Parental gene: | KIAA0020, ENSCJAG00000010917 |
| Aliases: | None |
| Description: | KIAA0020 [Source:HGNC Symbol;Acc:29676] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:104516060..104555356(-) |
>ENSCJAG00000010917
ATGGAAGTCAAAGGGAAAAAGCAATTCACAGGAAAGAGTACAAAGACATCACAAGAAAAACCCAGATTTCATAAAAATAG
TGATTCTGGTTCTTCAAAGAAATTTCCAAGAAAAGTTGCTAAGGAAGGTGGATCTAAAATCACATCTAACAACTTTGAGA
AAAATATCACAAAACCTGGGAAAAAGGGTGTGAAACAATTCAAGAATAAGCAGCAAGGGGACAAATCACCAAAGAACAAA
TTCCAGAAGGCAAATAAATTCAACAAGAAGAGAAAATTTCAGCCAGATAGTAAAAGCGATGAATCAGCAGCCAAGAAACC
CAAATGGGATGACTTCAAAAAGAAGAAGAAGGAACTGAAGCAAAGCAGACAACTCAGTGATAAAACCAACTATGACATTG
TTGTTCGGGCAAAGCAGATTTGGGAGATTTTAAGAAGAAAAGACTGTGACAAAGAAAAAAGAGTAAAGTTAATGAGTGAC
TTGCAGAAGTTGATTCAAGGGAAAATTAAAACTATTGCATTCGCACATGATTCAACTCGTGTGATCCAGTGTTACATTCA
GTATGGTGATGACAAACAGAGAAAACAGGCTTTTGAAGAATTGCAAGGTGATTTGATTGAATTAAGTAAAGCAAAATATT
CCAGAAATATTGTTAAGAAATTTCTTATGTATGGAAGTAAACCACAAATTGCAGAGATAATCAGAAGTTTTAAAGGCCAC
GTGAGGAAGATGCTGCGGCATGCGGAAGCGTCAGCCATCGTGGAGTATGCATACAATGACAAAGCCATTTTGGAGCAGAG
GAACATGCTGACGGAAGAGCTCTATGGGAACACATTTCAGCTTTACAAGTCAGCAGATCACCCAACTCTGGACAAAGTGT
TAGAGGTACGGCCAGAAAAATTAGAGCTTATTATGGATGAAATGAAACAGATTCTAACTCCAATGGCCCAAAAGGAAGCT
GTGATTAAGCACTCTCTGGTGCATAAAGTATTCTTGGACTTTTTTACCTATGCGCCCCCCAAACTCAGATCAGAAATGAT
TGAAGCCATCCGCGAAGCGGTGGTATACCTGGCACACACACACGATGGCGCCAGAGTGGCCATGCACTGCCTGTGGCACG
GTACCCCCAAGGACAGGAAAGTGATTGTGAAAACAATGAAGACTTACATTGAAAAGGTGGCTAATGGCCAGTACTCCCAT
TTGGTTTTACTGGCGGCATTTGATTGTATTGATGATACCAAGCTTGTGAAGCAGATAATCGTATCAGAAATTATCAGTTC
ATTGCCTAGCATAGTAAATGACAAATATGGAAGGAAGGTCCTATTGTACTTACTAAGCCCCAGAGATCCTGCACATACAG
TTCGAGAAATCATTGAAGTTCTGCAAAAAGGAGATGGAAATGCACACAGTAAGAAAGACACAGAGGTCCGCAGACGGGAA
CTCCTAGAATCCATTTCTCCAGCTTTGTTAAGCTACCTGCAAGAACACACCCAAGAGGTGGTGCTAGATAAGTCTGCCTG
TGTGTTGGTGTCTGACATTCTGGGATCTGCCACTGGAGATGTTCAGCCTGCCATGAATGCCATCGCCAGCTTGGCAGCAA
CAGAACTGCATCCTGGTGGCAAGGACGGAGAGCTTCACATTGCAGAACACCCTGCAGGACATCTAGTTCTGAAGTGGTTA
ATAGAGCAAGATAAAAAGATGAAAGAAAATGGGAGAGAAGGTTGTTTTGCAAAAACACTTGTAGAGCATGTCGGTATGAA
GAGCCTAAAGTCTTGGGCTAGCATAAATCGAGGTGCCATTATTCTTTCCAGCCTCCTCCAGAGTTGCGACCCAGAAGTTG
CAAACAAAGTCAAAGCTGCACTGAAAAGCTTGATTCCTGCATTAGAAAAAACCAAAAGCACCAGCAAAGGAGTAGAAGCT
CTGCTTGAAAAACTGACTACATAG
ATGGAAGTCAAAGGGAAAAAGCAATTCACAGGAAAGAGTACAAAGACATCACAAGAAAAACCCAGATTTCATAAAAATAG
TGATTCTGGTTCTTCAAAGAAATTTCCAAGAAAAGTTGCTAAGGAAGGTGGATCTAAAATCACATCTAACAACTTTGAGA
AAAATATCACAAAACCTGGGAAAAAGGGTGTGAAACAATTCAAGAATAAGCAGCAAGGGGACAAATCACCAAAGAACAAA
TTCCAGAAGGCAAATAAATTCAACAAGAAGAGAAAATTTCAGCCAGATAGTAAAAGCGATGAATCAGCAGCCAAGAAACC
CAAATGGGATGACTTCAAAAAGAAGAAGAAGGAACTGAAGCAAAGCAGACAACTCAGTGATAAAACCAACTATGACATTG
TTGTTCGGGCAAAGCAGATTTGGGAGATTTTAAGAAGAAAAGACTGTGACAAAGAAAAAAGAGTAAAGTTAATGAGTGAC
TTGCAGAAGTTGATTCAAGGGAAAATTAAAACTATTGCATTCGCACATGATTCAACTCGTGTGATCCAGTGTTACATTCA
GTATGGTGATGACAAACAGAGAAAACAGGCTTTTGAAGAATTGCAAGGTGATTTGATTGAATTAAGTAAAGCAAAATATT
CCAGAAATATTGTTAAGAAATTTCTTATGTATGGAAGTAAACCACAAATTGCAGAGATAATCAGAAGTTTTAAAGGCCAC
GTGAGGAAGATGCTGCGGCATGCGGAAGCGTCAGCCATCGTGGAGTATGCATACAATGACAAAGCCATTTTGGAGCAGAG
GAACATGCTGACGGAAGAGCTCTATGGGAACACATTTCAGCTTTACAAGTCAGCAGATCACCCAACTCTGGACAAAGTGT
TAGAGGTACGGCCAGAAAAATTAGAGCTTATTATGGATGAAATGAAACAGATTCTAACTCCAATGGCCCAAAAGGAAGCT
GTGATTAAGCACTCTCTGGTGCATAAAGTATTCTTGGACTTTTTTACCTATGCGCCCCCCAAACTCAGATCAGAAATGAT
TGAAGCCATCCGCGAAGCGGTGGTATACCTGGCACACACACACGATGGCGCCAGAGTGGCCATGCACTGCCTGTGGCACG
GTACCCCCAAGGACAGGAAAGTGATTGTGAAAACAATGAAGACTTACATTGAAAAGGTGGCTAATGGCCAGTACTCCCAT
TTGGTTTTACTGGCGGCATTTGATTGTATTGATGATACCAAGCTTGTGAAGCAGATAATCGTATCAGAAATTATCAGTTC
ATTGCCTAGCATAGTAAATGACAAATATGGAAGGAAGGTCCTATTGTACTTACTAAGCCCCAGAGATCCTGCACATACAG
TTCGAGAAATCATTGAAGTTCTGCAAAAAGGAGATGGAAATGCACACAGTAAGAAAGACACAGAGGTCCGCAGACGGGAA
CTCCTAGAATCCATTTCTCCAGCTTTGTTAAGCTACCTGCAAGAACACACCCAAGAGGTGGTGCTAGATAAGTCTGCCTG
TGTGTTGGTGTCTGACATTCTGGGATCTGCCACTGGAGATGTTCAGCCTGCCATGAATGCCATCGCCAGCTTGGCAGCAA
CAGAACTGCATCCTGGTGGCAAGGACGGAGAGCTTCACATTGCAGAACACCCTGCAGGACATCTAGTTCTGAAGTGGTTA
ATAGAGCAAGATAAAAAGATGAAAGAAAATGGGAGAGAAGGTTGTTTTGCAAAAACACTTGTAGAGCATGTCGGTATGAA
GAGCCTAAAGTCTTGGGCTAGCATAAATCGAGGTGCCATTATTCTTTCCAGCCTCCTCCAGAGTTGCGACCCAGAAGTTG
CAAACAAAGTCAAAGCTGCACTGAAAAGCTTGATTCCTGCATTAGAAAAAACCAAAAGCACCAGCAAAGGAGTAGAAGCT
CTGCTTGAAAAACTGACTACATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 10 .97 RPM |
| SRP051959_skeletal_muscle | 10 .42 RPM |
| SRP051959_lymph_node | 11 .44 RPM |
| SRP051959_lung | 11 .21 RPM |
| SRP051959_liver | 10 .83 RPM |
| SRP051959_kidney | 14 .78 RPM |
| SRP051959_heart | 10 .09 RPM |
| SRP051959_colon | 10 .41 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012187 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000008552 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000017341 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000041360 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000004189 | ortholog_many2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000000579 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2253 | 84.43 | 57.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000010917 retrocopies