Parental gene: | ACAT2, ENSCJAG00000011777 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 4:160834241..160854769(+) |
>ENSCJAG00000011777
TCTTCAGGAAGATTTTCCAGGATGAATGTAGGCTCGGATCCCGTGGTCATCGTCTCGGCGGCTCGGACCATCATAGGCTC
CTTCAATGGTGCTTTAGCCTCTGTTCCAGTCCAGGACCTGGGCTCCACTGTCATCAAAGAGGTATTGAAGAGGGCCACTG
TGGCTCCGGATGATGTGTCTGAGGTCATCTTTGGACACGTTTTGGCAGCAGGTTGTGGGCAGAATCCTGTTAGACAGGCC
AGTGTGGGTGCAGGAATTCCTTACTCTGTTCCAGCGTGGAGCTGCCAGATGATCTGTGGGTCAGGCCTAAAAGCTGTGTG
CCTTGCGGCCCAGTCAATAGGGATAGGAGACTCCAGCATTGTGATTGCAGGAGGCATGGAAAATATGAGCAAGGCTCCTC
ACTTGACTCACTTGAGAACAGGAGTAAAGATAGGTGAGATGGTACTAGCTGACAGTATACTCTCTGATGGTCTTACCGAT
GCATTTCACAACTGTCATATGGGTATTACAGCTGAAAATGTAGCTAAAAAGTGGCAAGTGAGTAGAGAAGATCAGGACAA
GGTTGCAGTTCTATCCCAGAACAGGACAGAGAATGCACAGAAAGCTGGCCATTTTGACAAAGAGATTGTGCCAGTTTTTG
TGTCATCTAGAAAAGGTCTTATTGAAGTTAAAACAGATGAGTTTCCTCGCCATGGGAGCAACATAGAGGCTATGTCCAAG
CTAAAACCTTACTTTCTTACAGATGGAACAGGAACAGTCACCCCAGCTAATGCTTCAGGAATGAATGATGGTGCTGCCGC
TGTGGTTCTTATGAAGAAGTCAGAAGCTGATAAACGTGGGCTTACACCTTTAGCACAGATAGTTTCCTGGTCGCAAGTGG
GTGTGGAGCCTTCCATTATGGGAATAGGACCAATTCCAGCCATAAAGCAAGCTGTTGCAAAAGCAGGTTGGTCACTTGAG
GATGTTGATATATTTGAAATCAATGAAGCCTTTGCAGCTGTCTCTGTTGCAATTGTTAAAGAACTTGGACTAAACCCAGA
GAAGGTCAACATTCAAGGAGGTGCTATAGCCTTGGGCCACCCTCTTGGGGCATCTGGCTGTCGAATTCTTGTGACCCTGT
TACACGCACTGGAGAGAACGGGTGGAAATCGTGGAGTTGCGGCCCTGTGCATTGGGGGTGGGATGGGAATAGCAATGTGT
GTTCAGAGAGCATGA
TCTTCAGGAAGATTTTCCAGGATGAATGTAGGCTCGGATCCCGTGGTCATCGTCTCGGCGGCTCGGACCATCATAGGCTC
CTTCAATGGTGCTTTAGCCTCTGTTCCAGTCCAGGACCTGGGCTCCACTGTCATCAAAGAGGTATTGAAGAGGGCCACTG
TGGCTCCGGATGATGTGTCTGAGGTCATCTTTGGACACGTTTTGGCAGCAGGTTGTGGGCAGAATCCTGTTAGACAGGCC
AGTGTGGGTGCAGGAATTCCTTACTCTGTTCCAGCGTGGAGCTGCCAGATGATCTGTGGGTCAGGCCTAAAAGCTGTGTG
CCTTGCGGCCCAGTCAATAGGGATAGGAGACTCCAGCATTGTGATTGCAGGAGGCATGGAAAATATGAGCAAGGCTCCTC
ACTTGACTCACTTGAGAACAGGAGTAAAGATAGGTGAGATGGTACTAGCTGACAGTATACTCTCTGATGGTCTTACCGAT
GCATTTCACAACTGTCATATGGGTATTACAGCTGAAAATGTAGCTAAAAAGTGGCAAGTGAGTAGAGAAGATCAGGACAA
GGTTGCAGTTCTATCCCAGAACAGGACAGAGAATGCACAGAAAGCTGGCCATTTTGACAAAGAGATTGTGCCAGTTTTTG
TGTCATCTAGAAAAGGTCTTATTGAAGTTAAAACAGATGAGTTTCCTCGCCATGGGAGCAACATAGAGGCTATGTCCAAG
CTAAAACCTTACTTTCTTACAGATGGAACAGGAACAGTCACCCCAGCTAATGCTTCAGGAATGAATGATGGTGCTGCCGC
TGTGGTTCTTATGAAGAAGTCAGAAGCTGATAAACGTGGGCTTACACCTTTAGCACAGATAGTTTCCTGGTCGCAAGTGG
GTGTGGAGCCTTCCATTATGGGAATAGGACCAATTCCAGCCATAAAGCAAGCTGTTGCAAAAGCAGGTTGGTCACTTGAG
GATGTTGATATATTTGAAATCAATGAAGCCTTTGCAGCTGTCTCTGTTGCAATTGTTAAAGAACTTGGACTAAACCCAGA
GAAGGTCAACATTCAAGGAGGTGCTATAGCCTTGGGCCACCCTCTTGGGGCATCTGGCTGTCGAATTCTTGTGACCCTGT
TACACGCACTGGAGAGAACGGGTGGAAATCGTGGAGTTGCGGCCCTGTGCATTGGGGGTGGGATGGGAATAGCAATGTGT
GTTCAGAGAGCATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 3 .61 RPM |
| SRP051959_skeletal_muscle | 3 .58 RPM |
| SRP051959_lymph_node | 4 .79 RPM |
| SRP051959_lung | 3 .94 RPM |
| SRP051959_liver | 122 .12 RPM |
| SRP051959_kidney | 6 .66 RPM |
| SRP051959_heart | 3 .60 RPM |
| SRP051959_colon | 19 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000002827 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000002502 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000012843 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000007156 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019189 | ortholog_one2many | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000021174 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1372 | 92.43 | 61.88 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000011777 retrocopies