Parental gene: | RHBDD1, ENSCJAG00000012767 |
| Aliases: | None |
| Description: | rhomboid domain containing 1 [Source:HGNC Symbol;Acc:23081] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 6:143386328..143520056(+) |
>ENSCJAG00000012767
ATGCAGCGGAGATCAAGAGGAATAAATGCCGGACTTATTCTGCTTCTTTCTCAAATCTTCCATGTTGGGATCAACAACAT
TCCACCTGTCACCCTAGCAACTTTGGCCCTCAACATCTGGTTCTTCTTGAATCCTCTGAAGTCACTATATAGCTCCTGCC
TTAGCGTGGAGAAGTGTTACCAGCAAAACGACTGGCAGCGATTACTGCTCTCTCCCTTTCACCATGCTGATGATTGGCAT
TTATATTTCAATATGGCATCCATGCTCTGGAAAGGAATAAATCTAGAAAAAAGATTGGGAAGTAGATGGTTTGTCTGTGT
TATCACCACATTTTCCATACTTACTGGAGTGGTATACCTGCTCTTGCAATTTGCTGTTGCCGAATTTATGGATGAACCTG
ACTTCAAAAGGAGCTGTGCTGTAGGGTTCTCAGGAGTTTTGTTTGCTTTGAAAGTTCTTAACAACCATTATTGCCCTGGA
GGCTTTGTCAACGTCTTGGGCTTTCCTGTACCAAACAGATTTGCTTGCTGGGTCGAACTTGTGGCTATTCATTTATGCTC
ACCAGGGACTTCCTTCGCTGGGCATCTGGCTGGGATTCTTGTTGGACTAATGTACACTCAAGGGCCTCTGAAGAAAATCA
TGGAAGCATGTGCAGGCATTTTTTCCTCCAATGCTGGTTACCCAGGACAGCAATACTACTTTAATAGTTCAGGCAGCTCT
GGATATCAGGATTATTATCCATATGGCAGCCCAGGTCACTCTGAAGAAGCACCCAGGAACTATGACGCGTACACAGCAGG
ACTGAGTGAAGAAGAACAGCTTGAGAGAGCATTACGAGCCAGCCTCTGGGACCGAGGAAATACCAGAAATAGCCCACCAC
CCTATGGGTTTCGTCTCTCAGCAGAAGAAGAAATGAGGAGACAGCGGCTTCACAGATTCGATGGCCATTGA
ATGCAGCGGAGATCAAGAGGAATAAATGCCGGACTTATTCTGCTTCTTTCTCAAATCTTCCATGTTGGGATCAACAACAT
TCCACCTGTCACCCTAGCAACTTTGGCCCTCAACATCTGGTTCTTCTTGAATCCTCTGAAGTCACTATATAGCTCCTGCC
TTAGCGTGGAGAAGTGTTACCAGCAAAACGACTGGCAGCGATTACTGCTCTCTCCCTTTCACCATGCTGATGATTGGCAT
TTATATTTCAATATGGCATCCATGCTCTGGAAAGGAATAAATCTAGAAAAAAGATTGGGAAGTAGATGGTTTGTCTGTGT
TATCACCACATTTTCCATACTTACTGGAGTGGTATACCTGCTCTTGCAATTTGCTGTTGCCGAATTTATGGATGAACCTG
ACTTCAAAAGGAGCTGTGCTGTAGGGTTCTCAGGAGTTTTGTTTGCTTTGAAAGTTCTTAACAACCATTATTGCCCTGGA
GGCTTTGTCAACGTCTTGGGCTTTCCTGTACCAAACAGATTTGCTTGCTGGGTCGAACTTGTGGCTATTCATTTATGCTC
ACCAGGGACTTCCTTCGCTGGGCATCTGGCTGGGATTCTTGTTGGACTAATGTACACTCAAGGGCCTCTGAAGAAAATCA
TGGAAGCATGTGCAGGCATTTTTTCCTCCAATGCTGGTTACCCAGGACAGCAATACTACTTTAATAGTTCAGGCAGCTCT
GGATATCAGGATTATTATCCATATGGCAGCCCAGGTCACTCTGAAGAAGCACCCAGGAACTATGACGCGTACACAGCAGG
ACTGAGTGAAGAAGAACAGCTTGAGAGAGCATTACGAGCCAGCCTCTGGGACCGAGGAAATACCAGAAATAGCCCACCAC
CCTATGGGTTTCGTCTCTCAGCAGAAGAAGAAATGAGGAGACAGCGGCTTCACAGATTCGATGGCCATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 4 .45 RPM |
| SRP051959_skeletal_muscle | 1 .57 RPM |
| SRP051959_lymph_node | 4 .52 RPM |
| SRP051959_lung | 3 .94 RPM |
| SRP051959_liver | 3 .18 RPM |
| SRP051959_kidney | 3 .71 RPM |
| SRP051959_heart | 2 .46 RPM |
| SRP051959_colon | 3 .15 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000144468 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000000723 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013235 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000012990 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2386 | 67.26 | 52.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000012767 retrocopies