Parental gene: | POLR3E, ENSCJAG00000008918 |
| Aliases: | None |
| Description: | polymerase (RNA) III (DNA directed) polypeptide E (80kD) [Source:HGNC Symbol;Acc:30347] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 12:21125818..21160939(+) |
>ENSCJAG00000008918
ATGGCCAATGAAGAGGATGACCCAGTCATACAGGAGATCGATGTGTACTTGGCCAAGAGTCTGGCAGAAAAGCTGTATCT
GTTTCAGTATCCTGTGCGTCCAGCCTCGATGACCTACGATGACATTCCACACCTCTCAGCCAAGATCAAGCCCAAGCAGC
AGAAGGTAGAGCTTGAGATGGCCATCGACACCCTGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGATTGCGCTGAAT
GTGGATGGGGCCTGCGCAGATGAGACCAGCACGTACTCCTCGAAGCTGATGGACAAGCAGACATTCTGCTCTTCCCAGAC
CACCAGTAACACATCCCGTTACGCCGCTGCACTCTACAGGCAAGGTGAGCTCCACCTGACACCTTTACATGGCATCCTGC
AGCTGCGGCCCAGCTTCTCCTACCTGGATAAGGCGGACGCCAAGCACCGGGAGAGGGAGGCAGCCAACGAGGCAGGGGAC
TCTTCACAGGATGAGGCGGAAGACGATGTTAAGCAGATCACGGTGCGGTTCTCCCGGCCCGAGTCAGAGCAGGCCCGCCA
GCGCCGCGTGCAGTCCTATGAGTTCCTGCAGAAGAAGCATGCGGAAGAGGCCTGGGTACACCTGCATTACTATGGCCTGA
AGGACAGCCGCTCTGAGCACGAGCGCCAGTACCTGCTATGCCCAGGCTCGAGTGGGGTGGAGAACACAGAGCTTGTCAAG
TCACCCAGTGAGTACCTGTTGATGCTGATGCCGCCCAGCCAGGAGGAGGAGAAAGATAAGCCTGTGGCCCCCAGCAATGT
CCTGTCCATGGCCCAGCTGCGCACGCTGCCCCTGGCTGATCAGATCAAGATCCTGATGAAGAACGTGAAGGTCATGCCTT
TTGCCAACTTGATGAGCCTCCTGGGCCCCTCCATCGATTCCGTGGCTGTTCTGCGGGGCATCCAGAAGGTGGCGATGTTG
GTCCAAGGGAACTGGGTGGTGAAGAGTGACATCCTGTACCCCAAGGACTCATCCAGCCCTCACAGCGGTGTGCCTGCCGA
GGTGCTCTGCAGGGGCCGAGACTTCGTTATGTGGAAGTTCACGCAGAGCCGCTGGGTGGTTAGGAAGGAGGTGGCAACAG
TGACCAAACTCTGCACCGAGGACGTGAAGGACTTCCTGGAGCACATGGCTGTGGTGAGGATCAACAAAGGCTGGGAGTTC
ATTCTGCCTTATGACGGGGAGTTCATCAAAAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGGTATCCA
GGCCAAATTGGAAAAAATAAAGGAAACCATGCCAAAGAAGCTGGATGCACAATCAGGGCCTGCCGGGCTGGTCTCTGGGG
ACCAGCGTATCCAAGTAGCCAAAACCAAGGCCCAGCAGAACCATGCGTTGCTGGAGCGGGAGCTGCAGTGGCGGAAGGAG
CAGCTGCGGGCGCCTGCGGTCCCTCCTGGTGTGCGGATCAAGGAGGAGCCAGTGAGCGAGGAGGGCGAGGACGACGATGA
CGAGGAGGAGGAGCCCATGGAAACTTCCCCCAGTGGTGGCGTCCACAGCAGGCTGGCCAATGGGCTGCCTCCCGGGCGGG
CTGCAGGCACGGACAGCTTCAACGGGCATCTACCCCCGGGCTGTGCTAGCACCCCCATGGCCCGGGAACTGAGGGCCTTT
GTGGAGGCCACCTTTCAGAGACAGTTTGTGCTCACGCTGAGCGAACTCAAGCGCCTCTTCAACCTGCACTTGGCCAGCCT
GCCCCCTGGCCACACGCTCTTCAGCGGCATCTCGGACCGCATGCTGCAGGACACGGTGCTGGCCGCTGGTTGCAAGCAGA
TACTGGTGCCTTTTCCCCCACAGACTGCTGCTTCCCCGGATGAGCAGAAAGTGTTTGCCCTCTGGGAGTCTGGAGATATG
AGCGATCAGCATCGACAGGTTTTGCTTGAAATTTTTTCCAAAAATTACCGAGTACGCCGAAACATGATCCAGTCTCGGTT
GACTCAAGAGTGTGGAGAAGATCTCAGTAAACAGGAGGTGGATAAAGTCCTGAAGGACTGCTGTGTAAGCTATGGTGGCA
TGTGGTACCTTAAAGGGACAGTACAGTCTTGA
ATGGCCAATGAAGAGGATGACCCAGTCATACAGGAGATCGATGTGTACTTGGCCAAGAGTCTGGCAGAAAAGCTGTATCT
GTTTCAGTATCCTGTGCGTCCAGCCTCGATGACCTACGATGACATTCCACACCTCTCAGCCAAGATCAAGCCCAAGCAGC
AGAAGGTAGAGCTTGAGATGGCCATCGACACCCTGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGATTGCGCTGAAT
GTGGATGGGGCCTGCGCAGATGAGACCAGCACGTACTCCTCGAAGCTGATGGACAAGCAGACATTCTGCTCTTCCCAGAC
CACCAGTAACACATCCCGTTACGCCGCTGCACTCTACAGGCAAGGTGAGCTCCACCTGACACCTTTACATGGCATCCTGC
AGCTGCGGCCCAGCTTCTCCTACCTGGATAAGGCGGACGCCAAGCACCGGGAGAGGGAGGCAGCCAACGAGGCAGGGGAC
TCTTCACAGGATGAGGCGGAAGACGATGTTAAGCAGATCACGGTGCGGTTCTCCCGGCCCGAGTCAGAGCAGGCCCGCCA
GCGCCGCGTGCAGTCCTATGAGTTCCTGCAGAAGAAGCATGCGGAAGAGGCCTGGGTACACCTGCATTACTATGGCCTGA
AGGACAGCCGCTCTGAGCACGAGCGCCAGTACCTGCTATGCCCAGGCTCGAGTGGGGTGGAGAACACAGAGCTTGTCAAG
TCACCCAGTGAGTACCTGTTGATGCTGATGCCGCCCAGCCAGGAGGAGGAGAAAGATAAGCCTGTGGCCCCCAGCAATGT
CCTGTCCATGGCCCAGCTGCGCACGCTGCCCCTGGCTGATCAGATCAAGATCCTGATGAAGAACGTGAAGGTCATGCCTT
TTGCCAACTTGATGAGCCTCCTGGGCCCCTCCATCGATTCCGTGGCTGTTCTGCGGGGCATCCAGAAGGTGGCGATGTTG
GTCCAAGGGAACTGGGTGGTGAAGAGTGACATCCTGTACCCCAAGGACTCATCCAGCCCTCACAGCGGTGTGCCTGCCGA
GGTGCTCTGCAGGGGCCGAGACTTCGTTATGTGGAAGTTCACGCAGAGCCGCTGGGTGGTTAGGAAGGAGGTGGCAACAG
TGACCAAACTCTGCACCGAGGACGTGAAGGACTTCCTGGAGCACATGGCTGTGGTGAGGATCAACAAAGGCTGGGAGTTC
ATTCTGCCTTATGACGGGGAGTTCATCAAAAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGGTATCCA
GGCCAAATTGGAAAAAATAAAGGAAACCATGCCAAAGAAGCTGGATGCACAATCAGGGCCTGCCGGGCTGGTCTCTGGGG
ACCAGCGTATCCAAGTAGCCAAAACCAAGGCCCAGCAGAACCATGCGTTGCTGGAGCGGGAGCTGCAGTGGCGGAAGGAG
CAGCTGCGGGCGCCTGCGGTCCCTCCTGGTGTGCGGATCAAGGAGGAGCCAGTGAGCGAGGAGGGCGAGGACGACGATGA
CGAGGAGGAGGAGCCCATGGAAACTTCCCCCAGTGGTGGCGTCCACAGCAGGCTGGCCAATGGGCTGCCTCCCGGGCGGG
CTGCAGGCACGGACAGCTTCAACGGGCATCTACCCCCGGGCTGTGCTAGCACCCCCATGGCCCGGGAACTGAGGGCCTTT
GTGGAGGCCACCTTTCAGAGACAGTTTGTGCTCACGCTGAGCGAACTCAAGCGCCTCTTCAACCTGCACTTGGCCAGCCT
GCCCCCTGGCCACACGCTCTTCAGCGGCATCTCGGACCGCATGCTGCAGGACACGGTGCTGGCCGCTGGTTGCAAGCAGA
TACTGGTGCCTTTTCCCCCACAGACTGCTGCTTCCCCGGATGAGCAGAAAGTGTTTGCCCTCTGGGAGTCTGGAGATATG
AGCGATCAGCATCGACAGGTTTTGCTTGAAATTTTTTCCAAAAATTACCGAGTACGCCGAAACATGATCCAGTCTCGGTT
GACTCAAGAGTGTGGAGAAGATCTCAGTAAACAGGAGGTGGATAAAGTCCTGAAGGACTGCTGTGTAAGCTATGGTGGCA
TGTGGTACCTTAAAGGGACAGTACAGTCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 11 .58 RPM |
| SRP051959_skeletal_muscle | 18 .15 RPM |
| SRP051959_lymph_node | 16 .69 RPM |
| SRP051959_lung | 13 .40 RPM |
| SRP051959_liver | 7 .84 RPM |
| SRP051959_kidney | 11 .80 RPM |
| SRP051959_heart | 11 .16 RPM |
| SRP051959_colon | 9 .87 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000015801 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3734 | 87.44 | 62.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3885 | 83.75 | 90.04 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000008918 retrocopies