Parental gene: | TRIM24, ENSCJAG00000012885 |
| Aliases: | None |
| Description: | tripartite motif containing 24 [Source:HGNC Symbol;Acc:11812] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 8:107580272..107704702(-) |
>ENSCJAG00000012885
ATGGAGGTGGCGGTGGAGAAGGCGGCGGCCTTAGCGGCGGCCTCTGGGGGACCCTCAGCCGCGCCGAGCGGGGAGAACGA
GGCCGAGAGTCGTCAGGGTCCCGACTCGGAGCGCGGCAGCGAGGCGCGGCTCAACCTGTTGGGCACTTGCGCCGTGTGCC
ACCAGAACATCCAGAGCCGGGCGCCCAAGCTGCTGCCCTGCCTGCACTCTTTCTGCCAGCGCTGCCTGCCCGCGCCCCAG
CGGTATCTCATGCTGCCCGCGCCCATGCTGGGCTCGGCGGAGACCCCGCCGCCCGTTCCTGCCCCGGGCTCGCCGGTCAG
CGGCTCGTCGCCGTTCGCCACCCAAGTTGGAGTCATTCGATGCCCAGTTTGCAGCCAAGAATGTGCAGAAAGACACATCA
TAGATAACTTTTTTGTGAAGGACACTACTGAGGTTCCCAGCAGTACAGTAGAAAAGTCAAATCAGGTGTGCACAAGCTGT
GAGGACAACGCAGAAGCTAATGGCTTTTGTGTAGAGTGTGTTGAATGGCTCTGCAAGACATGTATCAGAGCTCATCAGAG
GGTAAAGTTCACAAAAGACCACACTGTCAGACAGAAAGAGGAAGTATCTCCAGAGGCAGTTGGTGTCACTAGCCAGCGAC
CAGTGTTTTGTCCTTTTCATAAAAAGGAGCAGTTGAAGCTGTACTGTGAGACATGTGACAAACTGACATGTCGGGACTGT
CAGTTATTAGAACATAAAGAGCATAGATATCAATTTATAGAAGAAGCTTTTCAGAATCAGAAAGTGATCATAGATACACT
AATCACCAAACTGATGGAAAAAACAAAATACATAAAATTCACAGGAAATCAAATCCAAAACAGAATTATTGAAGTAAATC
AAAATCAAAAGCAGGTGGAACAGGATATTAAAGTTGCTATATTTACATTGATGGTAGAAATAAATAAAAAAGGAAAAGCT
CTACTGCATCAGTTAGAGAGCCTTGCAAAGGACCATCGCATGAAACTTATGCAACAACAACAGGAAGTGGCTGGACTTTC
TAAACAATTGGAGCATGTCATGCATTTTTCTAAATGGGCAGTTTCCAGTGGCAGTAGTACAGCATTACTTTATAGCAAAC
GACTGATTACATACCGGTTGCGGCACCTCCTTCGTGCAAGATGTGATGCGTCCCCAGTGACCAACAACACCATCCAGTTT
CACTGTGATCCTAGTTTCTGGGCTCAAAATATTATCAACTTAGGTTCTTTAGTAATCGAGGATAAAGAGAGCCAGCCACA
AATGCCTAAGCAGAATCCTGTCGTGGAACAGAATTCACAGCCACCAAGTGGTTTATCATCAAACCAGTTATCCAAGTTTC
CAACACAGATCAGCCTAGCTCAATTACGGCTCCAGCATATGCAGCAACAGGTAATGGCTCAGAGGCAACAGGTGCAACGG
AGGCCAGCACCTGTGGGTTTACCAAACCCTAGAATGCAGGGGCCCATCCAGCAACCTTCCATCTCTCATCAGCAACCCCC
TCCACGTTTGATAAACTTTCAGAATCATAGCCCCAAACCCAATGGACCTGTTCTTCCGCCTCATCCTCAACAACTGAGAT
ATCCACCAAACCAGAATATACCACGACAAGCAATAAAGCCCAACCCCCTACAAATGGCTTTCTTGGCTCAACAAGCCATA
AAACAGTGGCAGATCAGCAGTGGACAGGGTGCCCCATCAACTACCAACAGCACATCCTCTACTCCTTCCAGCCCCACGAT
TACTAGTGCAGCAGGATATGATGGAAAGGCTTTTGGTTCACCTATGATCGATTTAAGCTCACCAGTGGGAGGTTCTTATA
ATCTTCCCTCTCTTCCAGATATTGACTGTTCAAGTACTATTATGCTGGACAGCATTGTGAGGAAAGATACTAATATAGAT
CATGGCCAGCCAAGACCACCCTCAAACAGAACGGTCCAGTCACCAAATTCCTCAGTGCCATCTCCAGGCCTAGCAGGACC
TGTTACTATGACTAGTGTACACCCCCCAATACGTTCACCGAGTGCCTCCAGCGTTGGAAGCCGAGGAAGCTCTGGCTCTT
CCAGCAAACCAGCAGGAGCTGATTCTACACACAAAGTCCCAGTGGTAATGTTGGAGCCAATTCGAATAAAACAAGAAAAC
AGTGGACCACCTGAAAATTATGATTTCCCTGTTGTTATAGTGAAGCAAGAATCAGATGAAGAATCCAGGCCTCAAAATGC
CAATTATCCAAGAAGCATACTCACCTCCCTGCTCTTAAATAGCAGTCAGAGCTCTACTTCTGAGGAGACTGTGCTAAGAT
CAGATGCCCCTGATAGTACAGGAGATCAACCTGGACTTCAGCAGGAGAATTCCTCGAATGGAAAGTCTGAGTGGCTGGAT
CCTTCCCAGAAGTCACCCCTTCACGTTGGAGAGACAAGGAAAGAGGATGACCCAAATGAGGACTGGTGTGCAGTTTGTCA
AAACGGAGGGGAACTCCTGTGCTGTGAAAAGTGCCCCAAAGTATTCCATCTTTCTTGTCATGTGCCCACACTGACAAATT
TTCCAAGTGGAGAGTGGATTTGCACTTTCTGCCGAGACTTATCTAAACCAGAAGTTGAATATGATTGTGATGCTCCCAGT
CACAACTCAGAAAAAAGGAAAACTGAAGGCCTTGTTAAATTAACACCTATAGATAAAAGGAAGTGTGAGCGCCTACTTTT
ATTTCTTTACTGCCATGAAATGAGCCTGGCTTTTCAAGACCCTGTTCCTCTAACTGTAAGTCCAGACTTCAAAAATACAA
AAAAGCCGATGGATTTGTCAACCATCAAGAAGAGACTACAAGAAGATTATTCCATGTACTCAAAACCTGAAGATTTTGTA
GCTGATTTTAGATTGATCTTTCAAAACTGTGCTGAATTCAATGAGCCTGATTCAGAAGTAGCTAATGCTGGTATAAAACT
TGAAAATTATTTTGAAGAACTTCTAAAGAACCTCTATCCAGAAAAAAGGTTTCCTAAACCAGAATTCAGGAATGAATCAG
AAGATAATAAATACAGTGATGATTCAGATGATGACTTTGTACAGCCCCGAAAGAAACGCCTCAAAAGCATTGAAGAACGC
CAGTTGCTTAAATAA
ATGGAGGTGGCGGTGGAGAAGGCGGCGGCCTTAGCGGCGGCCTCTGGGGGACCCTCAGCCGCGCCGAGCGGGGAGAACGA
GGCCGAGAGTCGTCAGGGTCCCGACTCGGAGCGCGGCAGCGAGGCGCGGCTCAACCTGTTGGGCACTTGCGCCGTGTGCC
ACCAGAACATCCAGAGCCGGGCGCCCAAGCTGCTGCCCTGCCTGCACTCTTTCTGCCAGCGCTGCCTGCCCGCGCCCCAG
CGGTATCTCATGCTGCCCGCGCCCATGCTGGGCTCGGCGGAGACCCCGCCGCCCGTTCCTGCCCCGGGCTCGCCGGTCAG
CGGCTCGTCGCCGTTCGCCACCCAAGTTGGAGTCATTCGATGCCCAGTTTGCAGCCAAGAATGTGCAGAAAGACACATCA
TAGATAACTTTTTTGTGAAGGACACTACTGAGGTTCCCAGCAGTACAGTAGAAAAGTCAAATCAGGTGTGCACAAGCTGT
GAGGACAACGCAGAAGCTAATGGCTTTTGTGTAGAGTGTGTTGAATGGCTCTGCAAGACATGTATCAGAGCTCATCAGAG
GGTAAAGTTCACAAAAGACCACACTGTCAGACAGAAAGAGGAAGTATCTCCAGAGGCAGTTGGTGTCACTAGCCAGCGAC
CAGTGTTTTGTCCTTTTCATAAAAAGGAGCAGTTGAAGCTGTACTGTGAGACATGTGACAAACTGACATGTCGGGACTGT
CAGTTATTAGAACATAAAGAGCATAGATATCAATTTATAGAAGAAGCTTTTCAGAATCAGAAAGTGATCATAGATACACT
AATCACCAAACTGATGGAAAAAACAAAATACATAAAATTCACAGGAAATCAAATCCAAAACAGAATTATTGAAGTAAATC
AAAATCAAAAGCAGGTGGAACAGGATATTAAAGTTGCTATATTTACATTGATGGTAGAAATAAATAAAAAAGGAAAAGCT
CTACTGCATCAGTTAGAGAGCCTTGCAAAGGACCATCGCATGAAACTTATGCAACAACAACAGGAAGTGGCTGGACTTTC
TAAACAATTGGAGCATGTCATGCATTTTTCTAAATGGGCAGTTTCCAGTGGCAGTAGTACAGCATTACTTTATAGCAAAC
GACTGATTACATACCGGTTGCGGCACCTCCTTCGTGCAAGATGTGATGCGTCCCCAGTGACCAACAACACCATCCAGTTT
CACTGTGATCCTAGTTTCTGGGCTCAAAATATTATCAACTTAGGTTCTTTAGTAATCGAGGATAAAGAGAGCCAGCCACA
AATGCCTAAGCAGAATCCTGTCGTGGAACAGAATTCACAGCCACCAAGTGGTTTATCATCAAACCAGTTATCCAAGTTTC
CAACACAGATCAGCCTAGCTCAATTACGGCTCCAGCATATGCAGCAACAGGTAATGGCTCAGAGGCAACAGGTGCAACGG
AGGCCAGCACCTGTGGGTTTACCAAACCCTAGAATGCAGGGGCCCATCCAGCAACCTTCCATCTCTCATCAGCAACCCCC
TCCACGTTTGATAAACTTTCAGAATCATAGCCCCAAACCCAATGGACCTGTTCTTCCGCCTCATCCTCAACAACTGAGAT
ATCCACCAAACCAGAATATACCACGACAAGCAATAAAGCCCAACCCCCTACAAATGGCTTTCTTGGCTCAACAAGCCATA
AAACAGTGGCAGATCAGCAGTGGACAGGGTGCCCCATCAACTACCAACAGCACATCCTCTACTCCTTCCAGCCCCACGAT
TACTAGTGCAGCAGGATATGATGGAAAGGCTTTTGGTTCACCTATGATCGATTTAAGCTCACCAGTGGGAGGTTCTTATA
ATCTTCCCTCTCTTCCAGATATTGACTGTTCAAGTACTATTATGCTGGACAGCATTGTGAGGAAAGATACTAATATAGAT
CATGGCCAGCCAAGACCACCCTCAAACAGAACGGTCCAGTCACCAAATTCCTCAGTGCCATCTCCAGGCCTAGCAGGACC
TGTTACTATGACTAGTGTACACCCCCCAATACGTTCACCGAGTGCCTCCAGCGTTGGAAGCCGAGGAAGCTCTGGCTCTT
CCAGCAAACCAGCAGGAGCTGATTCTACACACAAAGTCCCAGTGGTAATGTTGGAGCCAATTCGAATAAAACAAGAAAAC
AGTGGACCACCTGAAAATTATGATTTCCCTGTTGTTATAGTGAAGCAAGAATCAGATGAAGAATCCAGGCCTCAAAATGC
CAATTATCCAAGAAGCATACTCACCTCCCTGCTCTTAAATAGCAGTCAGAGCTCTACTTCTGAGGAGACTGTGCTAAGAT
CAGATGCCCCTGATAGTACAGGAGATCAACCTGGACTTCAGCAGGAGAATTCCTCGAATGGAAAGTCTGAGTGGCTGGAT
CCTTCCCAGAAGTCACCCCTTCACGTTGGAGAGACAAGGAAAGAGGATGACCCAAATGAGGACTGGTGTGCAGTTTGTCA
AAACGGAGGGGAACTCCTGTGCTGTGAAAAGTGCCCCAAAGTATTCCATCTTTCTTGTCATGTGCCCACACTGACAAATT
TTCCAAGTGGAGAGTGGATTTGCACTTTCTGCCGAGACTTATCTAAACCAGAAGTTGAATATGATTGTGATGCTCCCAGT
CACAACTCAGAAAAAAGGAAAACTGAAGGCCTTGTTAAATTAACACCTATAGATAAAAGGAAGTGTGAGCGCCTACTTTT
ATTTCTTTACTGCCATGAAATGAGCCTGGCTTTTCAAGACCCTGTTCCTCTAACTGTAAGTCCAGACTTCAAAAATACAA
AAAAGCCGATGGATTTGTCAACCATCAAGAAGAGACTACAAGAAGATTATTCCATGTACTCAAAACCTGAAGATTTTGTA
GCTGATTTTAGATTGATCTTTCAAAACTGTGCTGAATTCAATGAGCCTGATTCAGAAGTAGCTAATGCTGGTATAAAACT
TGAAAATTATTTTGAAGAACTTCTAAAGAACCTCTATCCAGAAAAAAGGTTTCCTAAACCAGAATTCAGGAATGAATCAG
AAGATAATAAATACAGTGATGATTCAGATGATGACTTTGTACAGCCCCGAAAGAAACGCCTCAAAAGCATTGAAGAACGC
CAGTTGCTTAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 11 .76 RPM |
| SRP051959_skeletal_muscle | 6 .75 RPM |
| SRP051959_lymph_node | 12 .85 RPM |
| SRP051959_lung | 16 .32 RPM |
| SRP051959_liver | 14 .95 RPM |
| SRP051959_kidney | 23 .05 RPM |
| SRP051959_heart | 14 .40 RPM |
| SRP051959_colon | 22 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000006533 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3923 | 91.10 | 77.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000012885 retrocopies