Parental gene: | PTPLA, ENSCJAG00000008663 |
| Aliases: | None |
| Description: | protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A [Source:HGNC Symbol;Acc:9639] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:15415594..15441102(-) |
>ENSCJAG00000008663
CGGCACATGGGGCGCCTGACTGAGGCGGCGGAAGCGGGCAGCGGCGCTCAGGCTGCGCGCTGGGCAGGGCCCCCTCCCAC
GCTCCTGCCGCTCTCTCCCACGTCCCCCGGGTGCGCGGCCACCATGGCGTCCAGCGACGAGGACGGCACCAACGGCGGCA
CCTCGGAGGCCGGCGAGGACCGGGAGGCCCCCGGAAAGCGGAGGCGCCTGGGCTGGTTGGCCACCACCTGGCTCACCTTC
TACAACATCGCCATGACTGCGGGGTGGTTGGTTCTAGCTATTGCCATGGTACGCTTTTATATGGAAAAAGGAACACACAG
AGGTTTATATAAAAGTATTCAGAAGACCCTTAAATTTTTCCAGACATTTGCCTTGCTTGAGATAATTCACTGTTTAATTG
GAATTGTACCTACTTCTGTGCTTGTGACTGGGGTCCAAGTGAGTTCAAGAATCTTTATGGTGTGGCTCATTACTCACAGT
ATAAAACCAATCCAGAATGAGGAGAGTGTGGTGCTTTTTCTGGTGGCGTGGACGGTGACAGAGATCACTCGCTATTCCTT
CTACACATTCAGCCTTCTTGATCACTTGCCATACTTCATTAAATGGGCCAGATACAATTTTTTTATCATCTTATATCCTG
TCGGAGTTGCTGGGGAACTTCTTACAATATATGCCGCCTTGCCGTATGTGAAGAAAACGGGAATGTTTTCAATAAGACTC
CCTAACAAATACAATGTCTCTTTTGACTACTATTATTTTCTCCTTATAACTATGGCCTCATATATACCATTGTTTCCACA
ACTCTATTTTCATATGTTACGTCAAAGAAGAAAGGTGCTTCATGGAGAGGTGATTGTAGAAAAGGATGATTAA
CGGCACATGGGGCGCCTGACTGAGGCGGCGGAAGCGGGCAGCGGCGCTCAGGCTGCGCGCTGGGCAGGGCCCCCTCCCAC
GCTCCTGCCGCTCTCTCCCACGTCCCCCGGGTGCGCGGCCACCATGGCGTCCAGCGACGAGGACGGCACCAACGGCGGCA
CCTCGGAGGCCGGCGAGGACCGGGAGGCCCCCGGAAAGCGGAGGCGCCTGGGCTGGTTGGCCACCACCTGGCTCACCTTC
TACAACATCGCCATGACTGCGGGGTGGTTGGTTCTAGCTATTGCCATGGTACGCTTTTATATGGAAAAAGGAACACACAG
AGGTTTATATAAAAGTATTCAGAAGACCCTTAAATTTTTCCAGACATTTGCCTTGCTTGAGATAATTCACTGTTTAATTG
GAATTGTACCTACTTCTGTGCTTGTGACTGGGGTCCAAGTGAGTTCAAGAATCTTTATGGTGTGGCTCATTACTCACAGT
ATAAAACCAATCCAGAATGAGGAGAGTGTGGTGCTTTTTCTGGTGGCGTGGACGGTGACAGAGATCACTCGCTATTCCTT
CTACACATTCAGCCTTCTTGATCACTTGCCATACTTCATTAAATGGGCCAGATACAATTTTTTTATCATCTTATATCCTG
TCGGAGTTGCTGGGGAACTTCTTACAATATATGCCGCCTTGCCGTATGTGAAGAAAACGGGAATGTTTTCAATAAGACTC
CCTAACAAATACAATGTCTCTTTTGACTACTATTATTTTCTCCTTATAACTATGGCCTCATATATACCATTGTTTCCACA
ACTCTATTTTCATATGTTACGTCAAAGAAGAAAGGTGCTTCATGGAGAGGTGATTGTAGAAAAGGATGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 2 .42 RPM |
| SRP051959_skeletal_muscle | 6 .66 RPM |
| SRP051959_lymph_node | 1 .07 RPM |
| SRP051959_lung | 2 .78 RPM |
| SRP051959_liver | 3 .12 RPM |
| SRP051959_kidney | 2 .33 RPM |
| SRP051959_heart | 13 .45 RPM |
| SRP051959_colon | 1 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Mus musculus | ENSMUSG00000063275 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_266 | 61.32 | 83.45 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000008663 retrocopies