Parental gene: | ARRDC3, ENSCJAG00000010525 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 2:116521499..116536319(+) |
>ENSCJAG00000010525
ATGGTGCTGGGAAAGGTGAAGAGTTTGACAATAAGCTTTGACTGTCTTAATGACAGCAATGTCCCTGTGTATTCTAGTGG
GGATACCGTCTCAGGAAGGGTAAATTTAGAAGTTACTGGGGAAATCAGAGTAAAATCTCTTAAAATTCATGCAAGAGGAC
ATGCGAAAGTACGCTGGACTGAATCTAGAAACGCCGGCTCCAATACTGCCTATACACAGAATTACACTGAAGAAGTAGAG
TATTTCAACCATAAAGACATCTTAATTGGGCACGAAAGAGATGATGATAATTCCGAAGAAGGCTTCCACACTATTCATTC
AGGAAGGCATGAATATGCATTCAGCTTCGAGCTTCCACAAACACCACTTGCTACCTCATTCGAAGGCCGACATGGCAGTG
TGCGCTATTGGGTGAAAGCCGAATTGCACAGGCCTTGGCTACTACCAGTAAAATTAAAGAAGGAATTTACAGTCTTTGAG
CATATAGATATCAACACTCCTTCATTACTGTCACCCCAAGCAGGCACGAAAGAAAAGACACTCTGTTGCTGGTTCTGTAC
CTCAGGCCCAATATCCTTAAGTGCCAAAATTGAAAGGAAGGGCTATACCCCAGGTGAATCAATTCAGATATTTGCTGAGA
TTGAGAACTGCTCTTCCCGAATGGTAGTGCCAAAGGCAGCCATTTACCAAACACAGGCTTTCTATGCCAAAGGGAAAATG
AAGGAAGTAAAACAGCTTGTGGCTAACTTGCGTGGGGAATCCTTATCATCTGGAAAGACAGAGACGTGGAATGGCAAGTT
GCTGAAAATTCCGCCAGTTTCTCCCTCTATCCTCGACTGTAGTATAATCCGTGTGGAATATTCACTAATGGTATATGTGG
ATATTCCTGGAGCTATGGATTTATTTCTTAATTTGCCACTTGTCATCGGTACCATTCCTCTACATCCATTTGGTAGCAGA
ACCTCAAGTGTAAGCAGTCAGTGTAGCATGAATATGAACTGGCTCGGTTTATCCCTTCCTGAAAGACCTGAAGCACCACC
CAGCTATGCAGAAGTGGTAACAGAGGAACAAAGGCGAAACAATCTTGCACCAGTGAATGCTTGTGATGACTTTGAGAGGG
CACTTCAAGGACCACTGTTTGCATATATCCAGGAGTTTCGGTTCTTGCCTCCACCTCTTTATTCAGAGATTGATCCAAAT
CCTGATCAGTCAGCAGATGATAGACCATCCTGCCCCTCTCGTTGA
ATGGTGCTGGGAAAGGTGAAGAGTTTGACAATAAGCTTTGACTGTCTTAATGACAGCAATGTCCCTGTGTATTCTAGTGG
GGATACCGTCTCAGGAAGGGTAAATTTAGAAGTTACTGGGGAAATCAGAGTAAAATCTCTTAAAATTCATGCAAGAGGAC
ATGCGAAAGTACGCTGGACTGAATCTAGAAACGCCGGCTCCAATACTGCCTATACACAGAATTACACTGAAGAAGTAGAG
TATTTCAACCATAAAGACATCTTAATTGGGCACGAAAGAGATGATGATAATTCCGAAGAAGGCTTCCACACTATTCATTC
AGGAAGGCATGAATATGCATTCAGCTTCGAGCTTCCACAAACACCACTTGCTACCTCATTCGAAGGCCGACATGGCAGTG
TGCGCTATTGGGTGAAAGCCGAATTGCACAGGCCTTGGCTACTACCAGTAAAATTAAAGAAGGAATTTACAGTCTTTGAG
CATATAGATATCAACACTCCTTCATTACTGTCACCCCAAGCAGGCACGAAAGAAAAGACACTCTGTTGCTGGTTCTGTAC
CTCAGGCCCAATATCCTTAAGTGCCAAAATTGAAAGGAAGGGCTATACCCCAGGTGAATCAATTCAGATATTTGCTGAGA
TTGAGAACTGCTCTTCCCGAATGGTAGTGCCAAAGGCAGCCATTTACCAAACACAGGCTTTCTATGCCAAAGGGAAAATG
AAGGAAGTAAAACAGCTTGTGGCTAACTTGCGTGGGGAATCCTTATCATCTGGAAAGACAGAGACGTGGAATGGCAAGTT
GCTGAAAATTCCGCCAGTTTCTCCCTCTATCCTCGACTGTAGTATAATCCGTGTGGAATATTCACTAATGGTATATGTGG
ATATTCCTGGAGCTATGGATTTATTTCTTAATTTGCCACTTGTCATCGGTACCATTCCTCTACATCCATTTGGTAGCAGA
ACCTCAAGTGTAAGCAGTCAGTGTAGCATGAATATGAACTGGCTCGGTTTATCCCTTCCTGAAAGACCTGAAGCACCACC
CAGCTATGCAGAAGTGGTAACAGAGGAACAAAGGCGAAACAATCTTGCACCAGTGAATGCTTGTGATGACTTTGAGAGGG
CACTTCAAGGACCACTGTTTGCATATATCCAGGAGTTTCGGTTCTTGCCTCCACCTCTTTATTCAGAGATTGATCCAAAT
CCTGATCAGTCAGCAGATGATAGACCATCCTGCCCCTCTCGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 164 .27 RPM |
| SRP051959_skeletal_muscle | 80 .91 RPM |
| SRP051959_lymph_node | 91 .69 RPM |
| SRP051959_lung | 240 .34 RPM |
| SRP051959_liver | 58 .53 RPM |
| SRP051959_kidney | 282 .74 RPM |
| SRP051959_heart | 36 .45 RPM |
| SRP051959_colon | 96 .52 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000036002 | within_species_paralog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013887 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015628 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_560 | 73.00 | 62.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000010525 retrocopies