Parental gene: | PDK1, ENSCJAG00000007507 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 6:45892784..45956584(-) |
>ENSCJAG00000007507
ATGAGGCTGGCGCGGCTGCTTAGCGGAGCTGCCTCGACCGGCCCCAGCCCGAGGCTGCGTGCCGCCGGCCCCGGCGTCAC
CCGCAGCCTCAGCTCGGACTCGGGCTCCGGCCCGGCGTCAGAGCGCGGCGTTCCGGGCCAGGTGGACTTCTACGCGCGCT
TCTCGCCGTCCCCGCTCTCCATGAAGCAGTTCCTGGACTTCGGATCAGTGAATGCTTGCGAAAAGACATCATTTATGTTT
CTGCGGCAAGAGTTGCCTGTCAGACTGGCAAATATAATGAAAGAAATAAGTCTCCTCCCAGACAATCTTCTCCGGACACC
ATCTGTTCAATTAGTACAAAGCTGGTATATCCAGAGTCTTCAGGAGCTTCTTGATTTTAAGGACAAAAGCGCTGAGGATG
CTAAAGCTATTTATGACTTTACAGATACTGTGATACGGATCAGAAACCGACACAATGATGTCATTCCCACAATGGCCCAG
GGTGTGATTGAATACAAGGAGAGCTTTGGGGTGGATCCTGTCACCAGCCAGAATGTTCAGTACTTTTTGGATCGATTCTA
CATGAGTCGCATTTCAATTAGAATGTTACTCAATCAGCACTCTTTATTGTTTGGTGGAAAAGGCAAAGGAAGTCCATCTC
ATCGAAAACACATTGGAAGCATAAATCCAAACTGCAATGTAGTTGAAGTTATTAAAGATGGCTATGAAAATGCTAGGCGT
CTGTGTGATTTGTATTATATTAACTCTCCCGAACTAGAACTTGGAGAACTAAATGCAAAATCACCAGGACAGCCAATACA
AGTGGTTTATGTACCATCCCATCTCTATCACATGGTGTTTGAACTTTTCAAGAATGCAATGAGAGCAACTATGGAGCACC
ATGCTGACAAAGGTGTTTACCCCCCTATTCAAGTTTATGTCACGCTGGGTAATGAAGATTTGACTGTGAAGATGAGTGAC
CGAGGAGGTGGTGTCCCTTTGAGGAAAATTGACAGACTCTTCAACTACATGTATTCAACTGCACCCAGACCTCGTGTTGA
GACTTCCCGGGCAGTGCCCCTGGCTGGTTTTGGTTATGGATTGCCCATATCACGTCTTTACGCACAATACTTCCAAGGAG
ACCTGAAGCTATATTCTCTAGAGGGTTACGGGACAGACGCAGTTATCTACATTAAGGCTCTGTCAACAGACTCAATAGAA
AGACTCCCAGTATATAACAAAGCTGCATGGAAGCATTACAACACAAACCACGAGGCTGATGACTGGTGCGTCCCCAGCAG
AGAACCCAAAGACATGACCACCTTCCGCAGTGCCTAG
ATGAGGCTGGCGCGGCTGCTTAGCGGAGCTGCCTCGACCGGCCCCAGCCCGAGGCTGCGTGCCGCCGGCCCCGGCGTCAC
CCGCAGCCTCAGCTCGGACTCGGGCTCCGGCCCGGCGTCAGAGCGCGGCGTTCCGGGCCAGGTGGACTTCTACGCGCGCT
TCTCGCCGTCCCCGCTCTCCATGAAGCAGTTCCTGGACTTCGGATCAGTGAATGCTTGCGAAAAGACATCATTTATGTTT
CTGCGGCAAGAGTTGCCTGTCAGACTGGCAAATATAATGAAAGAAATAAGTCTCCTCCCAGACAATCTTCTCCGGACACC
ATCTGTTCAATTAGTACAAAGCTGGTATATCCAGAGTCTTCAGGAGCTTCTTGATTTTAAGGACAAAAGCGCTGAGGATG
CTAAAGCTATTTATGACTTTACAGATACTGTGATACGGATCAGAAACCGACACAATGATGTCATTCCCACAATGGCCCAG
GGTGTGATTGAATACAAGGAGAGCTTTGGGGTGGATCCTGTCACCAGCCAGAATGTTCAGTACTTTTTGGATCGATTCTA
CATGAGTCGCATTTCAATTAGAATGTTACTCAATCAGCACTCTTTATTGTTTGGTGGAAAAGGCAAAGGAAGTCCATCTC
ATCGAAAACACATTGGAAGCATAAATCCAAACTGCAATGTAGTTGAAGTTATTAAAGATGGCTATGAAAATGCTAGGCGT
CTGTGTGATTTGTATTATATTAACTCTCCCGAACTAGAACTTGGAGAACTAAATGCAAAATCACCAGGACAGCCAATACA
AGTGGTTTATGTACCATCCCATCTCTATCACATGGTGTTTGAACTTTTCAAGAATGCAATGAGAGCAACTATGGAGCACC
ATGCTGACAAAGGTGTTTACCCCCCTATTCAAGTTTATGTCACGCTGGGTAATGAAGATTTGACTGTGAAGATGAGTGAC
CGAGGAGGTGGTGTCCCTTTGAGGAAAATTGACAGACTCTTCAACTACATGTATTCAACTGCACCCAGACCTCGTGTTGA
GACTTCCCGGGCAGTGCCCCTGGCTGGTTTTGGTTATGGATTGCCCATATCACGTCTTTACGCACAATACTTCCAAGGAG
ACCTGAAGCTATATTCTCTAGAGGGTTACGGGACAGACGCAGTTATCTACATTAAGGCTCTGTCAACAGACTCAATAGAA
AGACTCCCAGTATATAACAAAGCTGCATGGAAGCATTACAACACAAACCACGAGGCTGATGACTGGTGCGTCCCCAGCAG
AGAACCCAAAGACATGACCACCTTCCGCAGTGCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 9 .31 RPM |
| SRP051959_skeletal_muscle | 26 .71 RPM |
| SRP051959_lymph_node | 15 .98 RPM |
| SRP051959_lung | 6 .91 RPM |
| SRP051959_liver | 9 .18 RPM |
| SRP051959_kidney | 10 .16 RPM |
| SRP051959_heart | 24 .12 RPM |
| SRP051959_colon | 9 .23 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000008434 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022553 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009035 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000014761 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_4090 | 59.26 | 60.96 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000007507 retrocopies