Parental gene:

POLD2, ENSCJAG00000007954

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:8:11624750..11633269(-)


>ENSCJAG00000007954
ATGTTTTCTGAGCAGGCTGCCCAGAGGGCCAACACTCTGCTGTCTCCACCATCAGCCAACAATGCCACCTTTGCTCGGGT
GTCAGTGGCAACCTACACCAACTCCTCACAACCCTTCCGGCTAGGAGAGCGCAGCTTTAACCGGCAGTATGCCCACATTT
ATGCGACCCGCCTCATCCAAATGAGACCCTTCCTGGAGAACCGGGCCCAGCAGCGCTGGGGCAGTGGAGTGGGAGTGAAG
AAGCTATGTGAGCTGCAGCCTGGGGAGAAGTGCTGTGTGGTGGGCACTCTGTTCAAAGCCATGCCGCTGCAGCCCTCCAT
CCTGCGGGAGATCAGCGAGGAGCACAACCTGCTACCCCAGCCTTCTCGGAGCAAATACATCCACCCAGATGACGAGCTGG
TTTTGGAAGATGAACTGCAGCGTATCAAACTAAAAGGCACTATTGATGTGTCAAAGTTGGTTACAGGGACTGTCCTGGCC
GTGTTTGGCTCCGTGAGAGACGACGGGAAGTTTCTGGTCGAGGACCATTGCTTTGCTGACCTCGCTCCCCAGAAGCCCGC
ACCCCCTCTTGACATCGATAGGTTCGTGCTGCTGGTGTCCGGCCTGGGCTTGGGTGGAGGTGGAGGCGAGAGCCTGCTGG
GCACCCAGCTGCTGGTGGATGTGGTGACAGGGCAGCTTGGGGATGAAGGGGAGCAGTGCAGTGCTGCCCACGTCTCCCGG
GTCATCCTCGCTGGCAACCTTCTCAGCCACAGCACCCAGAGCAGAGATTCTATCAACAAGGCCAAGTACCTCACTAAGAA
AACCCAGGCAGCCAGCGTGGAAGCTGTGAAGATGCTGGATGAGATCCTCCTGCAGCTGAGTGCCTCAGTGCCCGTGGATG
TGATGCCAGGCGAGTTTGATCCCACGAACTACACACTCCCGCAGCAGCCCCTCCACCCCTGCATGTTCCCGCTGGCCACT
GCCTACTCCACACTCCAACTGGTCACCAACCCCTACCAGGCCACCATTGATGGAGTCAGATTCCTGGGGACTTCGGGACA
GAACGTGAGTGACATTTTCCGATACAGCAGCATGGAGGATCACTTAGAGATCCTGGAGTGGACCCTCCGGGTCCGTCACA
TCAGCCCCACAGCCCCTGACACACTAGGTTGTTACCCATTCTACAAAACCGACCCATTCATCTTCGCAGAGTGCCCACAT
GTCTACTTTTGTGGCAGCACCCCCAGCTTTGGCTCCAAAGTCATCCGAGGTCCTGAGGACCAGAAAGTGCTGTTGGTGAC
TGTCCCTGACTTCAGTGCCACGCAGACCGCCTGCCTCGTGAACCTGCGCAGCCTGGCCTGCCAGCCCATCAGCTTCTCAG
GCTTCGGGGCAGAGGATGATGACCTGGGAGGCCTGGGGCTGGGCCCCTGA

Library Parental gene expression (RPM)
SRP051959_colon 16 .62 RPM
SRP051959_heart 28 .98 RPM
SRP051959_kidney 22 .79 RPM
SRP051959_liver 12 .39 RPM
SRP051959_lung 15 .50 RPM
SRP051959_lymph_node 16 .39 RPM
SRP051959_skeletal_muscle 31 .01 RPM
SRP051959_spleen 14 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000002933 ortholog_one2one 1 retrogene
retro_cfam_1870,
Erinaceus europaeus ENSEEUG00000006258 ortholog_one2one 1 retrogene
retro_eeur_303,
Homo sapiens ENSG00000106628 ortholog_one2one 1 retrogene
retro_hsap_3217,
Gorilla gorilla ENSGGOG00000004424 ortholog_one2one 2 retrogenes
retro_ggor_2183, retro_ggor_2184,
Pongo abelii ENSPPYG00000017597 ortholog_one2one 1 retrogene
retro_pabe_2665,
Pan troglodytes ENSPTRG00000019138 ortholog_one2one 1 retrogene
retro_ptro_2236,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_700 92.05 77.61
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Download FASTA sequences of all ENSCJAG00000007954 retrocopies