Parental gene: | TRNAU1AP, ENSCJAG00000009717 |
| Aliases: | None |
| Description: | tRNA selenocysteine 1 associated protein 1 [Source:HGNC Symbol;Acc:30813] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:62741176..62771024(+) |
>ENSCJAG00000009717
ATGGCGGCCAGCCTGTGGATGGGCGACCTGGAACCCTATATGGATGAGAACTTCATCTCCAGAGCTTTCGCCACCATGGG
GGAGACTGTAATGAGCGTCAAAATTATCCGAAACCGCCTCACCGGGATCCCAGCTGGCTACTGCTTTGTAGAATTCGCAG
ATTTGGCCACAGCTGAGAAGTGTTTGCATAAAATTAATGGGAAACCCCTTCCAGGAGCCACACCTGCGAAACGTTTTAAA
CTGAACTATGCCACTTATGGGAAACAACCAGATAACAGCCCTGAGTATTCCCTCTTTGTGGGGGACCTGACCCCAGACGT
GGATGATGGCATGCTGTATGAATTCTTCGTCAAAGTCTATCCCTCCTGTCGGGGAGGCAAGGTGGTTTTGGACCAGACAG
GCGTGTCTAAGGGTTATGGTTTTGTGAAATTCACAGATGAACTGGAACAGAAACGGGCCCTGACGGAGTGCCAGGGAGCA
GTGGGACTGGGGTCTAAACCTGTGCGGCTGAGCGTGGCAATCCCTAAAGCGAGCCGTGTAAAGCCAGTGGAATATAGTCA
GATGTACAGTTACAGCTACAACCAGTATTACCAGCAGTACCAGAACTACTATGCTCAGTGGGGCTATGACCAGAACACAG
GCAGCTATAGCTACAGTTACCCCCAGTATGGCTATACTCAGAGCACCATGCAGACATATGAAGAAGTTGGAGATGATGCA
TTGGAAGACCCCATGCCACAGCTGGATGTGACTGAGGCCAACAAGGAGTTCATGGAACAGAGTGAGGAGCTGTATGATGC
TCTGATGGACTGTCACTGGCAGCCCCTGGACACAGTGTCTTCAGAGATCCCTGCCATGATGTAG
ATGGCGGCCAGCCTGTGGATGGGCGACCTGGAACCCTATATGGATGAGAACTTCATCTCCAGAGCTTTCGCCACCATGGG
GGAGACTGTAATGAGCGTCAAAATTATCCGAAACCGCCTCACCGGGATCCCAGCTGGCTACTGCTTTGTAGAATTCGCAG
ATTTGGCCACAGCTGAGAAGTGTTTGCATAAAATTAATGGGAAACCCCTTCCAGGAGCCACACCTGCGAAACGTTTTAAA
CTGAACTATGCCACTTATGGGAAACAACCAGATAACAGCCCTGAGTATTCCCTCTTTGTGGGGGACCTGACCCCAGACGT
GGATGATGGCATGCTGTATGAATTCTTCGTCAAAGTCTATCCCTCCTGTCGGGGAGGCAAGGTGGTTTTGGACCAGACAG
GCGTGTCTAAGGGTTATGGTTTTGTGAAATTCACAGATGAACTGGAACAGAAACGGGCCCTGACGGAGTGCCAGGGAGCA
GTGGGACTGGGGTCTAAACCTGTGCGGCTGAGCGTGGCAATCCCTAAAGCGAGCCGTGTAAAGCCAGTGGAATATAGTCA
GATGTACAGTTACAGCTACAACCAGTATTACCAGCAGTACCAGAACTACTATGCTCAGTGGGGCTATGACCAGAACACAG
GCAGCTATAGCTACAGTTACCCCCAGTATGGCTATACTCAGAGCACCATGCAGACATATGAAGAAGTTGGAGATGATGCA
TTGGAAGACCCCATGCCACAGCTGGATGTGACTGAGGCCAACAAGGAGTTCATGGAACAGAGTGAGGAGCTGTATGATGC
TCTGATGGACTGTCACTGGCAGCCCCTGGACACAGTGTCTTCAGAGATCCCTGCCATGATGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 4 .77 RPM |
| SRP051959_skeletal_muscle | 5 .68 RPM |
| SRP051959_lymph_node | 5 .91 RPM |
| SRP051959_lung | 5 .11 RPM |
| SRP051959_liver | 3 .90 RPM |
| SRP051959_kidney | 4 .13 RPM |
| SRP051959_heart | 4 .40 RPM |
| SRP051959_colon | 5 .70 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011367 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000012980 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015511 | ortholog_one2one | 2 retrogenes | |
| Pelodiscus sinensis | ENSPSIG00000006864 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000008049 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3928 | 92.06 | 65.85 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000009717 retrocopies