Parental gene: | RNF38, ENSCJAG00000010299 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:138231727..138296312(-) |
>ENSCJAG00000010299
ATGGCTTGTAAGATATCTCCCGGGGCCAATTCAGCATCTCTACCTGGCCATCCTAACAAGGTGATTTGTGAAAGGGTGAG
ACTTCAGAGCCTGTTCCCTCTCCTCCCAAGTGATCAGAACACTACCGTTCAAGAGGATGCTCACTTCAAAGCTTTCTTCC
AGAGTGAAGATAGTCCAAGTCCCAAGAGACAGCGCCTCTCTCATTCAGTCTTTGATTATACATCAGCATCACCAGCTCCC
TCACCACCAATGCGACCATGGGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAGCCAACATCACTTCTCAGG
GGAACGATGCAATACACCTGCACGCAACAGAAGAAGTCCTCCTGTCAGGCGCCAGAGAGGAAGAAGGGATCGTCTGTCTC
GACATAATTCCATTAGTCAAGATGAAAACTATCACCATCTCCCTTACGCACAGCAGCAAGCAATAGAGGAGCCTCGAGCC
TTCCACCCTCCGAATGTATCTCCCCGTCTGTTACATCCTGCTGCTCATCCACCCCAGCAGAATGCAGTCATGGTTGACAT
ACATGATCAGCTCCATCAAGGAACAGTCCCTGTTTCTTACACAGTAACAACAGTGGCACCGCATGGGATTCCACTCTGCA
CAGGCCAGCACATCCCTGCTTGTAGTACACAGCAGGTCCCAGGATGCTCTGTGGTTTTCAGTGGACAGCACCTCCCTGTC
TGTAGTGTACCTCCTCCAATGCTTCAGGCATGTTCAGTTCAGCACTTACCAGTACCATATGCTGCATTCCCACCCCTTAT
TTCTAGTGATCCATTTCTTATACATCCTCCTCACCTTTCTCCCCATCATCCTCCTCATTTGCCACCACCAGGCCAGTTTG
TCCCTTTCCAGACGCAACAATCACGATCGCCCCTGCAAAGGATAGAAAATGAAGTGGAACTCTTAGGAGAACATCTTCCA
GTAGGAGGTTTTACTTACCCTCCATCAGCCCACCCTGCAACATTACCTCCATCAGCTCCTTTGCAGTTTTTAACACATGA
TCCTTTGCACCAGGAGGTGTCCTTTGGAGTACCTTATCCTCCATTTATGCCTCGTAGGCTCACAGGACGTAGTAGATACC
GATCCCAGCAGCCAATACCACCTCCCCCGTATCATCCCAGTTTACTGCCATATGTGTTATCAATGCTTCCAGTGCCACCT
GCAGTGGGCCCAACTTTCAGCTTTGAATTAGATGTAGAAGATGGAGAAGTAGAAAATTATGAGCCACAGGCCCTGTTAAA
CCTGGCAGAGCGACTGGGAGAGGCAAAGCCTCGAGGACTGACTAAAGCAGATATTGAACAACTTCCTTCTTATCGGTTCA
ATCCTAACAACCACCAGTCAGAACAGACTTTGTGTGTAGTGTGCATGTGTGATTTTGAGTCAAGGCAGCTACTTAGAGTC
TTACCCTGTAACCACGAGTTCCATGCCAAGTGTGTTGACAAATGGCTTAAGGCAAATCGTACTTGCCCAATTTGCCGAGC
TGATGCTTCAGAAGTGCATCGGGATTCAGAATGA
ATGGCTTGTAAGATATCTCCCGGGGCCAATTCAGCATCTCTACCTGGCCATCCTAACAAGGTGATTTGTGAAAGGGTGAG
ACTTCAGAGCCTGTTCCCTCTCCTCCCAAGTGATCAGAACACTACCGTTCAAGAGGATGCTCACTTCAAAGCTTTCTTCC
AGAGTGAAGATAGTCCAAGTCCCAAGAGACAGCGCCTCTCTCATTCAGTCTTTGATTATACATCAGCATCACCAGCTCCC
TCACCACCAATGCGACCATGGGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAGCCAACATCACTTCTCAGG
GGAACGATGCAATACACCTGCACGCAACAGAAGAAGTCCTCCTGTCAGGCGCCAGAGAGGAAGAAGGGATCGTCTGTCTC
GACATAATTCCATTAGTCAAGATGAAAACTATCACCATCTCCCTTACGCACAGCAGCAAGCAATAGAGGAGCCTCGAGCC
TTCCACCCTCCGAATGTATCTCCCCGTCTGTTACATCCTGCTGCTCATCCACCCCAGCAGAATGCAGTCATGGTTGACAT
ACATGATCAGCTCCATCAAGGAACAGTCCCTGTTTCTTACACAGTAACAACAGTGGCACCGCATGGGATTCCACTCTGCA
CAGGCCAGCACATCCCTGCTTGTAGTACACAGCAGGTCCCAGGATGCTCTGTGGTTTTCAGTGGACAGCACCTCCCTGTC
TGTAGTGTACCTCCTCCAATGCTTCAGGCATGTTCAGTTCAGCACTTACCAGTACCATATGCTGCATTCCCACCCCTTAT
TTCTAGTGATCCATTTCTTATACATCCTCCTCACCTTTCTCCCCATCATCCTCCTCATTTGCCACCACCAGGCCAGTTTG
TCCCTTTCCAGACGCAACAATCACGATCGCCCCTGCAAAGGATAGAAAATGAAGTGGAACTCTTAGGAGAACATCTTCCA
GTAGGAGGTTTTACTTACCCTCCATCAGCCCACCCTGCAACATTACCTCCATCAGCTCCTTTGCAGTTTTTAACACATGA
TCCTTTGCACCAGGAGGTGTCCTTTGGAGTACCTTATCCTCCATTTATGCCTCGTAGGCTCACAGGACGTAGTAGATACC
GATCCCAGCAGCCAATACCACCTCCCCCGTATCATCCCAGTTTACTGCCATATGTGTTATCAATGCTTCCAGTGCCACCT
GCAGTGGGCCCAACTTTCAGCTTTGAATTAGATGTAGAAGATGGAGAAGTAGAAAATTATGAGCCACAGGCCCTGTTAAA
CCTGGCAGAGCGACTGGGAGAGGCAAAGCCTCGAGGACTGACTAAAGCAGATATTGAACAACTTCCTTCTTATCGGTTCA
ATCCTAACAACCACCAGTCAGAACAGACTTTGTGTGTAGTGTGCATGTGTGATTTTGAGTCAAGGCAGCTACTTAGAGTC
TTACCCTGTAACCACGAGTTCCATGCCAAGTGTGTTGACAAATGGCTTAAGGCAAATCGTACTTGCCCAATTTGCCGAGC
TGATGCTTCAGAAGTGCATCGGGATTCAGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 12 .54 RPM |
| SRP051959_skeletal_muscle | 4 .35 RPM |
| SRP051959_lymph_node | 12 .76 RPM |
| SRP051959_lung | 17 .08 RPM |
| SRP051959_liver | 4 .64 RPM |
| SRP051959_kidney | 12 .62 RPM |
| SRP051959_heart | 9 .82 RPM |
| SRP051959_colon | 10 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005519 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002665 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2182 | 84.62 | 58.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000010299 retrocopies