Parental gene: | C18orf25, ENSCJAG00000008285 |
| Aliases: | None |
| Description: | chromosome 18 open reading frame 25 [Source:HGNC Symbol;Acc:28172] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 13:83902428..83995762(+) |
>ENSCJAG00000008285
ATGAAGATGGAGGAGGCAGTAGGAAAAGTTGAAGAACTCATTGAGTCCGAAGCCCTACCAAAAACGTCCGAACAAGAGAC
AGCCAAGGAGGAAGATGGATCTGTAGAACTGGAATCTCAAGTTCAGAAAGATGGTGTAGCAGAGTCTACTGTTATTTCTT
CAATGCCCTGCTTGTTGATGGAACTGAGAAGGGACTCTTCTGAGTCTCAGTTAGCATCCACAGAGAGTGACAAGCCTACA
ACTGGCCGAGTTTATGAGAGTGACTCCTCTAATCACTGCATGCTTTCCCCTTCCTCTAGTGGTCACCTGGCTGATTCAGA
TACGTTGTCTTCTGCAGAAGAGAATGAACCCTCTCAGGCAGAAACAGCAGTAGAAGGAGACCCTTCAGGAGTATCTGGTG
CCACAGTTGGGCGCAAGTCTAGGCGGTCCCGATCTGAAAGTGAAACATCCACTATGGCTGCCAAGAAAAACCGGCAATCA
AGTGATAAACAGAATGGCCGAGTCGCCAAGGTTAAAGGTCATCGGAGCCAAAAGCACAAGGAGAGGATCAGGTTACTGAG
GCAGAAACGGGAGGCTGCTGCAAGGAAGAAATACAACCTGCTGCAGGACAGTAGTACCAGTGATAGTGACCTGACTTGTG
ACTCAAGCACGAGCTCATCAGATGATGATGAAGAGGTTTCAGGGAGCAGCAAGACAATCACTGCAGAGATACCAGATGGA
CCTCCAGTTGTAGCTCATTATGATATGTCTGACACCAGCTCTGACCCAGAAGTGGTAAATGTGGACAATTTATTGGCGGC
TGCAGTAGTTCAAGAACACAATAATTCTGTAGGCGGCCAGGACACAGGAGCTACCTGGAGGACCAGCGGGCTTCTAGAGG
AGCTGAATGCAGAGGCAGGTCATTTGGATCCAGGATTCCTAGCAAGTGACAAAACATCTGCTGGAAATGCACCACTTAAT
GAAGAAATTAATATTGCCTCTTCAGATAGTGAAGTAGAGATCGTGGGAGTTCAGGAACATGCAAGGTGTGTTCATCCTCG
AGGTGGTGTGATTCAGAGTGTTTCTTCATGGAAGCATGGCTCGGGCACACAGTATGTTAGCACCAGGCAAACACAGTCAT
GGACTGCTGTGACTCCCCAGCAGACTTGGGCTTCACCAGCAGAAGTTGTTGACCTTACCTTGGATGAGGATAGCAGGCGT
AAATACCTACTGTAA
ATGAAGATGGAGGAGGCAGTAGGAAAAGTTGAAGAACTCATTGAGTCCGAAGCCCTACCAAAAACGTCCGAACAAGAGAC
AGCCAAGGAGGAAGATGGATCTGTAGAACTGGAATCTCAAGTTCAGAAAGATGGTGTAGCAGAGTCTACTGTTATTTCTT
CAATGCCCTGCTTGTTGATGGAACTGAGAAGGGACTCTTCTGAGTCTCAGTTAGCATCCACAGAGAGTGACAAGCCTACA
ACTGGCCGAGTTTATGAGAGTGACTCCTCTAATCACTGCATGCTTTCCCCTTCCTCTAGTGGTCACCTGGCTGATTCAGA
TACGTTGTCTTCTGCAGAAGAGAATGAACCCTCTCAGGCAGAAACAGCAGTAGAAGGAGACCCTTCAGGAGTATCTGGTG
CCACAGTTGGGCGCAAGTCTAGGCGGTCCCGATCTGAAAGTGAAACATCCACTATGGCTGCCAAGAAAAACCGGCAATCA
AGTGATAAACAGAATGGCCGAGTCGCCAAGGTTAAAGGTCATCGGAGCCAAAAGCACAAGGAGAGGATCAGGTTACTGAG
GCAGAAACGGGAGGCTGCTGCAAGGAAGAAATACAACCTGCTGCAGGACAGTAGTACCAGTGATAGTGACCTGACTTGTG
ACTCAAGCACGAGCTCATCAGATGATGATGAAGAGGTTTCAGGGAGCAGCAAGACAATCACTGCAGAGATACCAGATGGA
CCTCCAGTTGTAGCTCATTATGATATGTCTGACACCAGCTCTGACCCAGAAGTGGTAAATGTGGACAATTTATTGGCGGC
TGCAGTAGTTCAAGAACACAATAATTCTGTAGGCGGCCAGGACACAGGAGCTACCTGGAGGACCAGCGGGCTTCTAGAGG
AGCTGAATGCAGAGGCAGGTCATTTGGATCCAGGATTCCTAGCAAGTGACAAAACATCTGCTGGAAATGCACCACTTAAT
GAAGAAATTAATATTGCCTCTTCAGATAGTGAAGTAGAGATCGTGGGAGTTCAGGAACATGCAAGGTGTGTTCATCCTCG
AGGTGGTGTGATTCAGAGTGTTTCTTCATGGAAGCATGGCTCGGGCACACAGTATGTTAGCACCAGGCAAACACAGTCAT
GGACTGCTGTGACTCCCCAGCAGACTTGGGCTTCACCAGCAGAAGTTGTTGACCTTACCTTGGATGAGGATAGCAGGCGT
AAATACCTACTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 10 .67 RPM |
| SRP051959_skeletal_muscle | 13 .50 RPM |
| SRP051959_lymph_node | 10 .50 RPM |
| SRP051959_lung | 10 .90 RPM |
| SRP051959_liver | 6 .28 RPM |
| SRP051959_kidney | 10 .03 RPM |
| SRP051959_heart | 16 .35 RPM |
| SRP051959_colon | 9 .96 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000152242 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000011473 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011251 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2748 | 77.15 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000008285 retrocopies