Parental gene:

SDHB, ENSCJAG00000007927

Aliases:None
Description:succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:HGNC Symbol;Acc:10681]
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:50893020..50933058(-)


>ENSCJAG00000007927
ATGGCGGCGGTGGTCGCCCTCTCCTTGAGGCGCCGGTTCCCGGCCACAACCGTTGGCGGAGCCTGCCTGCAGGCCTGCCG
AGGAGCCCAGACAGCTGCAGCTGCAGCTCCCCGTATCAAGAAATTTGCCATCTATCGATGGGACCCAGACAAAGCTGGTG
ACAAACCTCATATGCAGACTTATGAAGTTGACCTTAATAAATGTGGCCCCATGGTACTGGATGCTTTAATCAAGATTAAG
AATGAAATTGACTCTACTTTGACCTTCCGGAGATCATGCAGAGAAGGCATCTGTGGCTCTTGTGCAATGAACATCAATGG
AGGCAACACTCTAGCCTGCACCCGAAGGATTGACACCAACCTCAATAAAGTCTCAAAAATCTACCCTCTTCCACATATGT
ATGTGATAAAGGATCTTGTTCCCGATTTGAGCAACTTCTATGCACAGTACAAATCCATTGAGCCTTATTTGAAGAAGAAG
GATGAATCTCAGGGAGGCAAGCAGCAGTATCTGCAGTCCATAGAAGACCGTGAGAAACTGGACGGGCTCTACGAGTGCAT
TCTCTGTGCCTGCTGTAGCACCAGCTGCCCCAGCTACTGGTGGAACGGAGACAAATATCTGGGGCCTGCAGTTCTTATGC
AGGCCTATCGCTGGATGATTGACTCCAGAGACGACTTCACAGAGGAGCGCCTGGCCAAGCTGCAGGACCCGTTCTCTCTG
TACCGCTGCCACACCATCATGAACTGCACAAGGACCTGTCCCAAGGGTCTGAATCCAGGGAAGGCTATTGCAGAAATCAA
GAAAATGATGGCAACCTATAAGGAGAAGAAAGCTTCAGCTTAA

Library Parental gene expression (RPM)
SRP051959_spleen 20 .59 RPM
SRP051959_skeletal_muscle 83 .03 RPM
SRP051959_lymph_node 17 .40 RPM
SRP051959_lung 18 .87 RPM
SRP051959_liver 65 .33 RPM
SRP051959_kidney 66 .11 RPM
SRP051959_heart 60 .67 RPM
SRP051959_colon 26 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000015832 ortholog_one2one 1 retrogene
retro_cfam_587,
Choloepus hoffmanni ENSCHOG00000005664 ortholog_one2one 1 retrogene
retro_chof_2016,
Loxodonta africana ENSLAFG00000018475 ortholog_one2one 1 retrogene
retro_lafr_454,
Macropus eugenii ENSMEUG00000004817 ortholog_one2one 1 retrogene
retro_meug_1106,
Microcebus murinus ENSMICG00000016629 ortholog_one2one 1 retrogene
retro_mmur_1062,
Myotis lucifugus ENSMLUG00000000032 possible_ortholog 1 retrogene
retro_mluc_150,
Nomascus leucogenys ENSNLEG00000013264 ortholog_one2one 1 retrogene
retro_nleu_1640,
Sorex araneus ENSSARG00000013780 ortholog_one2one 1 retrogene
retro_sara_577,
Tupaia belangeri ENSTBEG00000004803 ortholog_one2one 2 retrogenes
retro_tbel_2480, retro_tbel_2875,
Xenopus tropicalis ENSXETG00000013435 ortholog_one2one 1 retrogene
retro_xtro_60,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2988 93.06 94.57
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Download FASTA sequences of all ENSCJAG00000007927 retrocopies