Parental gene:

SLC39A1, ENSCJAG00000010006

Aliases:None
Description:solute carrier family 39 (zinc transporter), member 1 [Source:HGNC Symbol;Acc:12876]
Organism:Marmoset (Callithrix jacchus)
Coordinates:18:7909724..7919211(-)


>ENSCJAG00000010006
ATGGGGCCCTGGGGAGAGCCCGAACTCCTGGTGTGGCGCCCAGAGGCAGTAGCTTCAGAGCCTCCAGTGCTTGTGGGGCT
GGAGGTGAAGTTGGGGGCCCTGGTGCTGCTGCTGGTGCTCACACTTCTCTGCAGCCTGGTGCCCATCTGTGTGCTGCGCA
GGCCAGGAGCTAACCATGAAGCCTCAGCTTCCCGCCAGAAAGCCCTAAGCCTAGTAAGCTGTTTTGCGGGTGGCGTCTTT
TTGGCCACCTGTCTCCTGGACCTGCTGCCTGACTACCTGGCTGCTATAGATGAGGCCCTGGCAGCCTTGCATGTAACGCT
CCAGTTCCCGCTGCAAGAGTTCATCCTGGCCATGGGCTTCTTCCTGGTCCTGGTGATGGAGCAGATCACACTGGCTTACA
AGGAGCAGTCAGGGCCGCCACCTCTGGAGGAAACAAGGGCTCTGCTGGGAACAGTGAACGGTGGGCCACAGCTTTGGCAT
GATGGGCCAGGGGTTCCACAGGCGAGTGGAGCCCCAGCAACCCCCTCAGCCTTGCGTGCCTGTGTACTGGTCTTCTCCCT
GGCCCTCCACTCTGTGTTCGAGGGGCTGGCAGTAGGGCTGCAGCGAGACCGGGCTCGGGCCATGGAGCTGTGCCTGGCTT
TGCTGCTCCATAAGGGGATCCTGGCTGTCAGTCTGTCCCTCCGGCTGCTGCAGAGCCACCTTAGGGCACAGGTGGTGGCT
GGCTGTGGGATTCTCTTCTCATGCATGACACCTCTAGGCATCGGGCTGGGTGCAGCTCTGGCAGAGTCAGCAGGACCTCT
GCACCAGCTGGCCCAGTCTGTGCTAGAGGGCATGGCGGCTGGCACCTTTCTCTATATCACCTTTCTGGAAATCCTGCCCC
AGGAGCTGGCCAGTTCTGAGCAAAGGATCCTCAAGGTCATTCTGCTCCTAGCAGGCTTTGCTCTGCTCACTGGCCTGCTC
TTCATCCAAATCTAG

Library Parental gene expression (RPM)
SRP051959_colon 23 .14 RPM
SRP051959_heart 17 .91 RPM
SRP051959_kidney 23 .96 RPM
SRP051959_liver 21 .53 RPM
SRP051959_lung 21 .96 RPM
SRP051959_lymph_node 12 .78 RPM
SRP051959_skeletal_muscle 9 .35 RPM
SRP051959_spleen 19 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Macropus eugenii ENSMEUG00000006754 ortholog_one2one 1 retrogene
retro_meug_1551,
Microcebus murinus ENSMICG00000010310 ortholog_one2one 1 retrogene
retro_mmur_162,
Myotis lucifugus ENSMLUG00000013282 ortholog_one2one 1 retrogene
retro_mluc_2366,
Macaca mulatta ENSMMUG00000005007 ortholog_one2many 1 retrogene
retro_mmul_28,
Mus musculus ENSMUSG00000052310 ortholog_one2one 1 retrogene
retro_mmus_1899,
Oryctolagus cuniculus ENSOCUG00000003045 ortholog_one2many 1 retrogene
retro_ocun_1792,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1476 86.20 100.00
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Download FASTA sequences of all ENSCJAG00000010006 retrocopies