Parental gene: | EIF3L, ENSCJAG00000012225 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:200302267..200338719(+) |
>ENSCJAG00000012225
ATTGCCAGCGGGCTCGGAAAGGCTTCCGGTTTCCCGGCAGGCCCGAGTGGGGCTGAACTTCCGGCCTCAGGACGCAGGCG
TGGCTTGCTCATTTCTCTCTTTCCGGCAGTGCTCGTGAGCCCGGCAGCCATGTCCTATGCCGCTGATGATTACGAATCCG
AGGCGGCTTATGACCCCTATGCTTATCCGGGCGACTATGATATGCACACAGGAGATCCAAAGCAGGACCTTGCTTATGAG
CGTCAGTATGAACAGCAGACCTATCAGGTGATCCCTGAGGTGATCAAGAACTTCATCCAGTATTTCCACAAAACTGTCTC
GGATTTGATTGACCAGAAAGTGTATGAGCTACAGGCCAGTCGAGTCTCCAGCGATGTCATTGACCAGAAGGTATATGAGA
TCCAGGACATCTATGAGAACAGCTGGACCAAGCTGACTGAAAGATTCTTCAAGAATACACCTTGGCCCGAGGCTGAAGCC
ATTGCTCCACAGGTTGGCAACGATGCTGTCTTCCTGATTTTATACAAAGAATTGTACTACAGGCACATATATGCCAAAGT
CAGTGGGGGACCTTCCTTGGAGCAGAGGTTTGAATCCTATTACAACTATTGCAATCTCTTCAACTACATTCTTAATGCTG
ATGGTCCTGCTCCCCTTGAACTACCCAACCAGTGGCTCTGGGATATCATCGATGAGTTCATCTACCAGTTCCAGTCCTTC
AGTCAGTACCGCTGCAAGACTGCCAAGAAGTCAGAGGAGGAGATTGACTTCCTTCGTTCCAATCCCAAAATCTGGAATGT
TCACAGTGTCCTGAATGTCCTTCATTCCCTAGTAGACAAATCCAACATCAACCGACAGTTGGAGGTATACACAAGCGGAG
GTGACCCCGAGAGTGTGGCTGGGGAGTATGGGCGGCACTCCCTCTACAAGATGCTTGGTTACTTCAGCCTGGTGGGGCTT
CTCCGCCTGCACTCCCTGTTGGGGGATTACTACCAGGCCATCAAGGTGCTGGAGAACATCGAACTGAACAAAAAGAGTAT
GTATTCCCGTGTTCCAGAGTGCCAGGTCACCACGTACTATTATGTTGGATTTGCATATTTGATGATGCGTCGCTACCAGG
ATGCCATCCGGGTCTTTGCCAACATCCTCCTCTATATCCAGAGGACCAAGAGCATGTTCCAGAGGACCACATATAAGTAT
GAGATGATTAACAAGCAGAATGAGCAGATGCATGCGCTGCTGGCCATTGCCCTCACCATGTACCCCATGCGTATCGATGA
GAGCATTCACCTCCAACTGCGGGAGAAATACGGGGACAAGATGCTGCGCATGCAGAAAGGTGACCCACAAGTCTATGAAG
AACTTTTCAGTTACTCCTGCCCCAAGTTTCTATCGCCAGTAGTGCCCAACTATGATAATGTGCACCCCAACTACCACAAA
GAGCCCTTCCTGCAGCAGCTGAAGGTGTTTGCTGATGAGGTACAGCAGCAGGCCCAGCTTTCAACCATCCGCAGCTTCCT
CAAGCTCTACACCACCATGCCTGTGGCCAAGCTGGCTGGCTTCCTGGATCTCACAGAGCAGGAGTTCCGGATCCAGCTGC
TTGTATTCAAACACAAGATGAAGAACCTGGTATGGACCAGCGGTATTTCAGCCCTGGATGGTGAATTTCAGTCAGCCTCA
GAGGTTGACTTCTACATTGATAAGGATATGATCCACATCGCGGACACCAAGGTCGCCAGGCGCTATGGGGATTTCTTCAT
CCGTCAGATCCACAAATTCGAGGAGCTTAATCGAACCCTGAAGAAGATGGGACAGAGACCCTGA
ATTGCCAGCGGGCTCGGAAAGGCTTCCGGTTTCCCGGCAGGCCCGAGTGGGGCTGAACTTCCGGCCTCAGGACGCAGGCG
TGGCTTGCTCATTTCTCTCTTTCCGGCAGTGCTCGTGAGCCCGGCAGCCATGTCCTATGCCGCTGATGATTACGAATCCG
AGGCGGCTTATGACCCCTATGCTTATCCGGGCGACTATGATATGCACACAGGAGATCCAAAGCAGGACCTTGCTTATGAG
CGTCAGTATGAACAGCAGACCTATCAGGTGATCCCTGAGGTGATCAAGAACTTCATCCAGTATTTCCACAAAACTGTCTC
GGATTTGATTGACCAGAAAGTGTATGAGCTACAGGCCAGTCGAGTCTCCAGCGATGTCATTGACCAGAAGGTATATGAGA
TCCAGGACATCTATGAGAACAGCTGGACCAAGCTGACTGAAAGATTCTTCAAGAATACACCTTGGCCCGAGGCTGAAGCC
ATTGCTCCACAGGTTGGCAACGATGCTGTCTTCCTGATTTTATACAAAGAATTGTACTACAGGCACATATATGCCAAAGT
CAGTGGGGGACCTTCCTTGGAGCAGAGGTTTGAATCCTATTACAACTATTGCAATCTCTTCAACTACATTCTTAATGCTG
ATGGTCCTGCTCCCCTTGAACTACCCAACCAGTGGCTCTGGGATATCATCGATGAGTTCATCTACCAGTTCCAGTCCTTC
AGTCAGTACCGCTGCAAGACTGCCAAGAAGTCAGAGGAGGAGATTGACTTCCTTCGTTCCAATCCCAAAATCTGGAATGT
TCACAGTGTCCTGAATGTCCTTCATTCCCTAGTAGACAAATCCAACATCAACCGACAGTTGGAGGTATACACAAGCGGAG
GTGACCCCGAGAGTGTGGCTGGGGAGTATGGGCGGCACTCCCTCTACAAGATGCTTGGTTACTTCAGCCTGGTGGGGCTT
CTCCGCCTGCACTCCCTGTTGGGGGATTACTACCAGGCCATCAAGGTGCTGGAGAACATCGAACTGAACAAAAAGAGTAT
GTATTCCCGTGTTCCAGAGTGCCAGGTCACCACGTACTATTATGTTGGATTTGCATATTTGATGATGCGTCGCTACCAGG
ATGCCATCCGGGTCTTTGCCAACATCCTCCTCTATATCCAGAGGACCAAGAGCATGTTCCAGAGGACCACATATAAGTAT
GAGATGATTAACAAGCAGAATGAGCAGATGCATGCGCTGCTGGCCATTGCCCTCACCATGTACCCCATGCGTATCGATGA
GAGCATTCACCTCCAACTGCGGGAGAAATACGGGGACAAGATGCTGCGCATGCAGAAAGGTGACCCACAAGTCTATGAAG
AACTTTTCAGTTACTCCTGCCCCAAGTTTCTATCGCCAGTAGTGCCCAACTATGATAATGTGCACCCCAACTACCACAAA
GAGCCCTTCCTGCAGCAGCTGAAGGTGTTTGCTGATGAGGTACAGCAGCAGGCCCAGCTTTCAACCATCCGCAGCTTCCT
CAAGCTCTACACCACCATGCCTGTGGCCAAGCTGGCTGGCTTCCTGGATCTCACAGAGCAGGAGTTCCGGATCCAGCTGC
TTGTATTCAAACACAAGATGAAGAACCTGGTATGGACCAGCGGTATTTCAGCCCTGGATGGTGAATTTCAGTCAGCCTCA
GAGGTTGACTTCTACATTGATAAGGATATGATCCACATCGCGGACACCAAGGTCGCCAGGCGCTATGGGGATTTCTTCAT
CCGTCAGATCCACAAATTCGAGGAGCTTAATCGAACCCTGAAGAAGATGGGACAGAGACCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 133 .36 RPM |
| SRP051959_skeletal_muscle | 93 .25 RPM |
| SRP051959_lymph_node | 144 .26 RPM |
| SRP051959_lung | 115 .16 RPM |
| SRP051959_liver | 113 .18 RPM |
| SRP051959_kidney | 97 .97 RPM |
| SRP051959_heart | 86 .60 RPM |
| SRP051959_colon | 108 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000019068 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000029444 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000014352 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1234 | 93.85 | 71.99 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000012225 retrocopies