Parental gene:

ALDOA, ENSCJAG00000006874

Aliases:None
Description:Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:F6R6I5]
Organism:Marmoset (Callithrix jacchus)
Coordinates:12:27783623..27799357(-)


>ENSCJAG00000006874
CTCATCCAGGCCTCTAGCCCGTGGAATCCAACCCCGGCTCCTGTCAGCAGCCCTCCCCTGCTGCTCCCCATCCCTGCCAT
CGTCTTCATCGCTGTGGGCATCTATTTGTTGCTGCTGGGTCTAGTGCTGCTGACTAGACACTGCCTGCTGGCCCAGGGCT
GCTGCGTGGACAGTAGCTCCCCCTGCAGGAAGCAAGGTGCCTCTGGTTCCCCAAACTGCTGCTGGACCTGTGCCAAAGCC
TGTGACTTTCCTCTGCCTAACCCGGCCCAGTTCCTGGATGCCTGCTGCCCCCAGCCCACCGGAGCTGGTATGAATCACGT
GGAGCCAGAAAAGAAAATAGCATGCCAGCCAGAGAAAGGTGATGTGTGTAACATTAAATTGTGGGGCAAGGAGTGCTTTT
TCAGTCATTCACTGACCCTCAGGACTGGGCACCTCACTGCCCCCGCTGCTGCCCACTCTGCGACTGTGCCTGTACATGCC
AGCTTCCCGACTGCCAGAGCCTCAACTGTCTCTGCTTCGAGATCAAGCTCCGATGAGGATCCAGTCCTGCCCTCTGGGGA
GCGGCCAGCCCCCAGGGCCCATGTGCCCTCCTCCTTGAGGGGCCTCTCTCCAGGCTGCTGGAACCACAAATGGCCTGCCC
AGCACCCAAGCCTGGGAACTGGAAGTGGCTGTGCAGGGCCTGGCTCCCTGCAGGGCAGGACTCTTGGCCGGCTGCATGGC
ACCTCCTCTGGATGGCCAGAGAGGGCCCTTTCCCTTCGACAGATCCCTGGCCAGAGATTTATTTCTCTTGACAACCAAGG
GCCTCTGTCTGGATTTCCAAGGAAGACATTTCCTTTGAAGCACCGGCAAGGTGGCCCCATGGCAAGGCGCAAGCCAGAAG
GGTCCAGCTTCAACATGACCCACCTATCCATGGCTATGGCCTTTTCCTTTCCCCCAGTTGCCAGTGAGCAACTCCACCCT
CAGCTGGGCAACACCCAGCACCAGACAGAGTTAGGAAAGGAACTTGCTACCACCAGCACCATGCCCTATCAATATCCAGC
GCTGACCCCGGAGCAGAAGAAGGAGCTGTCTGACATCGCTCACCGCATCGTGGCCCCGGGCAAGGGCATCCTGGCTGCAG
ATGAGTCCACTGGGAGCATTGCCAAGCGGCTGCAGTCCATTGGCACTGAGAACACCGAGGAGAACCGGCGCTTCTATCGT
CAGCTGCTGCTGACAGCTGATGACCGGGTGAACCCCTGCATCGGGGGTGTCATCCTCTTCCACGAGACACTCTACCAGAA
GGCGGATGATGGGCGTCCCTTCCCCCAAGTTATCAAATCCAAGGGCGGTGTTGTGGGCATCAAGGTAGACAAGGGCGTGG
TCCCCCTGGCAGGGACAAATGGTGAGACCACCACCCAAGGGCTGGATGGGCTGTCTGAGCGCTGTGCCCAGTACAAGAAG
GATGGCGCTGACTTCGCCAAGTGGCGTTGTGTGCTGAAGATTGGGGAGCATACCCCCTCAGCCCTTGCCATCATGGAAAA
TGCCAACGTCCTGGCCCGTTATGCCAGCATCTGTCAGCAGAATGGCATTGTGCCCATCGTGGAGCCTGAAATCCTCCCTG
ATGGGGACCATGACTTGAAGCGCTGTCAGTATGTGACTGAGAAGGTGCTGGCTGCTGTCTACAAGGCTCTGAGCGACCAC
CACATCTACCTGGAAGGCACCTTGCTGAAGCCCAACATGGTTACCCCAGGCCACGCCTGCACTCAGAAGTTTTCTCATGA
GGAGATTGCCATGGCGACTGTCACAGCGCTGCGCCGCACGGTTCCCCCTGCTGTCCCTGGCATCACCTTCCTTTCTGGAG
GCCAGAGTGAGGAGGAGGCATCCATCAACCTCAATGCCATCAACAAGTGCCCCCTGCTGAAGCCCTGGGCCCTGACCTTC
TCCTACGGCCGAGCCCTGCAGGCCTCTGCCCTGAAGGCCTGGGGTGGGAAGAAGGAAAACAAGAAGGCAGCGCAGGAGGA
GTACATCAAGCGCGCCCTGGCCAACAGCCTCGCCTGTCAAGGAAAGTACACCCCAAGCGGTCAGGCTGGGGCTGCTGCCA
GCGAGTCCCTCTTCATCTCTAACCATGCCTACTAA

Library Parental gene expression (RPM)
SRP051959_spleen 71 .76 RPM
SRP051959_skeletal_muscle 1812 .97 RPM
SRP051959_lymph_node 65 .11 RPM
SRP051959_lung 87 .34 RPM
SRP051959_liver 56 .27 RPM
SRP051959_kidney 201 .54 RPM
SRP051959_heart 302 .17 RPM
SRP051959_colon 136 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008221 ortholog_many2many 2 retrogenes
retro_cfam_190, retro_cfam_631,
Cavia porcellus ENSCPOG00000007434 ortholog_one2many 1 retrogene
retro_cpor_951,
Echinops telfairi ENSETEG00000019230 ortholog_many2many 1 retrogene
retro_etel_20,
Homo sapiens ENSG00000149925 ortholog_one2many 1 retrogene
retro_hsap_740,
Gorilla gorilla ENSGGOG00000013979 ortholog_one2many 1 retrogene
retro_ggor_621,
Myotis lucifugus ENSMLUG00000011210 ortholog_one2many 3 retrogenes
retro_mluc_1172, retro_mluc_2634, retro_mluc_808,
Macaca mulatta ENSMMUG00000000983 ortholog_many2many 1 retrogene
retro_mmul_2596,
Monodelphis domestica ENSMODG00000015696 ortholog_many2many 4 retrogenes
retro_mdom_1236, retro_mdom_1356, retro_mdom_528, retro_mdom_96,
Mus musculus ENSMUSG00000030695 ortholog_many2many 3 retrogenes
retro_mmus_2160, retro_mmus_42, retro_mmus_90,
Nomascus leucogenys ENSNLEG00000002152 ortholog_one2many 1 retrogene
retro_nleu_133,
Oryctolagus cuniculus ENSOCUG00000006329 ortholog_many2many 1 retrogene
retro_ocun_1550,
Ochotona princeps ENSOPRG00000009760 ortholog_one2many 1 retrogene
retro_opri_914,
Pongo abelii ENSPPYG00000007244 ortholog_one2many 1 retrogene
retro_pabe_636,
Pan troglodytes ENSPTRG00000007983 ortholog_one2many 1 retrogene
retro_ptro_526,
Rattus norvegicus ENSRNOG00000023647 ortholog_many2many 7 retrogenes
retro_rnor_1343, retro_rnor_1541, retro_rnor_1796, retro_rnor_1807, retro_rnor_226, retro_rnor_2791, retro_rnor_536,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1803 90.19 89.47
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Download FASTA sequences of all ENSCJAG00000006874 retrocopies