Parental gene: | ENSCJAG00000007193 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 12:28054051..28069663(-) |
>ENSCJAG00000007193
ATGGCCGCAGGGGTCTCGACGCTTCAGAGGCGACGCGAGATGGCGGCAGCGACGGCGACCTCAGTGNCAGGAGCTGGTCG
CTGTCGGCTAAGCAAGATAGGAGCTAGTCGTCGCCCACCTCCAGCTCGCGTAAGGGTGGCTGTGCGACTGCGGCCATTTG
TGGATAGAACAGCTGGAACAAGCGATCCCCCCTGTGTGCGGGGCATGGACAGCTGCTCTCTAGAGATTGCTAACTGGAGG
AACCACCAGGAGACTCTCAAATACCAGTTTGATGCCTTCTATGGGGAGAGGAGTACTCAGCAGGACATCTACACAGGTTC
AGTGCAGCCCATCCTAAGGCACTTGCTAGAAGGACAGAATGCCAGTGTGCTTGCCTATGGACCCACAGGAGCTGGGAAGA
CACACACAATGCTGGGCAGCCCGGAGCAACCTGGGGTGATCCCACGGGCTCTCATGGACCTCCTGCAGCTCACAAGGGAG
GAGGGCACCGAGGGCCGGCCATGGGCCCTGTCTGTCACCATGTCCTACTTAGAGATCTACCAGGAGAAGGTATTAGACCT
CCTGGACCCTGCATCAGGAGACCTGGTGATCCGAGAAGACTGCCGGGGGAATATCCTGATTCCGGGCCTCACGCAGAAGC
CCATCACTAGCTTTGCTGATTTTGAGCGGCACTTCCTGCCAGCCAGTCGAAACCGGACTGTAGGTGCCACCCGGCTCAAC
CAGCGCTCCTCCCGCAGTCATGCTGTGCTCCTGGTCAAGGTGGACCAGCGGGAACGTTTGACCCCATTTCGCCAGCGAGA
GGGAAAACTCTACCTCATTGACTTGGCTGGGTCAGAGGACAACCGTCGCACAGGCAACAAGGGCCTTCGGCTAAAAGAGA
GCGGAGCCATCAACACCTCCCTGTTTGTCCTGGGCAAGGTGGTGGATGCACTGAATCAGGGCCTTCCTCGTGTACCTTAC
CGAGATAGCAAGCTCACTCGCCTACTGCAGGATTCTCTGGGTGGCTCAGCTCACAGCATCCTTATTGCCAACATTGCCCC
TGAGAGACGCTTCTACCTAGACACCGTCTCCGCACTCAACTTCGCTGCCAGGTCTAAGGAGGTGATCAACCGGCCTTTTA
CCAATGAAAGCCTGCAGCCTCCCGTCTTGGCACCTGTTAAGCTGTCTCAGAAAGAATTCCTTGGTCCACCAGAGGCAAAG
AGAGCCCGAGGCCCTGAGGAAGAGGAGATTGGGAGCCCTGAGCCCATGGCAGCTCCAGCCTCTGCCTCACAGAAACTCAG
CCCCCTACAGAAGCTAAGCAGCATGGACCCGGCCATGCTGGAGCGCCTCCTGAGCTTGGACCGTCTGCTGGCCTCCCAAG
GGAGCCAGGGGGTCCCTCTGTTGAGTACCCCAAAGCGAGAGCGGATGGTGCTCATGAAGACAGTGGAAGAGAAGGACTTA
GAGATTGAGAGGCTTAAGATGAAGCAAAAAGAACTGGAGGCCAAGATGTTGGCCCAAAAGGCTGAAGACTCAAAGGAAAA
GGAGAACCATTATCCCACAATGCTCCGGCCCCTTTCGCATCGCACAGTCACAATGGCAAAGCCCCTGAAAAAGGCTGTGG
TGATGCCCCTACAGCTAATTCAGGAGCAGGCAGCATCCCCAAATGCCGAGATCCATATCCTGAGGAATAAAGGCCGGAAG
AGAAAGCTGGAGTCCCTGGATGCCTCAGAGCCTGAGGAGAAGGCAGAGGACTGCTGGGAGCTACAGATCAGCCCGGAGCT
TTTGGCTCATGGGCGCAAAAAAATACTGGATCTGCTGAACGAAGGCTCAGCCAGGGATCTCCGCAGTCTTCAGCGCATTG
GCCCGAAGAAGGCCCAGCTCATCGTGGGCTGGCGGGAGCTCCACGGCCCCTTCAGCCAGGTGGAGGACCTGGAACGCGTG
GAGGGCATAACAGGGAAACAGATGGAGTCCTTCCTGAAGGCGAACATCCTGGGTCTCGCCGCCGGCCAGCGCTGTGACCT
GTCTTGA
ATGGCCGCAGGGGTCTCGACGCTTCAGAGGCGACGCGAGATGGCGGCAGCGACGGCGACCTCAGTGNCAGGAGCTGGTCG
CTGTCGGCTAAGCAAGATAGGAGCTAGTCGTCGCCCACCTCCAGCTCGCGTAAGGGTGGCTGTGCGACTGCGGCCATTTG
TGGATAGAACAGCTGGAACAAGCGATCCCCCCTGTGTGCGGGGCATGGACAGCTGCTCTCTAGAGATTGCTAACTGGAGG
AACCACCAGGAGACTCTCAAATACCAGTTTGATGCCTTCTATGGGGAGAGGAGTACTCAGCAGGACATCTACACAGGTTC
AGTGCAGCCCATCCTAAGGCACTTGCTAGAAGGACAGAATGCCAGTGTGCTTGCCTATGGACCCACAGGAGCTGGGAAGA
CACACACAATGCTGGGCAGCCCGGAGCAACCTGGGGTGATCCCACGGGCTCTCATGGACCTCCTGCAGCTCACAAGGGAG
GAGGGCACCGAGGGCCGGCCATGGGCCCTGTCTGTCACCATGTCCTACTTAGAGATCTACCAGGAGAAGGTATTAGACCT
CCTGGACCCTGCATCAGGAGACCTGGTGATCCGAGAAGACTGCCGGGGGAATATCCTGATTCCGGGCCTCACGCAGAAGC
CCATCACTAGCTTTGCTGATTTTGAGCGGCACTTCCTGCCAGCCAGTCGAAACCGGACTGTAGGTGCCACCCGGCTCAAC
CAGCGCTCCTCCCGCAGTCATGCTGTGCTCCTGGTCAAGGTGGACCAGCGGGAACGTTTGACCCCATTTCGCCAGCGAGA
GGGAAAACTCTACCTCATTGACTTGGCTGGGTCAGAGGACAACCGTCGCACAGGCAACAAGGGCCTTCGGCTAAAAGAGA
GCGGAGCCATCAACACCTCCCTGTTTGTCCTGGGCAAGGTGGTGGATGCACTGAATCAGGGCCTTCCTCGTGTACCTTAC
CGAGATAGCAAGCTCACTCGCCTACTGCAGGATTCTCTGGGTGGCTCAGCTCACAGCATCCTTATTGCCAACATTGCCCC
TGAGAGACGCTTCTACCTAGACACCGTCTCCGCACTCAACTTCGCTGCCAGGTCTAAGGAGGTGATCAACCGGCCTTTTA
CCAATGAAAGCCTGCAGCCTCCCGTCTTGGCACCTGTTAAGCTGTCTCAGAAAGAATTCCTTGGTCCACCAGAGGCAAAG
AGAGCCCGAGGCCCTGAGGAAGAGGAGATTGGGAGCCCTGAGCCCATGGCAGCTCCAGCCTCTGCCTCACAGAAACTCAG
CCCCCTACAGAAGCTAAGCAGCATGGACCCGGCCATGCTGGAGCGCCTCCTGAGCTTGGACCGTCTGCTGGCCTCCCAAG
GGAGCCAGGGGGTCCCTCTGTTGAGTACCCCAAAGCGAGAGCGGATGGTGCTCATGAAGACAGTGGAAGAGAAGGACTTA
GAGATTGAGAGGCTTAAGATGAAGCAAAAAGAACTGGAGGCCAAGATGTTGGCCCAAAAGGCTGAAGACTCAAAGGAAAA
GGAGAACCATTATCCCACAATGCTCCGGCCCCTTTCGCATCGCACAGTCACAATGGCAAAGCCCCTGAAAAAGGCTGTGG
TGATGCCCCTACAGCTAATTCAGGAGCAGGCAGCATCCCCAAATGCCGAGATCCATATCCTGAGGAATAAAGGCCGGAAG
AGAAAGCTGGAGTCCCTGGATGCCTCAGAGCCTGAGGAGAAGGCAGAGGACTGCTGGGAGCTACAGATCAGCCCGGAGCT
TTTGGCTCATGGGCGCAAAAAAATACTGGATCTGCTGAACGAAGGCTCAGCCAGGGATCTCCGCAGTCTTCAGCGCATTG
GCCCGAAGAAGGCCCAGCTCATCGTGGGCTGGCGGGAGCTCCACGGCCCCTTCAGCCAGGTGGAGGACCTGGAACGCGTG
GAGGGCATAACAGGGAAACAGATGGAGTCCTTCCTGAAGGCGAACATCCTGGGTCTCGCCGCCGGCCAGCGCTGTGACCT
GTCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 3 .87 RPM |
| SRP051959_skeletal_muscle | 0 .98 RPM |
| SRP051959_lymph_node | 4 .50 RPM |
| SRP051959_lung | 1 .90 RPM |
| SRP051959_liver | 0 .58 RPM |
| SRP051959_kidney | 1 .06 RPM |
| SRP051959_heart | 1 .68 RPM |
| SRP051959_colon | 7 .72 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Mus musculus | ENSMUSG00000030677 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000266 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000017206 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_144 | 97.29 | 99.25 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000007193 retrocopies