Parental gene: | CSTF1, ENSCJAG00000011281 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:50392376..50403220(+) |
>ENSCJAG00000011281
ATGTATAGAACCAAAGTGGGCTTGAAGGACCGCCAGCAGCTCTACAAGCTGATCATTAGCCAGCTGCTGTATGACGGCTA
CATCAGCATCGCCAATGGCCTCATCAATGAAATCAAGCCTCAGTCTGTCTGTGCACCCTCGGAGCAGCTCCTGCATCTCA
TCAAACTAGGAATGGAAAATGATGACACCGCAGTGCAGTATGCAATTGGTCGTTCAGATACTGTTGCCCCTGGCACAGGA
ATTGACCTGGAATTTGATGCAGATGTCCAGACTATGTCCCCAGAGGCTTCTGAGTATGAAACATGCTATGTCACATCACA
TAAGGGACCATGCCGTGTAGCTACCTATAGTAGAGATGGACAGTTAATAGCTACTGGGTCTGCTGATGCTTCGATAAAGA
TACTTGACACAGAGAGGATGTTAGCCAAAAGTGCCATGCCAATAGAGGTCATGATGAATGAGACCGCACAACAAAATATG
GAAAACCACCCAGTGATTCGAACTCTTTATGACCATGTGGATGAAGTCACATGCCTCGCTTTCCACCCAACAGAACAGAT
TCTGGCTTCTGGTTCAAGGGATTATACTCTTAAATTATTTGATTATTCCAAACCATCAGCAAAAAGAGCCTTCAAATACA
TTCAGGAAGCTGAAATGTTACGCTCCATCTCTTTTCATCCTTCTGGAGACTTTATACTTGTTGGAACTCAGCATCCTACT
CTTCGTCTATATGATATCAACACCTTTCAATGTTTTGTCTCTTGCAATCCTCAAGATCAACACACCGATGCTATATGTTC
CGTTAATTACAATTCTAGTGCCAATATGTACGTAACTGGAAGCAAGGACGGCTGCATCAAATTATGGGATGGTGTTTCAA
ATCGATGCATCACAACTTTTGAAAAAGCACACGATGGGGCTGAAGTTTGTTCTGCCATTTTTTCCAAAAATTCTAAATAC
ATTCTCTCAAGTGGAAAAGACTCTGTAGCTAAACTTTGGGAAATATCAACAGGACGAACACTGGTCAGATACACGGGTGC
GGGTCTGAGTGGACGCCAGGTGCACCGGACACAGGCTGTGTTTAACCACACCGAGGACTATGTGTTGCTGCCCGACGAGA
GGACGATCAGTCTCTGCTGCTGGGACTCTAGGACGGCCGAGCGGAGAAACCTGCTTTCCTTGGGGCACAACAACATTGTA
CGCTGCATAGTGCACTCACCCACCAACCCTGGGTTCATGACGTGCAGCGATGACTTCAGAGCGCGATTTTGGTACCGGAG
ATCCACCACCGACTGA
ATGTATAGAACCAAAGTGGGCTTGAAGGACCGCCAGCAGCTCTACAAGCTGATCATTAGCCAGCTGCTGTATGACGGCTA
CATCAGCATCGCCAATGGCCTCATCAATGAAATCAAGCCTCAGTCTGTCTGTGCACCCTCGGAGCAGCTCCTGCATCTCA
TCAAACTAGGAATGGAAAATGATGACACCGCAGTGCAGTATGCAATTGGTCGTTCAGATACTGTTGCCCCTGGCACAGGA
ATTGACCTGGAATTTGATGCAGATGTCCAGACTATGTCCCCAGAGGCTTCTGAGTATGAAACATGCTATGTCACATCACA
TAAGGGACCATGCCGTGTAGCTACCTATAGTAGAGATGGACAGTTAATAGCTACTGGGTCTGCTGATGCTTCGATAAAGA
TACTTGACACAGAGAGGATGTTAGCCAAAAGTGCCATGCCAATAGAGGTCATGATGAATGAGACCGCACAACAAAATATG
GAAAACCACCCAGTGATTCGAACTCTTTATGACCATGTGGATGAAGTCACATGCCTCGCTTTCCACCCAACAGAACAGAT
TCTGGCTTCTGGTTCAAGGGATTATACTCTTAAATTATTTGATTATTCCAAACCATCAGCAAAAAGAGCCTTCAAATACA
TTCAGGAAGCTGAAATGTTACGCTCCATCTCTTTTCATCCTTCTGGAGACTTTATACTTGTTGGAACTCAGCATCCTACT
CTTCGTCTATATGATATCAACACCTTTCAATGTTTTGTCTCTTGCAATCCTCAAGATCAACACACCGATGCTATATGTTC
CGTTAATTACAATTCTAGTGCCAATATGTACGTAACTGGAAGCAAGGACGGCTGCATCAAATTATGGGATGGTGTTTCAA
ATCGATGCATCACAACTTTTGAAAAAGCACACGATGGGGCTGAAGTTTGTTCTGCCATTTTTTCCAAAAATTCTAAATAC
ATTCTCTCAAGTGGAAAAGACTCTGTAGCTAAACTTTGGGAAATATCAACAGGACGAACACTGGTCAGATACACGGGTGC
GGGTCTGAGTGGACGCCAGGTGCACCGGACACAGGCTGTGTTTAACCACACCGAGGACTATGTGTTGCTGCCCGACGAGA
GGACGATCAGTCTCTGCTGCTGGGACTCTAGGACGGCCGAGCGGAGAAACCTGCTTTCCTTGGGGCACAACAACATTGTA
CGCTGCATAGTGCACTCACCCACCAACCCTGGGTTCATGACGTGCAGCGATGACTTCAGAGCGCGATTTTGGTACCGGAG
ATCCACCACCGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 11 .60 RPM |
| SRP051959_skeletal_muscle | 5 .15 RPM |
| SRP051959_lymph_node | 12 .03 RPM |
| SRP051959_lung | 9 .27 RPM |
| SRP051959_liver | 5 .29 RPM |
| SRP051959_kidney | 7 .41 RPM |
| SRP051959_heart | 4 .68 RPM |
| SRP051959_colon | 5 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Tarsius syrichta | ENSTSYG00000003181 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3572 | 99.30 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_4012 | 99.54 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000011281 retrocopies