCAGGCAACATAAACACAGGCAACATAAATGTCAAGTGGGACCCCAAAAGTCTGGAGATCAGGAC
TCTGGCAGTTGAGAGACTGTTGGAGCCCCTTGTTACACAGGTTACAACCCTGGTAAACACCAATAGTAAGGGGCCCTCTA
ATAAGAAGAGAGGTCGTTCCAAGAAGGCTCATGTTTTGGCTGCATCTGTTGAACAAGCAACTGAGAATTTCTTGGACAAG
GGGGATAAAATTGCAAAGGAGAGCCAGTTTCTCAAGGAGGAGCTTGTGGCTGCTGTAGAAGATGTTCGAAAACAAGGTGA
TTTGATGAAGACTGCCGCGGGAGAGTTCGCAGATGATCCCTGCTCTTCTGTGAAGCGAGGCAACATGGTTCGGGCAGCTC
GAGCTTTGCTCTCTGCTGTTACCCGGTTGCTGATTTTGGCTGACATGGCAGATGTCTACAAATTACTTGTTCAGCTGAAA
GTTGTGGAAGATGGTATCTTGAAGTTAAGGAATGCTGGCAATGAACAAGACTTAGGAATGCAGTATAAAGCCCTAAAACC
TGAAGTGGATAAGCTGAACATTATGGCAGCCAAAAGGCAACAGGAACTGAAAGATGTTGGCCATCGTGATCAGATGGCTG
CAGCTAGAGGAATCCTGCAGAAGAATGTTCCGATCCTCTATACTGCATCCCAGGCATGCCTACAGCACCCTGATGTCGCA
GCCTATAAGGCCAACAGGGACCTGATATACAAGCAGCTGCAGCAGGCGGTCACGGGCATTTCCAATGCAGCCCAGGCCAC
TGCCTCAGACGATGCCTCCCAGCACCAGGGGGGAGGAGGAGGAGAACTGGCATATGCACTCAATAACTTTGATAAACAAA
TCATTGTGGACCCCTTGAGCTTCAGTGAGGAGCGCTTTAGGCCTTCCCTGGAGGAGCGTCTGGAAAGCATCATTAGCGGG
GCTGCCTTGATGGCCGACTCATCCTGCACTCGTGACGATCGTCGTGAGCGAATTGTGGCAGAATGTAATGCTGTTCGCCA
GGCCCTGCAGGACCTGCTTTCTGAGTACATGGGCAATGCTGGACGTAAAGAAAGAAGTGATGCACTCAATTCTGCAATAG
ATAAAATGACCAAGAAGACCAGGGACTTGCGTAGACAGCAGCTCCGCAAAGCTGTCATGGACCATGTTTCAGATTCTTTT
CTGGAAACCAATGTTCCACTTTTGGTATTGATTGAAGCTGCAAAGAATGGAAATGAGAAAGAAGTTAAGGAGTATGCCCA
AGTTTTTCGTGAACATGCCAACAAGTTAATTGAGGTTGCCAACTTGGCCTGTTCCATCTCAAATAATGAAGAAGGTGTAA
AGCTTGTTCGAATGTCTGCAAGCCAGTTAGAAGCCCTCTGTCCTCAGGTTATCAACGCTGCATTGGCTTTAGCAGCAAAA
CCACAGAGTAAACTGGCCCAAGAGAACATGGATCTTTTTAAAGAACAATGGGAAAAACAAGTCCGTGTTCTCACAGATGC
TGTCGATGACATAACTTCCATTGATGACTTCTTGGCTGTCTCAGAGAATCACATTTTGGAAGATGTGAACAAATGTGTCA
TTGCTCTCCAAGAGAAGGATGTGGATGGCCTGGACCGCACAGCTGGTGCAATTCGAGGCCGGGCAGCCCGGGTCATTCAC
GTGGTCACCTCAGAGATGGACAACTATGAGCCAGGAGTCTACACAGAGAAGGTTCTGGAAGCCACTAAGCTGCTCTCTAA
CACAGTCATGCCACGTTTTACTGAGCAAGTAGAAGCGGCCGTGGAAGCCCTCAGCACGGACCCTGCCCAGCCCATGGATG
AGAATGAGTTTATCGATGCCTCCCGCCTGGCATATGATGGCATCCGGGACATCAGGAAAGCAGTGCTGATGATAAGGACC
CCTGAGGAGTTGGATGACTCTGACTTTGAGACGGAAGATTTCGATGTCAGAAGTAGGACGAGTGTCCAGACAGAAGACGA
TCAGCTGATAGCTGGCCAGAGTGCCCGGGCGATCATGGCTCAGCTTCCCCAGGAGCAGAAAGCGAAGATTGCAGAACAGG
TGGCCAGCTTCCAGGAAGAAAAGAGCAAGCTGGATGCTGAAGTGTCCAAATGGGATGACAGTGGCAATGACATCATTGTG
CTGGCCAAGCAGATGTGCATGATTATGATGGAGATGACTGACTTTACCCGAGGTAAAGGACCACTCAAAAATACATCAGA
TGTCATCAGTGCTGCCAAGAAAATTGCTGAGGCAGGATCCAGGATGGACAAGCTTGGCCGCACCATTGCAGACCACTGCC
CCGACTCGGCCTGCAAGCAGGACCTGCTGGCCTACCTGCAACGCATCGCCCTCTACTGCCACCAGCTCAACATCTGCAGC
AAGGTCAAGGCTGAGGTGCAGAATCTCGGCGGGGAGCTTGTTGTCTCTGGGGTGGACAGCGCCATGTCCCTGATCCAGGC
AGCCAAGAACTTGATGAATGCCGTGGTCCAGACCGTGAAGGCATCTTACGTCGCCTCTACCAAATACCAAAAGTCGCAGG
GTATGGCTTCCCTCAACCTTCCTGCTGTGTCATGGAAGATGAAGGCACCAGAGAAAAAGCCCTTGGTGAAGAGAGAGAAA
CAGGATGAGACACAAACCAAGATTAAACGGGCATCTCAAAAGAAGCACGTGAACCCAGTGCAGGCCCTCAGTGAGTTCAA
AGCCATGGACAGCATCTAG
ATGACTGCTGTTCACGCAGGCAACATAAACACAGGCAACATAAATGTCAAGTGGGACCCCAAAAGTCTGGAGATCAGGAC
TCTGGCAGTTGAGAGACTGTTGGAGCCCCTTGTTACACAGGTTACAACCCTGGTAAACACCAATAGTAAGGGGCCCTCTA
ATAAGAAGAGAGGTCGTTCCAAGAAGGCTCATGTTTTGGCTGCATCTGTTGAACAAGCAACTGAGAATTTCTTGGACAAG
GGGGATAAAATTGCAAAGGAGAGCCAGTTTCTCAAGGAGGAGCTTGTGGCTGCTGTAGAAGATGTTCGAAAACAAGGTGA
TTTGATGAAGACTGCCGCGGGAGAGTTCGCAGATGATCCCTGCTCTTCTGTGAAGCGAGGCAACATGGTTCGGGCAGCTC
GAGCTTTGCTCTCTGCTGTTACCCGGTTGCTGATTTTGGCTGACATGGCAGATGTCTACAAATTACTTGTTCAGCTGAAA
GTTGTGGAAGATGGTATCTTGAAGTTAAGGAATGCTGGCAATGAACAAGACTTAGGAATGCAGTATAAAGCCCTAAAACC
TGAAGTGGATAAGCTGAACATTATGGCAGCCAAAAGGCAACAGGAACTGAAAGATGTTGGCCATCGTGATCAGATGGCTG
CAGCTAGAGGAATCCTGCAGAAGAATGTTCCGATCCTCTATACTGCATCCCAGGCATGCCTACAGCACCCTGATGTCGCA
GCCTATAAGGCCAACAGGGACCTGATATACAAGCAGCTGCAGCAGGCGGTCACGGGCATTTCCAATGCAGCCCAGGCCAC
TGCCTCAGACGATGCCTCCCAGCACCAGGGGGGAGGAGGAGGAGAACTGGCATATGCACTCAATAACTTTGATAAACAAA
TCATTGTGGACCCCTTGAGCTTCAGTGAGGAGCGCTTTAGGCCTTCCCTGGAGGAGCGTCTGGAAAGCATCATTAGCGGG
GCTGCCTTGATGGCCGACTCATCCTGCACTCGTGACGATCGTCGTGAGCGAATTGTGGCAGAATGTAATGCTGTTCGCCA
GGCCCTGCAGGACCTGCTTTCTGAGTACATGGGCAATGCTGGACGTAAAGAAAGAAGTGATGCACTCAATTCTGCAATAG
ATAAAATGACCAAGAAGACCAGGGACTTGCGTAGACAGCAGCTCCGCAAAGCTGTCATGGACCATGTTTCAGATTCTTTT
CTGGAAACCAATGTTCCACTTTTGGTATTGATTGAAGCTGCAAAGAATGGAAATGAGAAAGAAGTTAAGGAGTATGCCCA
AGTTTTTCGTGAACATGCCAACAAGTTAATTGAGGTTGCCAACTTGGCCTGTTCCATCTCAAATAATGAAGAAGGTGTAA
AGCTTGTTCGAATGTCTGCAAGCCAGTTAGAAGCCCTCTGTCCTCAGGTTATCAACGCTGCATTGGCTTTAGCAGCAAAA
CCACAGAGTAAACTGGCCCAAGAGAACATGGATCTTTTTAAAGAACAATGGGAAAAACAAGTCCGTGTTCTCACAGATGC
TGTCGATGACATAACTTCCATTGATGACTTCTTGGCTGTCTCAGAGAATCACATTTTGGAAGATGTGAACAAATGTGTCA
TTGCTCTCCAAGAGAAGGATGTGGATGGCCTGGACCGCACAGCTGGTGCAATTCGAGGCCGGGCAGCCCGGGTCATTCAC
GTGGTCACCTCAGAGATGGACAACTATGAGCCAGGAGTCTACACAGAGAAGGTTCTGGAAGCCACTAAGCTGCTCTCTAA
CACAGTCATGCCACGTTTTACTGAGCAAGTAGAAGCGGCCGTGGAAGCCCTCAGCACGGACCCTGCCCAGCCCATGGATG
AGAATGAGTTTATCGATGCCTCCCGCCTGGCATATGATGGCATCCGGGACATCAGGAAAGCAGTGCTGATGATAAGGACC
CCTGAGGAGTTGGATGACTCTGACTTTGAGACGGAAGATTTCGATGTCAGAAGTAGGACGAGTGTCCAGACAGAAGACGA
TCAGCTGATAGCTGGCCAGAGTGCCCGGGCGATCATGGCTCAGCTTCCCCAGGAGCAGAAAGCGAAGATTGCAGAACAGG
TGGCCAGCTTCCAGGAAGAAAAGAGCAAGCTGGATGCTGAAGTGTCCAAATGGGATGACAGTGGCAATGACATCATTGTG
CTGGCCAAGCAGATGTGCATGATTATGATGGAGATGACTGACTTTACCCGAGGTAAAGGACCACTCAAAAATACATCAGA
TGTCATCAGTGCTGCCAAGAAAATTGCTGAGGCAGGATCCAGGATGGACAAGCTTGGCCGCACCATTGCAGACCACTGCC
CCGACTCGGCCTGCAAGCAGGACCTGCTGGCCTACCTGCAACGCATCGCCCTCTACTGCCACCAGCTCAACATCTGCAGC
AAGGTCAAGGCTGAGGTGCAGAATCTCGGCGGGGAGCTTGTTGTCTCTGGGGTGGACAGCGCCATGTCCCTGATCCAGGC
AGCCAAGAACTTGATGAATGCCGTGGTCCAGACCGTGAAGGCATCTTACGTCGCCTCTACCAAATACCAAAAGTCGCAGG
GTATGGCTTCCCTCAACCTTCCTGCTGTGTCATGGAAGATGAAGGCACCAGAGAAAAAGCCCTTGGTGAAGAGAGAGAAA
CAGGATGAGACACAAACCAAGATTAAACGGGCATCTCAAAAGAAGCACGTGAACCCAGTGCAGGCCCTCAGTGAGTTCAA
AGCCATGGACAGCATCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 96 .05 RPM |
| SRP051959_skeletal_muscle | 31 .86 RPM |
| SRP051959_lymph_node | 34 .29 RPM |
| SRP051959_lung | 120 .10 RPM |
| SRP051959_liver | 70 .57 RPM |
| SRP051959_kidney | 136 .31 RPM |
| SRP051959_heart | 186 .65 RPM |
| SRP051959_colon | 222 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000012995 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011865 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_963 | 88.57 | 83.33 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000006820 retrocopies