Parental gene: | TAF5L, ENSCJAG00000010986 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 19:15558750..15580041(+) |
>ENSCJAG00000010986
ATGAAACGAGTGCGTACTGAGCAGATTCAGATGGCAGTGTCCTGCTACCTCAAACGCCGGCAGTATGTGGACTCAGATGG
TCCCCTGAAACAAGGACTGCGGCTGTCACAGACTGCTGAAGAGATGGCGGCCAATCTCACGGTGCAATCAGAATCTGGTT
GTGCCAACATAGTGTCTGCAGCCCCTTGCCAGGCAGAACCCCAGCAATATGAAGTACAGTTTGGACGACTGCGGAATTTT
CTCACCGATTCTGATTCCCAGCATAGCCACGAAGTGATGCCTCTCCTCTATCCTCTCTTTGTCTACCTCCATCTCAACCT
GGTCCAGAACAGTCCGAAGAGCACAGTGGAAAGTTTTTACAGCCGCTTCCATGGAATGTTTCTGCAGAACGCTAGCCAGA
AGGATGTCATTGAGCAGCTACAGACCACTCAAACCATCCAGGACATCCTGTCTAACTTCAAGCTTCGAGCATTCCTAGAT
AACAAGTACGTGGTCCGTCTCCAAGAAGACAGCTACAACTACCTTATCCGCTACCTCCAAAGTGACAACAATACTGCCCT
GTGCAGAGTCCTCACCTTACATATTCATCTTGACGTGCAGCCTGCCAAGAGAACAGACTACCAGCTGTATGCCAGTGGCA
GCTCCTCCCGCAGTGAGAACAACGGCTTGGAGCCCCCTGACATGCCCAGCCCTATTCTACAGAATGAGGCTGCCCTGGAG
GTCTTACAGGAGAGCATTAAGCGCGTCAAAGATGGGCCTCCCTCCCTCACTACCATCTGCTTCTATGCCTTCTATAACAC
AGAGCAGCTGTTGAACACTGCAGAAATCTCCCCCGATAGCAAACTACTTGCCGCTGGGTTTGACAACTCCTGTATAAAAC
TTTGGAGTTTACGATCCAAGAAGTTAAAATCAGAGCCCCATCAAGTAGACGTGTCCCGCATCCATTTGGCTTGTGATATT
CTGGAGGAGGAGGATGATGAGGATGATAACGCAGGCACAGAGATGAAGATACTTCGGGGACACTGCGGACCAGTATACAG
CACGAGGTTCCTCGCGGACAGCTCAGGGTTGCTCTCTTGTTCTGAAGACATGTCCATCAGATACTGGGATCTGGGGAGTT
TCACCAACACTGTGTTGTACCAAGGACATGCCTATCCCGTGTGGGATCTGGACATCAGTCCATATAGCCTGTACTTCGCC
AGTGGGTCCCACGACCGCACCGCCAGGCTGTGGTCATTTGATCGGACGTACCCACTGAGGATATATGCAGGACACCTGGC
AGATGTGGACTGTGTCAAATTCCACCCTAATTCAAACTACTTAGCTACGGGCTCAACCGACAAGACCGTCCGGCTGTGGA
GTGCTCAGCAGGGGAACTCGGTGAGGCTTTTCACAGGCCACCGTGGCCCCGTGCTTTCTCTTGCCTTTTCTCCTAACGGT
AAGTACTTGGCGTCTGCTGGCGAGGACCAGCGGTTGAAGCTGTGGGACTTGGCCTCTGGGACCCTTTATAAAGAGCTGAG
AGGCCACACAGACAATATCACCAGCCTCACCTTCAGTCCAGACAGCGGCTTGATTGCCTCTGCCTCCATGGACAACTCAG
TGCGCGTCTGGGACATCAGGAATACTTACTGCAGTGCACCTGCCGACGGCTCCTCCAGTGAGCTCGTGGGTGTGTACACC
GGGCAGATGAGCAACGTCTTGAGCGTGCAGTTCATGGCCTGTAACCTTCTTCTGGTGACTGGAATTACACAAGAAAATCA
GGAACATTAA
ATGAAACGAGTGCGTACTGAGCAGATTCAGATGGCAGTGTCCTGCTACCTCAAACGCCGGCAGTATGTGGACTCAGATGG
TCCCCTGAAACAAGGACTGCGGCTGTCACAGACTGCTGAAGAGATGGCGGCCAATCTCACGGTGCAATCAGAATCTGGTT
GTGCCAACATAGTGTCTGCAGCCCCTTGCCAGGCAGAACCCCAGCAATATGAAGTACAGTTTGGACGACTGCGGAATTTT
CTCACCGATTCTGATTCCCAGCATAGCCACGAAGTGATGCCTCTCCTCTATCCTCTCTTTGTCTACCTCCATCTCAACCT
GGTCCAGAACAGTCCGAAGAGCACAGTGGAAAGTTTTTACAGCCGCTTCCATGGAATGTTTCTGCAGAACGCTAGCCAGA
AGGATGTCATTGAGCAGCTACAGACCACTCAAACCATCCAGGACATCCTGTCTAACTTCAAGCTTCGAGCATTCCTAGAT
AACAAGTACGTGGTCCGTCTCCAAGAAGACAGCTACAACTACCTTATCCGCTACCTCCAAAGTGACAACAATACTGCCCT
GTGCAGAGTCCTCACCTTACATATTCATCTTGACGTGCAGCCTGCCAAGAGAACAGACTACCAGCTGTATGCCAGTGGCA
GCTCCTCCCGCAGTGAGAACAACGGCTTGGAGCCCCCTGACATGCCCAGCCCTATTCTACAGAATGAGGCTGCCCTGGAG
GTCTTACAGGAGAGCATTAAGCGCGTCAAAGATGGGCCTCCCTCCCTCACTACCATCTGCTTCTATGCCTTCTATAACAC
AGAGCAGCTGTTGAACACTGCAGAAATCTCCCCCGATAGCAAACTACTTGCCGCTGGGTTTGACAACTCCTGTATAAAAC
TTTGGAGTTTACGATCCAAGAAGTTAAAATCAGAGCCCCATCAAGTAGACGTGTCCCGCATCCATTTGGCTTGTGATATT
CTGGAGGAGGAGGATGATGAGGATGATAACGCAGGCACAGAGATGAAGATACTTCGGGGACACTGCGGACCAGTATACAG
CACGAGGTTCCTCGCGGACAGCTCAGGGTTGCTCTCTTGTTCTGAAGACATGTCCATCAGATACTGGGATCTGGGGAGTT
TCACCAACACTGTGTTGTACCAAGGACATGCCTATCCCGTGTGGGATCTGGACATCAGTCCATATAGCCTGTACTTCGCC
AGTGGGTCCCACGACCGCACCGCCAGGCTGTGGTCATTTGATCGGACGTACCCACTGAGGATATATGCAGGACACCTGGC
AGATGTGGACTGTGTCAAATTCCACCCTAATTCAAACTACTTAGCTACGGGCTCAACCGACAAGACCGTCCGGCTGTGGA
GTGCTCAGCAGGGGAACTCGGTGAGGCTTTTCACAGGCCACCGTGGCCCCGTGCTTTCTCTTGCCTTTTCTCCTAACGGT
AAGTACTTGGCGTCTGCTGGCGAGGACCAGCGGTTGAAGCTGTGGGACTTGGCCTCTGGGACCCTTTATAAAGAGCTGAG
AGGCCACACAGACAATATCACCAGCCTCACCTTCAGTCCAGACAGCGGCTTGATTGCCTCTGCCTCCATGGACAACTCAG
TGCGCGTCTGGGACATCAGGAATACTTACTGCAGTGCACCTGCCGACGGCTCCTCCAGTGAGCTCGTGGGTGTGTACACC
GGGCAGATGAGCAACGTCTTGAGCGTGCAGTTCATGGCCTGTAACCTTCTTCTGGTGACTGGAATTACACAAGAAAATCA
GGAACATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 11 .76 RPM |
| SRP051959_skeletal_muscle | 4 .80 RPM |
| SRP051959_lymph_node | 11 .87 RPM |
| SRP051959_lung | 9 .21 RPM |
| SRP051959_liver | 6 .22 RPM |
| SRP051959_kidney | 8 .08 RPM |
| SRP051959_heart | 7 .35 RPM |
| SRP051959_colon | 6 .12 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000034225 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000135801 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000028544 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002091 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000018027 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_4042 | 92.78 | 98.81 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000010986 retrocopies