Parental gene: | TEAD1, ENSCJAG00000010263 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 11:76227710..76502505(+) |
>ENSCJAG00000010263
ATGGAAAGGATGAGCGACTCTGCAGATAAGCCAATTGACAATGATGCAGAAGGGGTCTGGAGCCCCGACATTGAACAGAG
CTTTCAGGAGGCCCTGGCTATCTATCCGCCATGTGGGAGGAGGAAAATCATCTTATCAGACGAAGGCAAAATGTATGGTA
GGAATGAATTGATAGCCAGATACATCAAACTCAGGACAGGCAAGACGAGGACCAGAAAACAGGTGTCTAGTCACATTCAG
GTTCTTGCCAGAAGGAAATCTCGTGATTTTCATTCCAAGCTAAAGGATCAGACTGCAAAGGATAAGGCCCTGCAGCACAT
GGCGGCCATGTCCTCAGCCCAAATCGTTTCGGCCACTGCCATTCACAACAAGCTGGGGCTGCCTGGGATTCCACGCCCGA
CCTTCCCAGGGGCGCCGGGGTTCTGGCCAGGAATGATACAAACAGGGCAGCCAGGATCCTCACAAGACGTCAAGCCTTTT
GTGCAGCAGGCCTACCCCATCCAGCCAGCGGTCACAGCCCCCATTCCAGGTTTTGAGCCTGCATCAGCCCCAGCTCCCTC
GGTCCCTGCCTGGCAAGGTCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGGAATTTTCAGCTTTTCTTGAACAGCAAC
GAGACCCAGACTCGTACAACAAACACCTCTTCGTGCACATTGGGCATGCCAACCATTCTTACAGTGACCCATTGCTTGAA
TCAGTGGACATTCGTCAGATTTATGACAAATTTCCTGAAAAGAAAGGTGGCTTAAAGGAACTGTTTGGAAAGGGCCCTCA
AAATGCCTTCTTCCTCGTAAAATTCTGGGCTGATTTAAACTGCAATATTCAAGATGATGCTGGGGCTTTTTATGGTGTAA
CCAGTCAGTACGAGAGTTCTGAAAATATGACAGTCACCTGTTCCACCAAAGTTTGCTCCTTTGGGAAGCAAGTAGTAGAA
AAAGTAGAGACGGAGTATGCAAGGTTTGAGAATGGCCGATTTGTATACCGAATAAACCGCTCCCCAATGTGTGAATATAT
GATCAACTTCATCCACAAGCTCAAACACTTGCCAGAGAAATATATGATGAACAGTGTTTTGGAAAACTTCACAATTTTAT
TGGTGGTAACAAACAGGGATACGCAAGAAACTCTCCTCTGCATGGCCTGTGTGTTTGAAGTTTCAAATAGTGAACACGGA
GCACAACATCATATTTACAGGCTTGTAAAGGAC
ATGGAAAGGATGAGCGACTCTGCAGATAAGCCAATTGACAATGATGCAGAAGGGGTCTGGAGCCCCGACATTGAACAGAG
CTTTCAGGAGGCCCTGGCTATCTATCCGCCATGTGGGAGGAGGAAAATCATCTTATCAGACGAAGGCAAAATGTATGGTA
GGAATGAATTGATAGCCAGATACATCAAACTCAGGACAGGCAAGACGAGGACCAGAAAACAGGTGTCTAGTCACATTCAG
GTTCTTGCCAGAAGGAAATCTCGTGATTTTCATTCCAAGCTAAAGGATCAGACTGCAAAGGATAAGGCCCTGCAGCACAT
GGCGGCCATGTCCTCAGCCCAAATCGTTTCGGCCACTGCCATTCACAACAAGCTGGGGCTGCCTGGGATTCCACGCCCGA
CCTTCCCAGGGGCGCCGGGGTTCTGGCCAGGAATGATACAAACAGGGCAGCCAGGATCCTCACAAGACGTCAAGCCTTTT
GTGCAGCAGGCCTACCCCATCCAGCCAGCGGTCACAGCCCCCATTCCAGGTTTTGAGCCTGCATCAGCCCCAGCTCCCTC
GGTCCCTGCCTGGCAAGGTCGCTCCATTGGCACAACCAAGCTTCGCCTGGTGGAATTTTCAGCTTTTCTTGAACAGCAAC
GAGACCCAGACTCGTACAACAAACACCTCTTCGTGCACATTGGGCATGCCAACCATTCTTACAGTGACCCATTGCTTGAA
TCAGTGGACATTCGTCAGATTTATGACAAATTTCCTGAAAAGAAAGGTGGCTTAAAGGAACTGTTTGGAAAGGGCCCTCA
AAATGCCTTCTTCCTCGTAAAATTCTGGGCTGATTTAAACTGCAATATTCAAGATGATGCTGGGGCTTTTTATGGTGTAA
CCAGTCAGTACGAGAGTTCTGAAAATATGACAGTCACCTGTTCCACCAAAGTTTGCTCCTTTGGGAAGCAAGTAGTAGAA
AAAGTAGAGACGGAGTATGCAAGGTTTGAGAATGGCCGATTTGTATACCGAATAAACCGCTCCCCAATGTGTGAATATAT
GATCAACTTCATCCACAAGCTCAAACACTTGCCAGAGAAATATATGATGAACAGTGTTTTGGAAAACTTCACAATTTTAT
TGGTGGTAACAAACAGGGATACGCAAGAAACTCTCCTCTGCATGGCCTGTGTGTTTGAAGTTTCAAATAGTGAACACGGA
GCACAACATCATATTTACAGGCTTGTAAAGGAC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 4 .83 RPM |
| SRP051959_skeletal_muscle | 45 .88 RPM |
| SRP051959_lymph_node | 2 .08 RPM |
| SRP051959_lung | 22 .24 RPM |
| SRP051959_liver | 3 .99 RPM |
| SRP051959_kidney | 20 .59 RPM |
| SRP051959_heart | 43 .73 RPM |
| SRP051959_colon | 17 .93 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Tupaia belangeri | ENSTBEG00000017462 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000001514 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000006621 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_193 | 75.97 | 99.03 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000010263 retrocopies