Parental gene: | GPN3, ENSCJAG00000009339 |
| Aliases: | None |
| Description: | GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:30186] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 9:100599672..100619102(-) |
>ENSCJAG00000009339
ATGCCTCGGTATGCGCAGCTGGTCATGGGCCCCGCTGGCAGCGGGAAGAGTACCTACTGTGCCACCATGGTCCAGCACTG
TGAAGCCCTCAACCGCTCTGTTCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAACTACTCCGTGATGGCTGACA
TTCGGGAACTGATTGAGGTGGATGATGTAATGGAGGATGATTCTCTGAGATTTGGTCCCAATGGAGGATTGGTATTTTGC
ATGGAGTACTTTGCCAATAATTTTGACTGGCTAGAGAACTGTCTTGGCCATGTAGAAGATGACTATATCCTTTTTGATTG
CCCAGGTCAGATTGAGTTGTACACTCACCTGCCTGTGATGAAACAGCTGGTCCAGCAGCTCGAGCAGTGGGAATTCCGAG
TCTGTGGAGTTTTTCTTGTTGATTCTCAGTTCATGGTGGAGTCATTCAAGTTTATTTCTGGCATCTTGGCAGCCCTGAGT
GCCATGGTCTCTCTAGAAATTCCACAGGTCAACATCATGACAAAAATGGATCTGCTGAGTAAAAAAGCTAAAAAGGAAAT
TGAGAAGTTTTTAGATCCAGACATGTATTCTTTATTAGAAGATTCTACAAGTGACTTAAGAAGCAAAAAATTCAAGAAAC
TGACTAAAGCTATATGTGGACTGATTGATGACTACAGCATGGTTCGATTTTTACCTTACGATCAGTCAGATGAAGAAAGT
ATGAACATTGTGTTACAGCATATTGATTTTGCCATTCAGTACGGAGAAGACCTGGAATTTAAAGAACCAAAGGAACGTGA
AGATGAGTCTTCTATGTTTGACGAATATTTTCAAGAATGCCAGGGTGAATGA
ATGCCTCGGTATGCGCAGCTGGTCATGGGCCCCGCTGGCAGCGGGAAGAGTACCTACTGTGCCACCATGGTCCAGCACTG
TGAAGCCCTCAACCGCTCTGTTCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAACTACTCCGTGATGGCTGACA
TTCGGGAACTGATTGAGGTGGATGATGTAATGGAGGATGATTCTCTGAGATTTGGTCCCAATGGAGGATTGGTATTTTGC
ATGGAGTACTTTGCCAATAATTTTGACTGGCTAGAGAACTGTCTTGGCCATGTAGAAGATGACTATATCCTTTTTGATTG
CCCAGGTCAGATTGAGTTGTACACTCACCTGCCTGTGATGAAACAGCTGGTCCAGCAGCTCGAGCAGTGGGAATTCCGAG
TCTGTGGAGTTTTTCTTGTTGATTCTCAGTTCATGGTGGAGTCATTCAAGTTTATTTCTGGCATCTTGGCAGCCCTGAGT
GCCATGGTCTCTCTAGAAATTCCACAGGTCAACATCATGACAAAAATGGATCTGCTGAGTAAAAAAGCTAAAAAGGAAAT
TGAGAAGTTTTTAGATCCAGACATGTATTCTTTATTAGAAGATTCTACAAGTGACTTAAGAAGCAAAAAATTCAAGAAAC
TGACTAAAGCTATATGTGGACTGATTGATGACTACAGCATGGTTCGATTTTTACCTTACGATCAGTCAGATGAAGAAAGT
ATGAACATTGTGTTACAGCATATTGATTTTGCCATTCAGTACGGAGAAGACCTGGAATTTAAAGAACCAAAGGAACGTGA
AGATGAGTCTTCTATGTTTGACGAATATTTTCAAGAATGCCAGGGTGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 7 .56 RPM |
| SRP051959_skeletal_muscle | 13 .85 RPM |
| SRP051959_lymph_node | 7 .83 RPM |
| SRP051959_lung | 6 .65 RPM |
| SRP051959_liver | 11 .85 RPM |
| SRP051959_kidney | 11 .45 RPM |
| SRP051959_heart | 10 .24 RPM |
| SRP051959_colon | 5 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000016646 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000111231 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001697 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015510 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006494 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002831 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2969 | 64.84 | 63.25 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000009339 retrocopies