Parental gene: | PADI6, ENSCJAG00000007733 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:51265995..51303585(+) |
>ENSCJAG00000007733
AAGGTCAGCGTGGAGGGCCAAGCCATGACGTCCTTCCAGAATGTCATCCGCCTGTCCCTAGACAGTCCTGCCCATGCGGT
TTGTGTGATAGGCACAGAAATCTGCTTGGATATTAGCAGGTGTGCCCCTGAGAAGTGCCAGTGCTTTAGCATCCGTGGCT
CTGAGAGGGTCATGATTGATGTGGCCAACACAGTGTTTTCTGAAAAGGAGAGCGCCACCATCTGGTGGCCCCTGTCTGAT
ACCCCCTACGCCACAGTGAAGATGATATCGCCCAGTCCTTCCATGGATGGGGACAAGGTCTCAGTCAAGTACTATGGGCT
CAACGAGGATGCCCCTGTGGGCAAGGCTGTGCTGTACCTCACTGGCATTGAGGTCTCCCTGGAGACAGACATCTACCGCA
ATGGGCAAGTTGAGGTGTCAAGAGACAAACAGGCTAAGAAAAAATGGACCTGGGGTCCCAGTGGTTGGGGTGCCATCCTG
CTTGTGAATTGCAACCCTGCTGATGCGGGCCAGCAACTTGAGGATGAGACCAAGAGAGTGATCTTCTCAGAGGAAATAAA
GAATCTGTCTCAGATGACACTGAATGTCCAAGGCCCCAGCTGCCTCTTAAAGAAATTTCGGCTGGTCCTCCATACCTCCG
AGGAAGAGTCGAAGAAGGCGAGAGTCTACTGGCCCCGAAAAGACAACTCCAGTACCTTTGAGTTGGTGCTAGGGCCCAGC
CAGTATGCCTATACCTTGGCTCTCCTCGGGGACCACTTGAAAGAGACCTTCTACCTTGAAGCTATGGAGTTTCCATCTGC
TGAATTCTCAGGCCTGATCACCTACTCTGTATCCCTGGTGGAGGAGTCTCAAGACCCGTTAATTCCAGAGACTCCGCTGT
ACAAAGACACTGTGGTGTTTCGGGTGGCTCCCTGCATCTTCATTCCCTGCACCCAGGTGCCTCTGGAGGTTTATCTGTGC
AGGGAGCTGCAGCTGCAGGGTTTTGTGGACACAGTGATGGAGCTGAGTAAGAAGAGCAACAGCCAGGTGGCCTCTGTCTA
CGAGGATCCCAGCCGCCTGGGCAGGTGGCTCCAGGATGAGATGGCCTTCTGCTACACCCAGGCACCCCACAAGACCACAT
CCTTGATCCTCGACACGCCTCGAGCCCCCAATCTTGATGAGTTCCCCATGAAATACTCACTGAGCCCCGGTATTGGCTAC
ATGATCCACGACACTGAAGACCATAAAGTGGCAAGCATGGATTCCATCGGGAACGTGATGGTGTCCCCACCTGTCAAGGT
CCAAGGGAAAGAATACCCCCTGGGCAGAGTCCTCATTGGCAGCAGCTTTTACCCCAGCATGGAGGGCCGGGCCATGAGTA
AGACCCTCCGAGACTTCCTCTATGCCCAGCAGGTCCAAGCACCGGTGGAGCTCTACTCAGATTGGCTGATGACTGGCCAC
GTGGATGAGTTCATGTGTTTCATCCCCACAGATGATAAGAGTGAGGGCAAAAAGGGCTTCCAGCTGCTCCTGGCCAGCCC
CGGCGCCTGCTACAAACTCTTCCAAGAGAAACGGAAGGAAGGCTATGGTGATGCTTTTCTGTTTGACGGAGTTAGAGCAG
ATCAGCTCCTGTCTAACAGTAAAAGGGAAGCCAAAACCATTGACCAACTTCTGGCTGATGAAAGCCTGAGGAAGCAGAAT
GAATATGTGGAGAAGTGCATTCACCTGAACCATGACATCCTGAAGACAGAGCTGGGCCTGGTGGAACAGGACATCATCGA
GATTCCCCAGCTGTTCTGCTTAGAGAAGCTGACTAATGTGCCCTCTGATCAGCAGCCTAAGAGGAGCTTCGCGAGGCCAT
ACTTCCCTAACCTGCTGCGGATGATTGTGATGGGCAAGAACCTGGGGATCCCCAAGCCTTTTGGGCCCCAAATCAAGGGC
ACTTGCTGCCTGGAAGAAAAGATACGCTGCCTGCTGGAGCCCTTGGGCTTCAAGTGCACCTTCGTCAGTGACTTCGACTG
CTACCTGGCGGATGTGGGAGATATCTGTGCCTGTGCCACCGTCCGCCGGGTGCCCTTTGCCTTCAAATGGTGGAAGATGG
TACCTTAG
AAGGTCAGCGTGGAGGGCCAAGCCATGACGTCCTTCCAGAATGTCATCCGCCTGTCCCTAGACAGTCCTGCCCATGCGGT
TTGTGTGATAGGCACAGAAATCTGCTTGGATATTAGCAGGTGTGCCCCTGAGAAGTGCCAGTGCTTTAGCATCCGTGGCT
CTGAGAGGGTCATGATTGATGTGGCCAACACAGTGTTTTCTGAAAAGGAGAGCGCCACCATCTGGTGGCCCCTGTCTGAT
ACCCCCTACGCCACAGTGAAGATGATATCGCCCAGTCCTTCCATGGATGGGGACAAGGTCTCAGTCAAGTACTATGGGCT
CAACGAGGATGCCCCTGTGGGCAAGGCTGTGCTGTACCTCACTGGCATTGAGGTCTCCCTGGAGACAGACATCTACCGCA
ATGGGCAAGTTGAGGTGTCAAGAGACAAACAGGCTAAGAAAAAATGGACCTGGGGTCCCAGTGGTTGGGGTGCCATCCTG
CTTGTGAATTGCAACCCTGCTGATGCGGGCCAGCAACTTGAGGATGAGACCAAGAGAGTGATCTTCTCAGAGGAAATAAA
GAATCTGTCTCAGATGACACTGAATGTCCAAGGCCCCAGCTGCCTCTTAAAGAAATTTCGGCTGGTCCTCCATACCTCCG
AGGAAGAGTCGAAGAAGGCGAGAGTCTACTGGCCCCGAAAAGACAACTCCAGTACCTTTGAGTTGGTGCTAGGGCCCAGC
CAGTATGCCTATACCTTGGCTCTCCTCGGGGACCACTTGAAAGAGACCTTCTACCTTGAAGCTATGGAGTTTCCATCTGC
TGAATTCTCAGGCCTGATCACCTACTCTGTATCCCTGGTGGAGGAGTCTCAAGACCCGTTAATTCCAGAGACTCCGCTGT
ACAAAGACACTGTGGTGTTTCGGGTGGCTCCCTGCATCTTCATTCCCTGCACCCAGGTGCCTCTGGAGGTTTATCTGTGC
AGGGAGCTGCAGCTGCAGGGTTTTGTGGACACAGTGATGGAGCTGAGTAAGAAGAGCAACAGCCAGGTGGCCTCTGTCTA
CGAGGATCCCAGCCGCCTGGGCAGGTGGCTCCAGGATGAGATGGCCTTCTGCTACACCCAGGCACCCCACAAGACCACAT
CCTTGATCCTCGACACGCCTCGAGCCCCCAATCTTGATGAGTTCCCCATGAAATACTCACTGAGCCCCGGTATTGGCTAC
ATGATCCACGACACTGAAGACCATAAAGTGGCAAGCATGGATTCCATCGGGAACGTGATGGTGTCCCCACCTGTCAAGGT
CCAAGGGAAAGAATACCCCCTGGGCAGAGTCCTCATTGGCAGCAGCTTTTACCCCAGCATGGAGGGCCGGGCCATGAGTA
AGACCCTCCGAGACTTCCTCTATGCCCAGCAGGTCCAAGCACCGGTGGAGCTCTACTCAGATTGGCTGATGACTGGCCAC
GTGGATGAGTTCATGTGTTTCATCCCCACAGATGATAAGAGTGAGGGCAAAAAGGGCTTCCAGCTGCTCCTGGCCAGCCC
CGGCGCCTGCTACAAACTCTTCCAAGAGAAACGGAAGGAAGGCTATGGTGATGCTTTTCTGTTTGACGGAGTTAGAGCAG
ATCAGCTCCTGTCTAACAGTAAAAGGGAAGCCAAAACCATTGACCAACTTCTGGCTGATGAAAGCCTGAGGAAGCAGAAT
GAATATGTGGAGAAGTGCATTCACCTGAACCATGACATCCTGAAGACAGAGCTGGGCCTGGTGGAACAGGACATCATCGA
GATTCCCCAGCTGTTCTGCTTAGAGAAGCTGACTAATGTGCCCTCTGATCAGCAGCCTAAGAGGAGCTTCGCGAGGCCAT
ACTTCCCTAACCTGCTGCGGATGATTGTGATGGGCAAGAACCTGGGGATCCCCAAGCCTTTTGGGCCCCAAATCAAGGGC
ACTTGCTGCCTGGAAGAAAAGATACGCTGCCTGCTGGAGCCCTTGGGCTTCAAGTGCACCTTCGTCAGTGACTTCGACTG
CTACCTGGCGGATGTGGGAGATATCTGTGCCTGTGCCACCGTCCGCCGGGTGCCCTTTGCCTTCAAATGGTGGAAGATGG
TACCTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 0 .21 RPM |
| SRP051959_skeletal_muscle | 0 .02 RPM |
| SRP051959_lymph_node | 0 .62 RPM |
| SRP051959_lung | 0 .15 RPM |
| SRP051959_liver | 0 .04 RPM |
| SRP051959_kidney | 0 .00 RPM |
| SRP051959_heart | 0 .04 RPM |
| SRP051959_colon | 0 .04 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Sus scrofa | ENSSSCG00000003484 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1086 | 96.68 | 51.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1210 | 98.23 | 56.69 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000007733 retrocopies